RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRIM56-204ENST00000487252 ERFEQ4G0M1 354 aa16.64■□□□□ 0.25
TRIM56-204ENST00000487252 LTBP1Q14766 1721 aa16.63■□□□□ 0.25
TRIM56-204ENST00000487252 DDNO94850 711 aaPredicted RBP16.63■□□□□ 0.25
TRIM56-204ENST00000487252 L3MBTL3Q96JM7 780 aaPredicted RBP16.63■□□□□ 0.25
TRIM56-204ENST00000487252 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
TRIM56-204ENST00000487252 MCOLN1Q9GZU1 580 aa16.63■□□□□ 0.25
TRIM56-204ENST00000487252 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
TRIM56-204ENST00000487252 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
TRIM56-204ENST00000487252 ROCK2O75116 1388 aaKnown RBP16.63■□□□□ 0.25
TRIM56-204ENST00000487252 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
TRIM56-204ENST00000487252 FLT4P35916 1363 aa16.62■□□□□ 0.25
TRIM56-204ENST00000487252 TONSLQ96HA7 1378 aa16.62■□□□□ 0.25
TRIM56-204ENST00000487252 IQCA1LA6NCM1 817 aa16.61■□□□□ 0.25
TRIM56-204ENST00000487252 PHKG2P15735 406 aa16.61■□□□□ 0.25
TRIM56-204ENST00000487252 PRPF38BQ5VTL8 546 aaKnown RBP16.61■□□□□ 0.25
TRIM56-204ENST00000487252 LTBP3Q9NS15 1303 aa16.61■□□□□ 0.25
TRIM56-204ENST00000487252 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
TRIM56-204ENST00000487252 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
TRIM56-204ENST00000487252 CFAP44Q96MT7 982 aa16.59■□□□□ 0.25
TRIM56-204ENST00000487252 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
TRIM56-204ENST00000487252 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.24
TRIM56-204ENST00000487252 TJP1Q07157 1748 aa16.56■□□□□ 0.24
TRIM56-204ENST00000487252 ERVV-2B6SEH9 535 aa16.56■□□□□ 0.24
TRIM56-204ENST00000487252 C2CD5Q86YS7 1000 aa16.56■□□□□ 0.24
TRIM56-204ENST00000487252 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
TRIM56-204ENST00000487252 CASP8AP2Q9UKL3 1982 aa16.56■□□□□ 0.24
TRIM56-204ENST00000487252 FYB1O15117 783 aa16.55■□□□□ 0.24
TRIM56-204ENST00000487252 NFIXQ14938 502 aa16.55■□□□□ 0.24
TRIM56-204ENST00000487252 CAPNS2Q96L46 248 aa16.55■□□□□ 0.24
TRIM56-204ENST00000487252 H0YIN7 160 aa16.54■□□□□ 0.24
TRIM56-204ENST00000487252 CNTROBQ8N137 903 aa16.54■□□□□ 0.24
TRIM56-204ENST00000487252 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
TRIM56-204ENST00000487252 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
TRIM56-204ENST00000487252 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
TRIM56-204ENST00000487252 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
TRIM56-204ENST00000487252 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
TRIM56-204ENST00000487252 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
TRIM56-204ENST00000487252 TSKSQ9UJT2 592 aa16.53■□□□□ 0.24
TRIM56-204ENST00000487252 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
TRIM56-204ENST00000487252 CA12O43570 354 aa16.52■□□□□ 0.24
TRIM56-204ENST00000487252 C21orf2O43822 256 aa16.52■□□□□ 0.24
TRIM56-204ENST00000487252 MAP2K2P36507 400 aa16.52■□□□□ 0.24
TRIM56-204ENST00000487252 ECE1P42892 770 aa16.52■□□□□ 0.24
TRIM56-204ENST00000487252 SERPINB2P05120 415 aa16.51■□□□□ 0.23
TRIM56-204ENST00000487252 DGKZQ13574 1117 aa16.51■□□□□ 0.23
TRIM56-204ENST00000487252 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
TRIM56-204ENST00000487252 GGNBP2Q9H3C7 697 aa16.51■□□□□ 0.23
TRIM56-204ENST00000487252 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRIM56-204ENST00000487252 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
TRIM56-204ENST00000487252 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
TRIM56-204ENST00000487252 ZPR1O75312 459 aa16.5■□□□□ 0.23
TRIM56-204ENST00000487252 EAPPQ56P03 285 aaPredicted RBP16.5■□□□□ 0.23
TRIM56-204ENST00000487252 PNMA8AQ86V59 439 aaPredicted RBP16.5■□□□□ 0.23
TRIM56-204ENST00000487252 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
TRIM56-204ENST00000487252 SOS1Q07889 1333 aaPredicted RBP16.49■□□□□ 0.23
TRIM56-204ENST00000487252 EPHX2P34913 555 aa16.49■□□□□ 0.23
TRIM56-204ENST00000487252 CYP4F22Q6NT55 531 aa16.49■□□□□ 0.23
TRIM56-204ENST00000487252 EYA1Q99502 592 aa16.49■□□□□ 0.23
TRIM56-204ENST00000487252 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
TRIM56-204ENST00000487252 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
TRIM56-204ENST00000487252 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
TRIM56-204ENST00000487252 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
TRIM56-204ENST00000487252 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
TRIM56-204ENST00000487252 ARFGEF2Q9Y6D5 1785 aa16.47■□□□□ 0.23
TRIM56-204ENST00000487252 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
TRIM56-204ENST00000487252 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.23
TRIM56-204ENST00000487252 EMILIN1Q9Y6C2 1016 aa16.46■□□□□ 0.23
TRIM56-204ENST00000487252 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
TRIM56-204ENST00000487252 SOX10P56693 466 aa16.45■□□□□ 0.22
TRIM56-204ENST00000487252 CST9Q5W186 159 aa16.45■□□□□ 0.22
TRIM56-204ENST00000487252 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRIM56-204ENST00000487252 BRIP1Q9BX63 1249 aa16.45■□□□□ 0.22
TRIM56-204ENST00000487252 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
TRIM56-204ENST00000487252 TLL2Q9Y6L7 1015 aa16.45■□□□□ 0.22
TRIM56-204ENST00000487252 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
TRIM56-204ENST00000487252 AOC2O75106 756 aa16.44■□□□□ 0.22
TRIM56-204ENST00000487252 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
TRIM56-204ENST00000487252 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
TRIM56-204ENST00000487252 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
TRIM56-204ENST00000487252 FMR1Q06787 632 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRIM56-204ENST00000487252 SOGA3Q5TF21 947 aa16.43■□□□□ 0.22
TRIM56-204ENST00000487252 COL15A1P39059 1388 aa16.42■□□□□ 0.22
TRIM56-204ENST00000487252 PDE6BP35913 854 aa16.42■□□□□ 0.22
TRIM56-204ENST00000487252 CABP4P57796 275 aa16.42■□□□□ 0.22
TRIM56-204ENST00000487252 GCC1Q96CN9 775 aa16.42■□□□□ 0.22
TRIM56-204ENST00000487252 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
TRIM56-204ENST00000487252 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
TRIM56-204ENST00000487252 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
TRIM56-204ENST00000487252 C7orf43Q8WVR3 580 aa16.41■□□□□ 0.22
TRIM56-204ENST00000487252 TESK2Q96S53 571 aa16.41■□□□□ 0.22
TRIM56-204ENST00000487252 GRM1Q13255 1194 aa16.4■□□□□ 0.22
TRIM56-204ENST00000487252 PRPF40BQ6NWY9 871 aaKnown RBP16.4■□□□□ 0.22
TRIM56-204ENST00000487252 CNKSR1Q969H4 720 aa16.4■□□□□ 0.22
TRIM56-204ENST00000487252 HHIPL1Q96JK4 782 aa16.4■□□□□ 0.22
TRIM56-204ENST00000487252 CARD11Q9BXL7 1154 aa16.4■□□□□ 0.22
TRIM56-204ENST00000487252 FZD9O00144 591 aa16.39■□□□□ 0.21
TRIM56-204ENST00000487252 CYP19A1P11511 503 aaPredicted RBP16.39■□□□□ 0.21
TRIM56-204ENST00000487252 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
TRIM56-204ENST00000487252 SAPCD2Q86UD0 394 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms