RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PIK3R2O00459 728 aa7.91□□□□□ -1.14
SNRNP27-204ENST00000487029 ATXN7O15265 892 aaPredicted RBP7.91□□□□□ -1.14
SNRNP27-204ENST00000487029 MAPTP10636 758 aaKnown RBP7.91□□□□□ -1.14
SNRNP27-204ENST00000487029 SCNN1DP51172 638 aa7.91□□□□□ -1.14
SNRNP27-204ENST00000487029 TNP2Q05952 138 aa7.91□□□□□ -1.14
SNRNP27-204ENST00000487029 TBC1D9Q6ZT07 1266 aa7.91□□□□□ -1.14
SNRNP27-204ENST00000487029 BANK1Q8NDB2 785 aa7.91□□□□□ -1.14
SNRNP27-204ENST00000487029 FOXD4L6Q3SYB3 417 aaPredicted RBP7.9□□□□□ -1.14
SNRNP27-204ENST00000487029 FIGNL1Q6PIW4 674 aa7.9□□□□□ -1.14
SNRNP27-204ENST00000487029 FOXD4L3Q6VB84 417 aaPredicted RBP7.9□□□□□ -1.14
SNRNP27-204ENST00000487029 AIDAQ96BJ3 306 aa7.9□□□□□ -1.14
SNRNP27-204ENST00000487029 DOLKQ9UPQ8 538 aa7.9□□□□□ -1.14
SNRNP27-204ENST00000487029 A0A1W2PNR3 127 aa7.89□□□□□ -1.15
SNRNP27-204ENST00000487029 ADH6P28332 368 aa7.89□□□□□ -1.15
SNRNP27-204ENST00000487029 PCBP4P57723 403 aaKnown RBP7.89□□□□□ -1.15
SNRNP27-204ENST00000487029 USP4Q13107 963 aa7.89□□□□□ -1.15
SNRNP27-204ENST00000487029 NLRP8Q86W28 1048 aa7.89□□□□□ -1.15
SNRNP27-204ENST00000487029 ZNF295-AS1Q8N0V1 137 aa7.89□□□□□ -1.15
SNRNP27-204ENST00000487029 PLVAPQ9BX97 442 aa7.89□□□□□ -1.15
SNRNP27-204ENST00000487029 SOCS7O14512 581 aa7.88□□□□□ -1.15
SNRNP27-204ENST00000487029 OXLD1Q5BKU9 147 aa7.88□□□□□ -1.15
SNRNP27-204ENST00000487029 ZMYM1Q5SVZ6 1142 aa7.88□□□□□ -1.15
SNRNP27-204ENST00000487029 STRN4Q9NRL3 753 aa7.88□□□□□ -1.15
SNRNP27-204ENST00000487029 USP3Q9Y6I4 520 aa7.88□□□□□ -1.15
SNRNP27-204ENST00000487029 KHNYNO15037 678 aaKnown RBP7.87□□□□□ -1.15
SNRNP27-204ENST00000487029 INHAP05111 366 aa7.87□□□□□ -1.15
SNRNP27-204ENST00000487029 GATA4P43694 442 aa7.87□□□□□ -1.15
SNRNP27-204ENST00000487029 RSPO4Q2I0M5 234 aaPredicted RBP7.87□□□□□ -1.15
SNRNP27-204ENST00000487029 FAM182BQ5T319 152 aa7.87□□□□□ -1.15
SNRNP27-204ENST00000487029 CHIC2Q9UKJ5 165 aa7.87□□□□□ -1.15
SNRNP27-204ENST00000487029 GDF10P55107 478 aa7.86□□□□□ -1.15
SNRNP27-204ENST00000487029 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
SNRNP27-204ENST00000487029 C1orf216Q8TAB5 229 aa7.86□□□□□ -1.15
SNRNP27-204ENST00000487029 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
SNRNP27-204ENST00000487029 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
SNRNP27-204ENST00000487029 SMTNP53814 917 aa7.85□□□□□ -1.15
SNRNP27-204ENST00000487029 IRF5Q13568 498 aa7.85□□□□□ -1.15
SNRNP27-204ENST00000487029 ARSJQ5FYB0 599 aaPredicted RBP7.85□□□□□ -1.15
SNRNP27-204ENST00000487029 NKAPLQ5M9Q1 402 aa7.85□□□□□ -1.15
SNRNP27-204ENST00000487029 ZIC5Q96T25 663 aa7.85□□□□□ -1.15
SNRNP27-204ENST00000487029 SLFNL1Q499Z3 407 aa7.84□□□□□ -1.15
SNRNP27-204ENST00000487029 ZNF468Q5VIY5 522 aaPredicted RBP7.84□□□□□ -1.15
SNRNP27-204ENST00000487029 AVENQ9NQS1 362 aaPredicted RBP7.84□□□□□ -1.15
SNRNP27-204ENST00000487029 SERTAD1Q9UHV2 236 aa7.84□□□□□ -1.15
SNRNP27-204ENST00000487029 IQSEC3Q9UPP2 1182 aaPredicted RBP7.84□□□□□ -1.15
SNRNP27-204ENST00000487029 SPATA31C1P0DKV0 1188 aa7.83□□□□□ -1.16
SNRNP27-204ENST00000487029 NEUROD2Q15784 382 aa7.83□□□□□ -1.16
SNRNP27-204ENST00000487029 MDFIQ99750 246 aa7.83□□□□□ -1.16
SNRNP27-204ENST00000487029 TPSG1Q9NRR2 321 aa7.83□□□□□ -1.16
SNRNP27-204ENST00000487029 TMEM229AB2RXF0 380 aa7.82□□□□□ -1.16
SNRNP27-204ENST00000487029 FAM157BP0CG42 384 aa7.82□□□□□ -1.16
SNRNP27-204ENST00000487029 COL9A3Q14050 684 aaPredicted RBP7.82□□□□□ -1.16
SNRNP27-204ENST00000487029 EFSO43281 561 aa7.81□□□□□ -1.16
SNRNP27-204ENST00000487029 EIF4G2P78344 907 aaKnown RBP eCLIP7.81□□□□□ -1.16
SNRNP27-204ENST00000487029 PRR12Q9ULL5 1215 aa7.81□□□□□ -1.16
SNRNP27-204ENST00000487029 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
SNRNP27-204ENST00000487029 ELOA3CA0A087WX78 387 aaPredicted RBP7.8□□□□□ -1.16
SNRNP27-204ENST00000487029 ELOA3DA6NLF2 546 aaPredicted RBP7.8□□□□□ -1.16
SNRNP27-204ENST00000487029 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
SNRNP27-204ENST00000487029 ELOA3BQ3SY89 546 aa7.8□□□□□ -1.16
SNRNP27-204ENST00000487029 ELOA3Q8NG57 546 aa7.8□□□□□ -1.16
SNRNP27-204ENST00000487029 SLC4A9Q96Q91 983 aa7.8□□□□□ -1.16
SNRNP27-204ENST00000487029 CDK2AP1O14519 115 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 VAC14Q08AM6 782 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 MTFR1Q15390 333 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 NBPF1Q3BBV0 1214 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 SYT9Q86SS6 491 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 SIRT1Q96EB6 747 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 ZDHHC3Q9NYG2 299 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 MARK1Q9P0L2 795 aa7.79□□□□□ -1.16
SNRNP27-204ENST00000487029 A6NJY4 79 aa7.78□□□□□ -1.16
SNRNP27-204ENST00000487029 DYRK3O43781 588 aa7.78□□□□□ -1.16
SNRNP27-204ENST00000487029 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
SNRNP27-204ENST00000487029 TXLNAP40222 546 aa7.78□□□□□ -1.16
SNRNP27-204ENST00000487029 KRTAP4-12Q9BQ66 201 aa7.78□□□□□ -1.16
SNRNP27-204ENST00000487029 CABP1Q9NZU7 370 aa7.78□□□□□ -1.16
SNRNP27-204ENST00000487029 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
SNRNP27-204ENST00000487029 SCO2A0A1W2PP80 73 aa7.77□□□□□ -1.17
SNRNP27-204ENST00000487029 APBB1O00213 710 aa7.77□□□□□ -1.17
SNRNP27-204ENST00000487029 SAMD5Q5TGI4 173 aa7.77□□□□□ -1.17
SNRNP27-204ENST00000487029 PLPP7Q8NBV4 271 aa7.77□□□□□ -1.17
SNRNP27-204ENST00000487029 ZDHHC1Q8WTX9 485 aa7.77□□□□□ -1.17
SNRNP27-204ENST00000487029 BICDL1Q6ZP65 573 aa7.76□□□□□ -1.17
SNRNP27-204ENST00000487029 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
SNRNP27-204ENST00000487029 GJA3Q9Y6H8 435 aa7.76□□□□□ -1.17
SNRNP27-204ENST00000487029 M0R082 166 aa7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 LAMC2Q13753 1193 aa7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 GRIK4Q16099 956 aa7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 ARTNQ5T4W7 220 aa7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 ZNF417Q8TAU3 575 aa7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 C7orf43Q8WVR3 580 aa7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 ZNF587Q96SQ5 575 aaPredicted RBP7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 SLC30A3Q99726 388 aa7.75□□□□□ -1.17
SNRNP27-204ENST00000487029 ALBP02768 609 aa7.74□□□□□ -1.17
SNRNP27-204ENST00000487029 ALAS2P22557 587 aa7.74□□□□□ -1.17
SNRNP27-204ENST00000487029 BRPF1P55201 1214 aaPredicted RBP7.74□□□□□ -1.17
SNRNP27-204ENST00000487029 SFSWAPQ12872 951 aaKnown RBP7.74□□□□□ -1.17
SNRNP27-204ENST00000487029 MAP7D1Q3KQU3 841 aa7.74□□□□□ -1.17
SNRNP27-204ENST00000487029 PRRT3Q5FWE3 981 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms