RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 PCDH11XQ9BZA7 1347 aa8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 PCDH11YQ9BZA8 1340 aa8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 ZC3H4Q9UPT8 1303 aaKnown RBP8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 ITGBL1O95965 494 aaPredicted RBP8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 TATP17735 454 aaPredicted RBP8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 AMPHP49418 695 aa8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 TSKSQ9UJT2 592 aa8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 RTCBQ9Y3I0 505 aaKnown RBP8.9□□□□□ -0.98
CTDSPL-208ENST00000486978 FER1L6Q2WGJ9 1857 aa8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 KIF20BQ96Q89 1820 aa8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 KDRP35968 1356 aa8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 CGNL1Q0VF96 1302 aa8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 FYB1O15117 783 aa8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 DDNO94850 711 aaPredicted RBP8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 POLA2Q14181 598 aa8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 NKX1-1Q15270 411 aaPredicted RBP8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 RAPGEF4Q8WZA2 1011 aa8.89□□□□□ -0.99
CTDSPL-208ENST00000486978 MKI67P46013 3256 aaKnown RBP8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 WDR33Q9C0J8 1336 aaKnown RBP8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 POLRMTO00411 1230 aaKnown RBP8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 RPS6KA4O75676 772 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 ATXN8OSP0DMR3 200 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 TM4SF1P30408 202 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 HSP90AB2PQ58FF8 381 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 GGNBP2Q9H3C7 697 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 ZNF831Q5JPB2 1677 aa8.88□□□□□ -0.99
CTDSPL-208ENST00000486978 RTL1A6NKG5 1358 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 ADAMTSL1Q8N6G6 1762 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 TMEM88BA6NKF7 163 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 RFC4P35249 363 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 FMR1Q06787 632 aaKnown RBP eCLIP8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 CARD14Q9BXL6 1004 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 MCOLN1Q9GZU1 580 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 NRXN2Q9P2S2 1712 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 CACNA1SQ13698 1873 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 ANKRD31Q8N7Z5 1873 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 THSD7BQ9C0I4 1608 aa8.87□□□□□ -0.99
CTDSPL-208ENST00000486978 RASSF10A6NK89 507 aa8.86□□□□□ -0.99
CTDSPL-208ENST00000486978 HMGB2P26583 209 aaKnown RBP8.86□□□□□ -0.99
CTDSPL-208ENST00000486978 DEFB115Q30KQ5 88 aa8.86□□□□□ -0.99
CTDSPL-208ENST00000486978 RC3H1Q5TC82 1133 aaKnown RBP8.86□□□□□ -0.99
CTDSPL-208ENST00000486978 POLR3GLQ9BT43 218 aa8.86□□□□□ -0.99
CTDSPL-208ENST00000486978 RBM42Q9BTD8 480 aaKnown RBP8.85□□□□□ -0.99
CTDSPL-208ENST00000486978 TMOD3Q9NYL9 352 aa8.85□□□□□ -0.99
CTDSPL-208ENST00000486978 SZT2Q5T011 3432 aa8.85□□□□□ -0.99
CTDSPL-208ENST00000486978 KIF24Q5T7B8 1368 aa8.85□□□□□ -0.99
CTDSPL-208ENST00000486978 CARMIL3Q8ND23 1372 aa8.85□□□□□ -0.99
CTDSPL-208ENST00000486978 SCN4AP35499 1836 aa8.84□□□□□ -0.99
CTDSPL-208ENST00000486978 USP42Q9H9J4 1324 aaKnown RBP8.84□□□□□ -0.99
CTDSPL-208ENST00000486978 COL11A2P13942 1736 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL-208ENST00000486978 TJP1Q07157 1748 aa8.84□□□□□ -0.99
CTDSPL-208ENST00000486978 DPY19L2Q6NUT2 758 aa8.84□□□□□ -0.99
CTDSPL-208ENST00000486978 TAF1DQ9H5J8 278 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL-208ENST00000486978 SLX4Q8IY92 1834 aa8.84□□□□□ -0.99
CTDSPL-208ENST00000486978 CNTNAP4Q9C0A0 1308 aa8.83□□□□□ -1
CTDSPL-208ENST00000486978 SMG6Q86US8 1419 aaKnown RBP8.83□□□□□ -1
CTDSPL-208ENST00000486978 AOC2O75106 756 aa8.83□□□□□ -1
CTDSPL-208ENST00000486978 MAP2K1Q02750 393 aaPredicted RBP8.83□□□□□ -1
CTDSPL-208ENST00000486978 ERFEQ4G0M1 354 aa8.83□□□□□ -1
CTDSPL-208ENST00000486978 LDHDQ86WU2 507 aa8.83□□□□□ -1
CTDSPL-208ENST00000486978 INSRP06213 1382 aa8.83□□□□□ -1
CTDSPL-208ENST00000486978 FLT4P35916 1363 aa8.83□□□□□ -1
CTDSPL-208ENST00000486978 ANKRD26Q9UPS8 1709 aa8.83□□□□□ -1
CTDSPL-208ENST00000486978 A0A0C4DFX4 3053 aa8.82□□□□□ -1
CTDSPL-208ENST00000486978 NCAPD2Q15021 1401 aa8.82□□□□□ -1
CTDSPL-208ENST00000486978 C21orf2O43822 256 aa8.82□□□□□ -1
CTDSPL-208ENST00000486978 PHKG2P15735 406 aa8.82□□□□□ -1
CTDSPL-208ENST00000486978 SOX10P56693 466 aa8.82□□□□□ -1
CTDSPL-208ENST00000486978 MAP1SQ66K74 1059 aaPredicted RBP8.82□□□□□ -1
CTDSPL-208ENST00000486978 CYP4F22Q6NT55 531 aa8.82□□□□□ -1
CTDSPL-208ENST00000486978 TTLL6Q8N841 843 aa8.82□□□□□ -1
CTDSPL-208ENST00000486978 CRKLP46109 303 aaKnown RBP8.81□□□□□ -1
CTDSPL-208ENST00000486978 NFIXQ14938 502 aa8.81□□□□□ -1
CTDSPL-208ENST00000486978 EAPPQ56P03 285 aaPredicted RBP8.81□□□□□ -1
CTDSPL-208ENST00000486978 USPL1Q5W0Q7 1092 aa8.81□□□□□ -1
CTDSPL-208ENST00000486978 INTS5Q6P9B9 1019 aaKnown RBP8.81□□□□□ -1
CTDSPL-208ENST00000486978 C2CD5Q86YS7 1000 aa8.81□□□□□ -1
CTDSPL-208ENST00000486978 PANK3Q9H999 370 aa8.81□□□□□ -1
CTDSPL-208ENST00000486978 BCL2L12Q9HB09 334 aa8.81□□□□□ -1
CTDSPL-208ENST00000486978 EMILIN1Q9Y6C2 1016 aa8.81□□□□□ -1
CTDSPL-208ENST00000486978 GRM1Q13255 1194 aa8.8□□□□□ -1
CTDSPL-208ENST00000486978 DGKZQ13574 1117 aa8.8□□□□□ -1
CTDSPL-208ENST00000486978 CNTROBQ8N137 903 aa8.8□□□□□ -1
CTDSPL-208ENST00000486978 CCDC24Q8N4L8 307 aa8.8□□□□□ -1
CTDSPL-208ENST00000486978 CAPNS2Q96L46 248 aa8.8□□□□□ -1
CTDSPL-208ENST00000486978 TRPM7Q96QT4 1865 aa8.8□□□□□ -1
CTDSPL-208ENST00000486978 KIF7Q2M1P5 1343 aa8.8□□□□□ -1
CTDSPL-208ENST00000486978 PPM1GO15355 546 aaPredicted RBP8.79□□□□□ -1
CTDSPL-208ENST00000486978 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
CTDSPL-208ENST00000486978 PRPF38BQ5VTL8 546 aaKnown RBP8.79□□□□□ -1
CTDSPL-208ENST00000486978 CST9Q5W186 159 aa8.79□□□□□ -1
CTDSPL-208ENST00000486978 L3MBTL3Q96JM7 780 aaPredicted RBP8.79□□□□□ -1
CTDSPL-208ENST00000486978 GPR101Q96P66 508 aaPredicted RBP8.79□□□□□ -1
CTDSPL-208ENST00000486978 CLEC11AQ9Y240 323 aa8.79□□□□□ -1
CTDSPL-208ENST00000486978 WASHC2AQ641Q2 1341 aa8.79□□□□□ -1
CTDSPL-208ENST00000486978 ZNF541Q9H0D2 1346 aa8.79□□□□□ -1
CTDSPL-208ENST00000486978 CENPFP49454 3210 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms