RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 ZMYND15Q9H091 742 aa8.38□□□□□ -1.07
CAPN2-209ENST00000487223 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
CAPN2-209ENST00000487223 GPR162Q16538 588 aa8.37□□□□□ -1.07
CAPN2-209ENST00000487223 PLEKHO1Q53GL0 409 aaPredicted RBP8.37□□□□□ -1.07
CAPN2-209ENST00000487223 NUTM2GQ5VZR2 741 aa8.37□□□□□ -1.07
CAPN2-209ENST00000487223 BRPF3Q9ULD4 1205 aa8.37□□□□□ -1.07
CAPN2-209ENST00000487223 KAT6BQ8WYB5 2073 aa8.36□□□□□ -1.07
CAPN2-209ENST00000487223 PRIM1P49642 420 aaKnown RBP8.36□□□□□ -1.07
CAPN2-209ENST00000487223 NBPF6Q5VWK0 638 aa8.36□□□□□ -1.07
CAPN2-209ENST00000487223 NBPF4Q96M43 638 aa8.36□□□□□ -1.07
CAPN2-209ENST00000487223 RNF123Q5XPI4 1314 aa8.36□□□□□ -1.07
CAPN2-209ENST00000487223 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 LRRC37AA6NMS7 1700 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 KIF3CO14782 793 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 LAMB2P55268 1798 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 SIK1P57059 783 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 TMOD3Q9NYL9 352 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
CAPN2-209ENST00000487223 HTATSF1O43719 755 aaKnown RBP8.34□□□□□ -1.07
CAPN2-209ENST00000487223 SLC12A5Q9H2X9 1139 aa8.34□□□□□ -1.07
CAPN2-209ENST00000487223 USP35Q9P2H5 1018 aa8.34□□□□□ -1.07
CAPN2-209ENST00000487223 ANKRD31Q8N7Z5 1873 aa8.34□□□□□ -1.07
CAPN2-209ENST00000487223 SENP3-EIF4A1A0A087X0R7 540 aa8.34□□□□□ -1.07
CAPN2-209ENST00000487223 CYP27B1O15528 508 aa8.34□□□□□ -1.07
CAPN2-209ENST00000487223 YBX3P16989 372 aaKnown RBP eCLIP8.34□□□□□ -1.076e-8■■■■■ 30.8
CAPN2-209ENST00000487223 USP42Q9H9J4 1324 aaKnown RBP8.33□□□□□ -1.08
CAPN2-209ENST00000487223 SMC1BQ8NDV3 1235 aa8.33□□□□□ -1.08
CAPN2-209ENST00000487223 RNF25Q96BH1 459 aaPredicted RBP8.33□□□□□ -1.08
CAPN2-209ENST00000487223 ANKRD36CQ5JPF3 1778 aa8.33□□□□□ -1.08
CAPN2-209ENST00000487223 TM4SF1P30408 202 aa8.33□□□□□ -1.08
CAPN2-209ENST00000487223 AKAP4Q5JQC9 854 aa8.33□□□□□ -1.08
CAPN2-209ENST00000487223 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
CAPN2-209ENST00000487223 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
CAPN2-209ENST00000487223 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
CAPN2-209ENST00000487223 COL11A2P13942 1736 aaPredicted RBP8.32□□□□□ -1.08
CAPN2-209ENST00000487223 PTF1AQ7RTS3 328 aa8.32□□□□□ -1.08
CAPN2-209ENST00000487223 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
CAPN2-209ENST00000487223 STYK1Q6J9G0 422 aa8.32□□□□□ -1.08
CAPN2-209ENST00000487223 PIGBQ92521 554 aa8.32□□□□□ -1.08
CAPN2-209ENST00000487223 PRDM10Q9NQV6 1147 aa8.32□□□□□ -1.08
CAPN2-209ENST00000487223 LINC00116Q8NCU8 138 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 ATG3Q9NT62 314 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 BABAM1Q9NWV8 329 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 CDHR2Q9BYE9 1310 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 DNAJC5GQ8N7S2 189 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 KLRG2A4D1S0 409 aaPredicted RBP8.31□□□□□ -1.08
CAPN2-209ENST00000487223 MMP14P50281 582 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 CC2D2BQ6DHV5 1058 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 KLRG1Q96E93 195 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 PARP3Q9Y6F1 533 aa8.31□□□□□ -1.08
CAPN2-209ENST00000487223 ST20-MTHFSA0A0A6YYL1 179 aa8.3□□□□□ -1.08
CAPN2-209ENST00000487223 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
CAPN2-209ENST00000487223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.3□□□□□ -1.08
CAPN2-209ENST00000487223 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
CAPN2-209ENST00000487223 PCDH10Q9P2E7 1040 aa8.3□□□□□ -1.08
CAPN2-209ENST00000487223 POLKQ9UBT6 870 aa8.3□□□□□ -1.08
CAPN2-209ENST00000487223 MYH14Q7Z406 1995 aaKnown RBP8.29□□□□□ -1.08
CAPN2-209ENST00000487223 NLGN2Q8NFZ4 835 aa8.29□□□□□ -1.08
CAPN2-209ENST00000487223 ACSBG1Q96GR2 724 aa8.29□□□□□ -1.08
CAPN2-209ENST00000487223 NARFQ9UHQ1 456 aa8.29□□□□□ -1.08
CAPN2-209ENST00000487223 PRELPP51888 382 aa8.29□□□□□ -1.08
CAPN2-209ENST00000487223 HHIPL1Q96JK4 782 aa8.29□□□□□ -1.08
CAPN2-209ENST00000487223 CIZ1Q9ULV3 898 aaPredicted RBP8.29□□□□□ -1.08
CAPN2-209ENST00000487223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.28□□□□□ -1.08
CAPN2-209ENST00000487223 GYS1P13807 737 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 SNED1Q8TER0 1413 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 KIF7Q2M1P5 1343 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 TMED8Q6PL24 325 aaPredicted RBP8.28□□□□□ -1.08
CAPN2-209ENST00000487223 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 PLCD3Q8N3E9 789 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 EYA1Q99502 592 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 CARMIL3Q8ND23 1372 aa8.28□□□□□ -1.08
CAPN2-209ENST00000487223 DALRD3Q5D0E6 543 aaKnown RBP8.28□□□□□ -1.08
CAPN2-209ENST00000487223 KCNA3P22001 575 aa8.27□□□□□ -1.09
CAPN2-209ENST00000487223 EIF4A2Q14240 407 aaKnown RBP8.27□□□□□ -1.09
CAPN2-209ENST00000487223 ZFP91Q96JP5 570 aaPredicted RBP8.27□□□□□ -1.09
CAPN2-209ENST00000487223 CARD14Q9BXL6 1004 aa8.27□□□□□ -1.09
CAPN2-209ENST00000487223 REM2Q8IYK8 340 aaPredicted RBP8.27□□□□□ -1.09
CAPN2-209ENST00000487223 DDX54Q8TDD1 881 aaKnown RBP8.27□□□□□ -1.09
CAPN2-209ENST00000487223 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
CAPN2-209ENST00000487223 POLRMTO00411 1230 aaKnown RBP8.26□□□□□ -1.09
CAPN2-209ENST00000487223 PDE6BP35913 854 aa8.26□□□□□ -1.09
CAPN2-209ENST00000487223 ITPK1Q13572 414 aa8.26□□□□□ -1.09
CAPN2-209ENST00000487223 NAP1L2Q9ULW6 460 aaPredicted RBP8.26□□□□□ -1.09
CAPN2-209ENST00000487223 COL15A1P39059 1388 aa8.26□□□□□ -1.09
CAPN2-209ENST00000487223 TRPM7Q96QT4 1865 aa8.26□□□□□ -1.09
CAPN2-209ENST00000487223 LMNB1P20700 586 aa8.26□□□□□ -1.09
CAPN2-209ENST00000487223 IL13P35225 146 aa8.26□□□□□ -1.09
CAPN2-209ENST00000487223 HS6ST3Q8IZP7 471 aa8.26□□□□□ -1.09
CAPN2-209ENST00000487223 MIER1Q8N108 512 aa8.25□□□□□ -1.09
CAPN2-209ENST00000487223 SLC52A2Q9HAB3 445 aa8.25□□□□□ -1.09
CAPN2-209ENST00000487223 PSME4Q14997 1843 aa8.25□□□□□ -1.09
CAPN2-209ENST00000487223 CAPN2P17655 700 aa8.25□□□□□ -1.09
CAPN2-209ENST00000487223 ATP6V1AP38606 617 aa8.25□□□□□ -1.09
CAPN2-209ENST00000487223 IL6STP40189 918 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms