RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
USP41-204ENST00000486536 RNF20Q5VTR2 975 aa8.6□□□□□ -1.03
USP41-204ENST00000486536 CCDC102BQ68D86 513 aa8.6□□□□□ -1.03
USP41-204ENST00000486536 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
USP41-204ENST00000486536 BAP1Q92560 729 aa8.6□□□□□ -1.03
USP41-204ENST00000486536 PRIMPOLQ96LW4 560 aa8.6□□□□□ -1.03
USP41-204ENST00000486536 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
USP41-204ENST00000486536 POGZQ7Z3K3 1410 aa8.6□□□□□ -1.03
USP41-204ENST00000486536 ADGBQ8N7X0 1667 aa8.59□□□□□ -1.03
USP41-204ENST00000486536 DENND4BO75064 1496 aaPredicted RBP8.59□□□□□ -1.03
USP41-204ENST00000486536 TLL1O43897 1013 aa8.59□□□□□ -1.03
USP41-204ENST00000486536 AGERQ15109 404 aa8.59□□□□□ -1.03
USP41-204ENST00000486536 BPHLQ86WA6 291 aaPredicted RBP8.59□□□□□ -1.03
USP41-204ENST00000486536 TRIM52Q96A61 297 aa8.59□□□□□ -1.03
USP41-204ENST00000486536 ERBINQ96RT1 1412 aa8.59□□□□□ -1.03
USP41-204ENST00000486536 PLXNC1O60486 1568 aa8.59□□□□□ -1.03
USP41-204ENST00000486536 DUOX2Q9NRD8 1548 aa8.59□□□□□ -1.03
USP41-204ENST00000486536 MLH3Q9UHC1 1453 aa8.58□□□□□ -1.04
USP41-204ENST00000486536 SFI1A8K8P3 1242 aa8.58□□□□□ -1.04
USP41-204ENST00000486536 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
USP41-204ENST00000486536 NOM1Q5C9Z4 860 aaKnown RBP8.58□□□□□ -1.04
USP41-204ENST00000486536 TAS1R3Q7RTX0 852 aa8.58□□□□□ -1.04
USP41-204ENST00000486536 FOXJ1Q92949 421 aa8.58□□□□□ -1.04
USP41-204ENST00000486536 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
USP41-204ENST00000486536 KDM5CP41229 1560 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 USP4Q13107 963 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 OCLNQ16625 522 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 FBXO41Q8TF61 875 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 MPHOSPH9Q99550 1183 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 CXXC1Q9P0U4 656 aaPredicted RBP8.57□□□□□ -1.04
USP41-204ENST00000486536 ZFYVE16Q7Z3T8 1539 aa8.57□□□□□ -1.04
USP41-204ENST00000486536 ATP7AQ04656 1500 aa8.56□□□□□ -1.04
USP41-204ENST00000486536 IGSF3O75054 1194 aa8.56□□□□□ -1.04
USP41-204ENST00000486536 THSD4Q6ZMP0 1018 aa8.56□□□□□ -1.04
USP41-204ENST00000486536 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
USP41-204ENST00000486536 MTRQ99707 1265 aa8.56□□□□□ -1.04
USP41-204ENST00000486536 HINFPQ9BQA5 517 aa8.56□□□□□ -1.04
USP41-204ENST00000486536 DHX29Q7Z478 1369 aaKnown RBP8.56□□□□□ -1.04
USP41-204ENST00000486536 INO80Q9ULG1 1556 aaPredicted RBP8.56□□□□□ -1.04
USP41-204ENST00000486536 ABL1P00519 1130 aa8.55□□□□□ -1.04
USP41-204ENST00000486536 PSME1Q06323 249 aa8.55□□□□□ -1.04
USP41-204ENST00000486536 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
USP41-204ENST00000486536 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
USP41-204ENST00000486536 ZNF511Q8NB15 262 aa8.55□□□□□ -1.04
USP41-204ENST00000486536 PCDHB11Q9Y5F2 797 aa8.55□□□□□ -1.04
USP41-204ENST00000486536 KDM5DQ9BY66 1539 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 MAGI2Q86UL8 1455 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 NUP155O75694 1391 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 RAPGEF3O95398 923 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 NYAP1Q6ZVC0 841 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 SLC10A4Q96EP9 437 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 BCL2L13Q9BXK5 485 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 EGFL7Q9UHF1 273 aa8.54□□□□□ -1.04
USP41-204ENST00000486536 PZPP20742 1482 aa8.53□□□□□ -1.04
USP41-204ENST00000486536 ANKRD33BA6NCL7 494 aa8.53□□□□□ -1.04
USP41-204ENST00000486536 ESPNB1AK53 854 aa8.53□□□□□ -1.04
USP41-204ENST00000486536 LGR5O75473 907 aa8.53□□□□□ -1.04
USP41-204ENST00000486536 ZNF16P17020 682 aaPredicted RBP8.53□□□□□ -1.04
USP41-204ENST00000486536 CCDC125Q86Z20 511 aa8.53□□□□□ -1.04
USP41-204ENST00000486536 ZNF516Q92618 1163 aa8.53□□□□□ -1.04
USP41-204ENST00000486536 ANO2Q9NQ90 1003 aa8.53□□□□□ -1.04
USP41-204ENST00000486536 ICMTO60725 284 aa8.52□□□□□ -1.05
USP41-204ENST00000486536 ZNF211Q13398 564 aaPredicted RBP8.52□□□□□ -1.05
USP41-204ENST00000486536 NBPF20Q3BBV1 942 aa8.52□□□□□ -1.05
USP41-204ENST00000486536 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
USP41-204ENST00000486536 KCTD12Q96CX2 325 aaKnown RBP8.52□□□□□ -1.05
USP41-204ENST00000486536 MRRFQ96E11 262 aaKnown RBP8.52□□□□□ -1.05
USP41-204ENST00000486536 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
USP41-204ENST00000486536 KIAA1522Q9P206 1035 aaPredicted RBP8.52□□□□□ -1.05
USP41-204ENST00000486536 ZMYM4Q5VZL5 1548 aa8.52□□□□□ -1.05
USP41-204ENST00000486536 A2MP01023 1474 aa8.51□□□□□ -1.05
USP41-204ENST00000486536 SEPT12Q8IYM1 358 aa8.51□□□□□ -1.05
USP41-204ENST00000486536 C1QTNF2Q9BXJ5 285 aa8.51□□□□□ -1.05
USP41-204ENST00000486536 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
USP41-204ENST00000486536 KANK1Q14678 1352 aa8.5□□□□□ -1.05
USP41-204ENST00000486536 ANKRD30BQ9BXX2 1392 aa8.5□□□□□ -1.05
USP41-204ENST00000486536 H3BRB1 525 aa8.5□□□□□ -1.05
USP41-204ENST00000486536 UNC13BO14795 1591 aa8.5□□□□□ -1.05
USP41-204ENST00000486536 GTF3C2Q8WUA4 911 aaPredicted RBP8.5□□□□□ -1.05
USP41-204ENST00000486536 TUT1Q9H6E5 874 aaKnown RBP8.5□□□□□ -1.05
USP41-204ENST00000486536 IGSF5Q9NSI5 407 aa8.5□□□□□ -1.05
USP41-204ENST00000486536 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
USP41-204ENST00000486536 SEPT3Q9UH03 358 aa8.5□□□□□ -1.05
USP41-204ENST00000486536 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 KIF3BO15066 747 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 S1PR4O95977 384 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 WEE1P30291 646 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 SH3BP2P78314 561 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 NPAS4Q8IUM7 802 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 GLYCTKQ8IVS8 523 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 TRMT44Q8IYL2 757 aaKnown RBP8.49□□□□□ -1.05
USP41-204ENST00000486536 TSEN2Q8NCE0 465 aaKnown RBP8.49□□□□□ -1.05
USP41-204ENST00000486536 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 GIPC2Q8TF65 315 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 FCF1Q9Y324 198 aaKnown RBP8.49□□□□□ -1.05
USP41-204ENST00000486536 EIF2AK4Q9P2K8 1649 aaKnown RBP8.49□□□□□ -1.05
USP41-204ENST00000486536 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
USP41-204ENST00000486536 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms