RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 NFATC2IPQ8NCF5 419 aa14.05□□□□□ -0.16
TOP3B-216ENST00000487485 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-216ENST00000487485 DPEP1P16444 411 aa14.04□□□□□ -0.16
TOP3B-216ENST00000487485 HTRA3P83110 453 aa14.04□□□□□ -0.16
TOP3B-216ENST00000487485 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
TOP3B-216ENST00000487485 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
TOP3B-216ENST00000487485 CICQ96RK0 1608 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-216ENST00000487485 NLGN1Q8N2Q7 840 aa14.03□□□□□ -0.16
TOP3B-216ENST00000487485 ARHGEF1Q92888 912 aaKnown RBP14.03□□□□□ -0.16
TOP3B-216ENST00000487485 SLC4A9Q96Q91 983 aa14.03□□□□□ -0.16
TOP3B-216ENST00000487485 SLC52A2Q9HAB3 445 aa14.03□□□□□ -0.16
TOP3B-216ENST00000487485 SIPA1L3O60292 1781 aaPredicted RBP14.03□□□□□ -0.16
TOP3B-216ENST00000487485 KIF13BQ9NQT8 1826 aa14.02□□□□□ -0.16
TOP3B-216ENST00000487485 CEMIPQ8WUJ3 1361 aa14.02□□□□□ -0.17
TOP3B-216ENST00000487485 LMOD3Q0VAK6 560 aa14.02□□□□□ -0.17
TOP3B-216ENST00000487485 TEFQ10587 303 aa14.02□□□□□ -0.17
TOP3B-216ENST00000487485 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.17
TOP3B-216ENST00000487485 RTCBQ9Y3I0 505 aaKnown RBP14.02□□□□□ -0.17
TOP3B-216ENST00000487485 KIAA1551Q9HCM1 1747 aa14.01□□□□□ -0.17
TOP3B-216ENST00000487485 KCNA3P22001 575 aa14.01□□□□□ -0.17
TOP3B-216ENST00000487485 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
TOP3B-216ENST00000487485 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
TOP3B-216ENST00000487485 PCNTO95613 3336 aa14□□□□□ -0.17
TOP3B-216ENST00000487485 MRC1P22897 1456 aa14□□□□□ -0.17
TOP3B-216ENST00000487485 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
TOP3B-216ENST00000487485 GYS1P13807 737 aa14□□□□□ -0.17
TOP3B-216ENST00000487485 COL13A1Q5TAT6 717 aaPredicted RBP14□□□□□ -0.17
TOP3B-216ENST00000487485 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
TOP3B-216ENST00000487485 THUMPD2Q9BTF0 503 aaKnown RBP14□□□□□ -0.17
TOP3B-216ENST00000487485 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
TOP3B-216ENST00000487485 SALL2Q9Y467 1007 aaPredicted RBP14□□□□□ -0.17
TOP3B-216ENST00000487485 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
TOP3B-216ENST00000487485 KLRG1Q96E93 195 aa13.99□□□□□ -0.17
TOP3B-216ENST00000487485 RPS6KA4O75676 772 aa13.98□□□□□ -0.17
TOP3B-216ENST00000487485 RFC4P35249 363 aa13.98□□□□□ -0.17
TOP3B-216ENST00000487485 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
TOP3B-216ENST00000487485 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
TOP3B-216ENST00000487485 PARP3Q9Y6F1 533 aa13.98□□□□□ -0.17
TOP3B-216ENST00000487485 MYH14Q7Z406 1995 aaKnown RBP13.97□□□□□ -0.17
TOP3B-216ENST00000487485 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
TOP3B-216ENST00000487485 ADRA2BP18089 450 aa13.97□□□□□ -0.17
TOP3B-216ENST00000487485 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
TOP3B-216ENST00000487485 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
TOP3B-216ENST00000487485 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
TOP3B-216ENST00000487485 JMYQ8N9B5 988 aa13.97□□□□□ -0.17
TOP3B-216ENST00000487485 CNTNAP4Q9C0A0 1308 aa13.96□□□□□ -0.17
TOP3B-216ENST00000487485 BRCA1P38398 1863 aaKnown RBP13.96□□□□□ -0.17
TOP3B-216ENST00000487485 FSTL1Q12841 308 aa13.96□□□□□ -0.17
TOP3B-216ENST00000487485 WWC1Q8IX03 1113 aa13.96□□□□□ -0.17
TOP3B-216ENST00000487485 RRAGCQ9HB90 399 aa13.96□□□□□ -0.17
TOP3B-216ENST00000487485 PIM2Q9P1W9 311 aa13.96□□□□□ -0.17
TOP3B-216ENST00000487485 CAPN15O75808 1086 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 TTC5Q8N0Z6 440 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 MIS18AQ9NYP9 233 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 RNF181Q9P0P0 153 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 SRP68Q9UHB9 627 aaKnown RBP13.95□□□□□ -0.18
TOP3B-216ENST00000487485 UBR2Q8IWV8 1755 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 WDR90Q96KV7 1748 aa13.95□□□□□ -0.18
TOP3B-216ENST00000487485 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
TOP3B-216ENST00000487485 PTCD1O75127 700 aaKnown RBP13.94□□□□□ -0.18
TOP3B-216ENST00000487485 CHRNA5P30532 468 aa13.94□□□□□ -0.18
TOP3B-216ENST00000487485 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
TOP3B-216ENST00000487485 DDR1Q08345 913 aa13.94□□□□□ -0.18
TOP3B-216ENST00000487485 FKBP8Q14318 412 aa13.94□□□□□ -0.18
TOP3B-216ENST00000487485 DALRD3Q5D0E6 543 aaKnown RBP13.94□□□□□ -0.18
TOP3B-216ENST00000487485 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
TOP3B-216ENST00000487485 KCPQ6ZWJ8 1503 aa13.94□□□□□ -0.18
TOP3B-216ENST00000487485 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
TOP3B-216ENST00000487485 ARFGEF1Q9Y6D6 1849 aa13.93□□□□□ -0.18
TOP3B-216ENST00000487485 KCNQ3O43525 872 aa13.93□□□□□ -0.18
TOP3B-216ENST00000487485 ZNF831Q5JPB2 1677 aa13.92□□□□□ -0.18
TOP3B-216ENST00000487485 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
TOP3B-216ENST00000487485 BABAM1Q9NWV8 329 aa13.92□□□□□ -0.18
TOP3B-216ENST00000487485 TSPYL4Q9UJ04 414 aa13.92□□□□□ -0.18
TOP3B-216ENST00000487485 SBF1O95248 1867 aa13.91□□□□□ -0.18
TOP3B-216ENST00000487485 CHL1O00533 1208 aa13.91□□□□□ -0.18
TOP3B-216ENST00000487485 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
TOP3B-216ENST00000487485 GNAI1P63096 354 aa13.91□□□□□ -0.18
TOP3B-216ENST00000487485 WDR63Q8IWG1 891 aa13.91□□□□□ -0.18
TOP3B-216ENST00000487485 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
TOP3B-216ENST00000487485 ZNF496Q96IT1 587 aaPredicted RBP13.91□□□□□ -0.18
TOP3B-216ENST00000487485 ZNF853P0CG23 659 aa13.9□□□□□ -0.18
TOP3B-216ENST00000487485 HNRNPUQ00839 825 aaKnown RBP eCLIP13.9□□□□□ -0.18
TOP3B-216ENST00000487485 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
TOP3B-216ENST00000487485 IFT57Q9NWB7 429 aa13.9□□□□□ -0.18
TOP3B-216ENST00000487485 COL5A3P25940 1745 aaPredicted RBP13.9□□□□□ -0.18
TOP3B-216ENST00000487485 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.19
TOP3B-216ENST00000487485 TM4SF1P30408 202 aa13.89□□□□□ -0.19
TOP3B-216ENST00000487485 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
TOP3B-216ENST00000487485 SMC1BQ8NDV3 1235 aa13.89□□□□□ -0.19
TOP3B-216ENST00000487485 MBIPQ9NS73 344 aa13.89□□□□□ -0.19
TOP3B-216ENST00000487485 TJP1Q07157 1748 aa13.89□□□□□ -0.19
TOP3B-216ENST00000487485 IL16Q14005 1332 aa13.89□□□□□ -0.19
TOP3B-216ENST00000487485 ZNF521Q96K83 1311 aa13.89□□□□□ -0.19
TOP3B-216ENST00000487485 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
TOP3B-216ENST00000487485 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
TOP3B-216ENST00000487485 PRELPP51888 382 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms