RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 CHL1O00533 1208 aa6.66□□□□□ -1.34
RAB3GAP1-204ENST00000487003 G3BP1Q13283 466 aaKnown RBP eCLIP6.66□□□□□ -1.348e-7■□□□□ 8.4
RAB3GAP1-204ENST00000487003 CNNM1Q9NRU3 951 aa6.66□□□□□ -1.34
RAB3GAP1-204ENST00000487003 TTLL7Q6ZT98 887 aa6.66□□□□□ -1.34
RAB3GAP1-204ENST00000487003 SETDB2Q96T68 719 aa6.66□□□□□ -1.34
RAB3GAP1-204ENST00000487003 CDK12Q9NYV4 1490 aaPredicted RBP6.65□□□□□ -1.34
RAB3GAP1-204ENST00000487003 ZNF142P52746 1687 aaPredicted RBP6.65□□□□□ -1.34
RAB3GAP1-204ENST00000487003 PROSER3Q2NL68 480 aa6.65□□□□□ -1.34
RAB3GAP1-204ENST00000487003 PTF1AQ7RTS3 328 aa6.65□□□□□ -1.34
RAB3GAP1-204ENST00000487003 MPHOSPH8Q99549 860 aa6.65□□□□□ -1.34
RAB3GAP1-204ENST00000487003 CCDC87Q9NVE4 849 aa6.65□□□□□ -1.34
RAB3GAP1-204ENST00000487003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.65□□□□□ -1.344e-7■■■□□ 15.8
RAB3GAP1-204ENST00000487003 CHD2O14647 1828 aaKnown RBP6.65□□□□□ -1.34
RAB3GAP1-204ENST00000487003 SRGAP3O43295 1099 aa6.65□□□□□ -1.35
RAB3GAP1-204ENST00000487003 GIGYF1O75420 1035 aaPredicted RBP6.65□□□□□ -1.35
RAB3GAP1-204ENST00000487003 TRIM27P14373 513 aa6.65□□□□□ -1.35
RAB3GAP1-204ENST00000487003 LNPKQ9C0E8 428 aa6.65□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IFT172Q9UG01 1749 aa6.65□□□□□ -1.35
RAB3GAP1-204ENST00000487003 RGPD8O14715 1765 aaPredicted RBP6.65□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ZBTB7AO95365 584 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 GNAI3P08754 354 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CRKLP46109 303 aaKnown RBP6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CCDC57Q2TAC2 916 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 NUTM1Q86Y26 1132 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 FAM89AQ96GI7 184 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ATG3Q9NT62 314 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 PALLDQ8WX93 1383 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 HCLS1P14317 486 aaPredicted RBP6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CCDC27Q2M243 656 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 FNBP4Q8N3X1 1017 aaPredicted RBP6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 SRP68Q9UHB9 627 aaKnown RBP6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 NALCNQ8IZF0 1738 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 KIF24Q5T7B8 1368 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 GNAI2P04899 355 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 TXNRD1Q16881 649 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IL1RAPL2Q9NP60 686 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 DDX21Q9NR30 783 aaKnown RBP eCLIP6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 EXOC6BQ9Y2D4 811 aa6.64□□□□□ -1.35
RAB3GAP1-204ENST00000487003 DCAF8L1A6NGE4 600 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CCT4P50991 539 aaKnown RBP6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 EZH2Q15910 746 aaKnown RBP6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 RILPL2Q969X0 211 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 LRRFIP2Q9Y608 721 aaKnown RBP6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IL16Q14005 1332 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ITSN1Q15811 1721 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 R3HDM1Q15032 1099 aaKnown RBP6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 PARP3Q9Y6F1 533 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ROBO1Q9Y6N7 1651 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 STRCQ7RTU9 1775 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IFIT2P09913 472 aaKnown RBP6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 POLD1P28340 1107 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 RPGRQ92834 1020 aaKnown RBP6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 MEIS3Q99687 375 aa6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CWC25Q9NXE8 425 aaPredicted RBP6.63□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CPDO75976 1380 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 XRN1Q8IZH2 1706 aaKnown RBP6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 MVPQ14764 893 aaKnown RBP6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 HSP90AB3PQ58FF7 597 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 KSR2Q6VAB6 950 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 BARGINQ6ZT62 677 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 PPP1R42Q7Z4L9 355 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 MRPL50Q8N5N7 158 aaKnown RBP6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 UPF2Q9HAU5 1272 aaKnown RBP6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ISY1Q9ULR0 285 aaKnown RBP6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 COL5A2P05997 1499 aaPredicted RBP6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CT47B1P0C2W7 299 aaPredicted RBP6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ALDH1L2Q3SY69 923 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 SKAP1Q86WV1 359 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ANKIB1Q9P2G1 1089 aa6.62□□□□□ -1.35
RAB3GAP1-204ENST00000487003 MEGF6O75095 1541 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 PXDNQ92626 1479 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 C6orf229H3BNL8 230 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 HELBQ8NG08 1087 aaPredicted RBP6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IQSEC2Q5JU85 1478 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 RLBP1P12271 317 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IGHMBP2P38935 993 aaKnown RBP6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 LMBR1LQ6UX01 489 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 NLRP3Q96P20 1036 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 NAP1L2Q9ULW6 460 aaPredicted RBP6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CAMTA1Q9Y6Y1 1673 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 PHLPP1O60346 1717 aa6.61□□□□□ -1.35
RAB3GAP1-204ENST00000487003 ST5P78524 1137 aa6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IFIT5Q13325 482 aaKnown RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 METTL24Q5JXM2 366 aa6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CNBD1Q8NA66 436 aa6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IQSEC3Q9UPP2 1182 aaPredicted RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 SMARCA5O60264 1052 aaPredicted RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 MAP4K4O95819 1239 aaPredicted RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 CHAF1AQ13111 956 aaPredicted RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 DDX46Q7L014 1031 aaKnown RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 UTP14AQ9BVJ6 771 aaKnown RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 FMN2Q9NZ56 1722 aa6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 MAP2P11137 1827 aaKnown RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 IRS4O14654 1257 aaPredicted RBP6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 KLHDC4Q8TBB5 520 aa6.6□□□□□ -1.35
RAB3GAP1-204ENST00000487003 DNAJC2Q99543 621 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms