RNA–Protein interactions for RNA: ENST00000487600.1

NKRF-203, Transcript of NFKB repressing factor, humanhuman

TSL 5

Gene NKRF, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-203ENST00000487600 A6NJY4 79 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 CDK2AP1O14519 115 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 BACH1O14867 736 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 ARAFP10398 606 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
NKRF-203ENST00000487600 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 SPOCK3Q9BQ16 436 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 CABP1Q9NZU7 370 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 NOD1Q9Y239 953 aa11.88□□□□□ -0.51
NKRF-203ENST00000487600 C2CD2LO14523 706 aa11.87□□□□□ -0.51
NKRF-203ENST00000487600 ZDHHC3Q9NYG2 299 aa11.87□□□□□ -0.51
NKRF-203ENST00000487600 A0A1W2PNR3 127 aa11.86□□□□□ -0.51
NKRF-203ENST00000487600 SKIP12755 728 aa11.86□□□□□ -0.51
NKRF-203ENST00000487600 ATP4AP20648 1035 aa11.86□□□□□ -0.51
NKRF-203ENST00000487600 TMEM229AB2RXF0 380 aa11.85□□□□□ -0.51
NKRF-203ENST00000487600 PSME1Q06323 249 aa11.85□□□□□ -0.51
NKRF-203ENST00000487600 MTFR1Q15390 333 aa11.85□□□□□ -0.51
NKRF-203ENST00000487600 DNAAF2Q9NVR5 837 aaKnown RBP11.85□□□□□ -0.51
NKRF-203ENST00000487600 COG6Q9Y2V7 657 aa11.84□□□□□ -0.51
NKRF-203ENST00000487600 NEURL1BA8MQ27 555 aa11.83□□□□□ -0.52
NKRF-203ENST00000487600 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
NKRF-203ENST00000487600 EPXP11678 715 aa11.83□□□□□ -0.52
NKRF-203ENST00000487600 BICDL1Q6ZP65 573 aa11.83□□□□□ -0.52
NKRF-203ENST00000487600 PCDHGA11Q9Y5H2 935 aa11.83□□□□□ -0.52
NKRF-203ENST00000487600 DCDC2BA2VCK2 349 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 PIK3CDO00329 1044 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 GNB5O14775 395 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 RAD21O60216 631 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 MAPTP10636 758 aaKnown RBP11.82□□□□□ -0.52
NKRF-203ENST00000487600 GRIN2CQ14957 1233 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 BTBD6Q96KE9 485 aa11.82□□□□□ -0.52
NKRF-203ENST00000487600 ADH6P28332 368 aa11.81□□□□□ -0.52
NKRF-203ENST00000487600 GTF2IP78347 998 aa11.81□□□□□ -0.52
NKRF-203ENST00000487600 TNP2Q05952 138 aa11.81□□□□□ -0.52
NKRF-203ENST00000487600 AVENQ9NQS1 362 aaPredicted RBP11.81□□□□□ -0.52
NKRF-203ENST00000487600 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
NKRF-203ENST00000487600 NOP53Q9NZM5 478 aaKnown RBP11.8□□□□□ -0.52
NKRF-203ENST00000487600 PRR12Q9ULL5 1215 aa11.8□□□□□ -0.52
NKRF-203ENST00000487600 KRBA1A5PL33 1030 aa11.79□□□□□ -0.52
NKRF-203ENST00000487600 PROCP04070 461 aa11.79□□□□□ -0.52
NKRF-203ENST00000487600 ITGB2P05107 769 aa11.79□□□□□ -0.52
NKRF-203ENST00000487600 CD33P20138 364 aa11.79□□□□□ -0.52
NKRF-203ENST00000487600 ZIC5Q96T25 663 aa11.79□□□□□ -0.52
NKRF-203ENST00000487600 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
NKRF-203ENST00000487600 NCOA4Q13772 614 aa11.78□□□□□ -0.52
NKRF-203ENST00000487600 LINC00114Q6XXX2 140 aa11.78□□□□□ -0.52
NKRF-203ENST00000487600 ALG2Q9H553 416 aa11.78□□□□□ -0.52
NKRF-203ENST00000487600 NEUROD4Q9HD90 331 aa11.78□□□□□ -0.52
NKRF-203ENST00000487600 ADAM23O75077 832 aa11.77□□□□□ -0.53
NKRF-203ENST00000487600 TRIM50Q86XT4 487 aa11.77□□□□□ -0.53
NKRF-203ENST00000487600 MARK1Q9P0L2 795 aa11.77□□□□□ -0.53
NKRF-203ENST00000487600 COL8A1P27658 744 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 LAMC2Q13753 1193 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 SAMD5Q5TGI4 173 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 CHSY3Q70JA7 882 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
NKRF-203ENST00000487600 ZNF358Q9NW07 568 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 SCHIP1Q9P0W5 487 aaPredicted RBP11.76□□□□□ -0.53
NKRF-203ENST00000487600 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 USP3Q9Y6I4 520 aa11.76□□□□□ -0.53
NKRF-203ENST00000487600 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
NKRF-203ENST00000487600 SUV39H2Q9H5I1 410 aa11.74□□□□□ -0.53
NKRF-203ENST00000487600 ZNF232Q9UNY5 417 aa11.74□□□□□ -0.53
NKRF-203ENST00000487600 HOXB4P17483 251 aaPredicted RBP11.73□□□□□ -0.53
NKRF-203ENST00000487600 BAG6P46379 1132 aa11.73□□□□□ -0.53
NKRF-203ENST00000487600 DGKGP49619 791 aa11.73□□□□□ -0.53
NKRF-203ENST00000487600 TEAD4Q15561 434 aa11.73□□□□□ -0.53
NKRF-203ENST00000487600 ZNF468Q5VIY5 522 aaPredicted RBP11.73□□□□□ -0.53
NKRF-203ENST00000487600 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
NKRF-203ENST00000487600 K7ELQ4 463 aaPredicted RBP11.72□□□□□ -0.53
NKRF-203ENST00000487600 NOS2P35228 1153 aa11.72□□□□□ -0.53
NKRF-203ENST00000487600 ATP1A2P50993 1020 aa11.72□□□□□ -0.53
NKRF-203ENST00000487600 FLIIQ13045 1269 aa11.72□□□□□ -0.53
NKRF-203ENST00000487600 DEPDC4Q8N2C3 294 aa11.72□□□□□ -0.53
NKRF-203ENST00000487600 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
NKRF-203ENST00000487600 GPC6Q9Y625 555 aaPredicted RBP11.72□□□□□ -0.53
NKRF-203ENST00000487600 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
NKRF-203ENST00000487600 ALAS2P22557 587 aa11.71□□□□□ -0.53
NKRF-203ENST00000487600 TXLNAP40222 546 aa11.71□□□□□ -0.53
NKRF-203ENST00000487600 FCHSD1Q86WN1 690 aa11.71□□□□□ -0.53
NKRF-203ENST00000487600 SLC9A9Q8IVB4 645 aa11.71□□□□□ -0.53
NKRF-203ENST00000487600 PCBP4P57723 403 aaKnown RBP11.7□□□□□ -0.54
NKRF-203ENST00000487600 SERTM1A2A2V5 107 aa11.69□□□□□ -0.54
NKRF-203ENST00000487600 LRRC69Q6ZNQ3 347 aa11.69□□□□□ -0.54
NKRF-203ENST00000487600 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
NKRF-203ENST00000487600 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
NKRF-203ENST00000487600 KLF15Q9UIH9 416 aa11.69□□□□□ -0.54
NKRF-203ENST00000487600 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
NKRF-203ENST00000487600 EFSO43281 561 aa11.68□□□□□ -0.54
NKRF-203ENST00000487600 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
NKRF-203ENST00000487600 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
NKRF-203ENST00000487600 PLEKHM2Q8IWE5 1019 aa11.67□□□□□ -0.54
NKRF-203ENST00000487600 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
NKRF-203ENST00000487600 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
NKRF-203ENST00000487600 C1QTNF9BB2RNN3 333 aa11.66□□□□□ -0.54
NKRF-203ENST00000487600 EML1O00423 815 aa11.66□□□□□ -0.54
NKRF-203ENST00000487600 EPHA4P54764 986 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms