RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 ZPR1O75312 459 aa16.53■□□□□ 0.24
ITSN1-229ENST00000487427 MCM10Q7L590 875 aa16.53■□□□□ 0.24
ITSN1-229ENST00000487427 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
ITSN1-229ENST00000487427 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
ITSN1-229ENST00000487427 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.24
ITSN1-229ENST00000487427 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.24
ITSN1-229ENST00000487427 FKBP8Q14318 412 aa16.52■□□□□ 0.24
ITSN1-229ENST00000487427 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
ITSN1-229ENST00000487427 ZBTB1Q9Y2K1 713 aa16.52■□□□□ 0.24
ITSN1-229ENST00000487427 KCNQ3O43525 872 aa16.51■□□□□ 0.23
ITSN1-229ENST00000487427 CANXP27824 592 aaKnown RBP16.51■□□□□ 0.23
ITSN1-229ENST00000487427 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
ITSN1-229ENST00000487427 TGFB2P61812 414 aa16.51■□□□□ 0.23
ITSN1-229ENST00000487427 NARFQ9UHQ1 456 aa16.51■□□□□ 0.23
ITSN1-229ENST00000487427 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
ITSN1-229ENST00000487427 TM4SF1P30408 202 aa16.5■□□□□ 0.23
ITSN1-229ENST00000487427 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
ITSN1-229ENST00000487427 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
ITSN1-229ENST00000487427 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
ITSN1-229ENST00000487427 TJP1Q07157 1748 aa16.5■□□□□ 0.23
ITSN1-229ENST00000487427 A0A087WZG4 1122 aa16.49■□□□□ 0.23
ITSN1-229ENST00000487427 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
ITSN1-229ENST00000487427 COL15A1P39059 1388 aa16.49■□□□□ 0.23
ITSN1-229ENST00000487427 MYBBP1AQ9BQG0 1328 aaKnown RBP16.48■□□□□ 0.23
ITSN1-229ENST00000487427 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
ITSN1-229ENST00000487427 ZNF784Q8NCA9 323 aaPredicted RBP16.48■□□□□ 0.23
ITSN1-229ENST00000487427 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
ITSN1-229ENST00000487427 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
ITSN1-229ENST00000487427 DDR1Q08345 913 aa16.47■□□□□ 0.23
ITSN1-229ENST00000487427 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
ITSN1-229ENST00000487427 POLRMTO00411 1230 aaKnown RBP16.46■□□□□ 0.23
ITSN1-229ENST00000487427 A1BGP04217 495 aa16.46■□□□□ 0.23
ITSN1-229ENST00000487427 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
ITSN1-229ENST00000487427 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.23
ITSN1-229ENST00000487427 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
ITSN1-229ENST00000487427 C10orf71Q711Q0 1435 aa16.45■□□□□ 0.22
ITSN1-229ENST00000487427 NFIXQ14938 502 aa16.45■□□□□ 0.22
ITSN1-229ENST00000487427 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
ITSN1-229ENST00000487427 BCL2L12Q9HB09 334 aa16.45■□□□□ 0.22
ITSN1-229ENST00000487427 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
ITSN1-229ENST00000487427 DPEP1P16444 411 aa16.44■□□□□ 0.22
ITSN1-229ENST00000487427 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
ITSN1-229ENST00000487427 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
ITSN1-229ENST00000487427 PXDNLA1KZ92 1463 aa16.43■□□□□ 0.22
ITSN1-229ENST00000487427 UTRNP46939 3433 aa16.43■□□□□ 0.22
ITSN1-229ENST00000487427 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
ITSN1-229ENST00000487427 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
ITSN1-229ENST00000487427 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
ITSN1-229ENST00000487427 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
ITSN1-229ENST00000487427 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
ITSN1-229ENST00000487427 PRAMEF22A3QJZ6 481 aa16.42■□□□□ 0.22
ITSN1-229ENST00000487427 KCNA3P22001 575 aa16.42■□□□□ 0.22
ITSN1-229ENST00000487427 RIPK4P57078 832 aa16.42■□□□□ 0.22
ITSN1-229ENST00000487427 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
ITSN1-229ENST00000487427 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
ITSN1-229ENST00000487427 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
ITSN1-229ENST00000487427 SERPINB2P05120 415 aa16.41■□□□□ 0.22
ITSN1-229ENST00000487427 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
ITSN1-229ENST00000487427 BCS1LQ9Y276 419 aa16.41■□□□□ 0.22
ITSN1-229ENST00000487427 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
ITSN1-229ENST00000487427 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
ITSN1-229ENST00000487427 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
ITSN1-229ENST00000487427 CHD4Q14839 1912 aa16.39■□□□□ 0.21
ITSN1-229ENST00000487427 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
ITSN1-229ENST00000487427 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
ITSN1-229ENST00000487427 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.21
ITSN1-229ENST00000487427 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
ITSN1-229ENST00000487427 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
ITSN1-229ENST00000487427 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
ITSN1-229ENST00000487427 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
ITSN1-229ENST00000487427 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
ITSN1-229ENST00000487427 RUNDC1Q96C34 613 aa16.38■□□□□ 0.21
ITSN1-229ENST00000487427 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
ITSN1-229ENST00000487427 NBPF26B4DH59 902 aa16.37■□□□□ 0.21
ITSN1-229ENST00000487427 CHRNA5P30532 468 aa16.37■□□□□ 0.21
ITSN1-229ENST00000487427 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
ITSN1-229ENST00000487427 NBPF10Q6P3W6 841 aaKnown RBP16.37■□□□□ 0.21
ITSN1-229ENST00000487427 CLEC4GQ6UXB4 293 aa16.37■□□□□ 0.21
ITSN1-229ENST00000487427 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
ITSN1-229ENST00000487427 SETDB2Q96T68 719 aa16.37■□□□□ 0.21
ITSN1-229ENST00000487427 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
ITSN1-229ENST00000487427 KIF13BQ9NQT8 1826 aa16.36■□□□□ 0.21
ITSN1-229ENST00000487427 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
ITSN1-229ENST00000487427 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
ITSN1-229ENST00000487427 RGL2O15211 777 aa16.35■□□□□ 0.21
ITSN1-229ENST00000487427 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
ITSN1-229ENST00000487427 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
ITSN1-229ENST00000487427 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
ITSN1-229ENST00000487427 ZNF652Q9Y2D9 606 aa16.34■□□□□ 0.21
ITSN1-229ENST00000487427 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
ITSN1-229ENST00000487427 CARMIL3Q8ND23 1372 aa16.34■□□□□ 0.21
ITSN1-229ENST00000487427 H0YIN7 160 aa16.33■□□□□ 0.2
ITSN1-229ENST00000487427 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
ITSN1-229ENST00000487427 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
ITSN1-229ENST00000487427 PDE6BP35913 854 aa16.32■□□□□ 0.2
ITSN1-229ENST00000487427 PRR5LQ6MZQ0 368 aa16.32■□□□□ 0.2
ITSN1-229ENST00000487427 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
ITSN1-229ENST00000487427 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
ITSN1-229ENST00000487427 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
ITSN1-229ENST00000487427 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms