RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 ABCA3Q99758 1704 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 LMO7Q8WWI1 1683 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 FAM208AQ9UK61 1670 aaKnown RBP9.31□□□□□ -0.92
TMC1-204ENST00000486417 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 KRT28Q7Z3Y7 464 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 KCNH5Q8NCM2 988 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 NLRP7Q8WX94 980 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 EYA1Q99502 592 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 EPAS1Q99814 870 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 THUMPD2Q9BTF0 503 aaKnown RBP9.31□□□□□ -0.92
TMC1-204ENST00000486417 IFT57Q9NWB7 429 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 VIRMAQ69YN4 1812 aaKnown RBP9.3□□□□□ -0.92
TMC1-204ENST00000486417 ABCC6O95255 1503 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 NCAPD2Q15021 1401 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 NUDT7P0C024 238 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 ZNF853P0CG23 659 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 HOXB3P14651 431 aaPredicted RBP9.3□□□□□ -0.92
TMC1-204ENST00000486417 CANXP27824 592 aaKnown RBP9.3□□□□□ -0.92
TMC1-204ENST00000486417 GNAI1P63096 354 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 GIGYF2Q6Y7W6 1299 aaKnown RBP9.3□□□□□ -0.92
TMC1-204ENST00000486417 IP6K1Q92551 441 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 COL18A1P39060 1754 aa9.3□□□□□ -0.92
TMC1-204ENST00000486417 FAM83GA6ND36 823 aa9.29□□□□□ -0.92
TMC1-204ENST00000486417 PDE3AQ14432 1141 aa9.29□□□□□ -0.92
TMC1-204ENST00000486417 ARSIQ5FYB1 569 aa9.29□□□□□ -0.92
TMC1-204ENST00000486417 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
TMC1-204ENST00000486417 NPHP3Q7Z494 1330 aa9.28□□□□□ -0.92
TMC1-204ENST00000486417 ZNF335Q9H4Z2 1342 aaPredicted RBP9.28□□□□□ -0.92
TMC1-204ENST00000486417 FOSBP53539 338 aa9.28□□□□□ -0.92
TMC1-204ENST00000486417 FRAT1Q92837 279 aaPredicted RBP9.28□□□□□ -0.92
TMC1-204ENST00000486417 BCL2L13Q9BXK5 485 aa9.28□□□□□ -0.92
TMC1-204ENST00000486417 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
TMC1-204ENST00000486417 CRB1P82279 1406 aa9.28□□□□□ -0.92
TMC1-204ENST00000486417 GCP02774 474 aa9.27□□□□□ -0.93
TMC1-204ENST00000486417 DCTN1Q14203 1278 aa9.27□□□□□ -0.93
TMC1-204ENST00000486417 LTV1Q96GA3 475 aaPredicted RBP9.27□□□□□ -0.93
TMC1-204ENST00000486417 MBIPQ9NS73 344 aa9.27□□□□□ -0.93
TMC1-204ENST00000486417 SMC4Q9NTJ3 1288 aa9.27□□□□□ -0.93
TMC1-204ENST00000486417 ZBTB7CA1YPR0 619 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
TMC1-204ENST00000486417 ALDH1L2Q3SY69 923 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 ARHGEF25Q86VW2 580 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 GAS2L2Q8NHY3 880 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 PANK1Q8TE04 598 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 SSH1Q8WYL5 1049 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 TNNQ9UQP3 1299 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 KDM3BQ7LBC6 1761 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 MDM2Q00987 491 aaPredicted RBP9.26□□□□□ -0.93
TMC1-204ENST00000486417 MCM10Q7L590 875 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 ZNF454Q8N9F8 522 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 DDX17Q92841 729 aaKnown RBP9.26□□□□□ -0.93
TMC1-204ENST00000486417 ZNF428Q96B54 188 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 ARID3AQ99856 593 aa9.26□□□□□ -0.93
TMC1-204ENST00000486417 KDM2BQ8NHM5 1336 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 KIF16BQ96L93 1317 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 MAP3K5Q99683 1374 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 ADAMTS7Q9UKP4 1686 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 EIF5BO60841 1220 aaKnown RBP9.25□□□□□ -0.93
TMC1-204ENST00000486417 RLBP1P12271 317 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 C6orf132Q5T0Z8 1188 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 ZKSCAN2Q63HK3 967 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 PADI6Q6TGC4 694 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 USHBP1Q8N6Y0 703 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 ADAM33Q9BZ11 813 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 COG6Q9Y2V7 657 aa9.25□□□□□ -0.93
TMC1-204ENST00000486417 SIPA1L3O60292 1781 aaPredicted RBP9.24□□□□□ -0.93
TMC1-204ENST00000486417 NBPF6Q5VWK0 638 aa9.24□□□□□ -0.93
TMC1-204ENST00000486417 GPR153Q6NV75 609 aa9.24□□□□□ -0.93
TMC1-204ENST00000486417 BRINP3Q76B58 766 aa9.24□□□□□ -0.93
TMC1-204ENST00000486417 TSPYL6Q8N831 410 aa9.24□□□□□ -0.93
TMC1-204ENST00000486417 NBPF4Q96M43 638 aa9.24□□□□□ -0.93
TMC1-204ENST00000486417 SPATA31A3Q5VYP0 1347 aa9.24□□□□□ -0.93
TMC1-204ENST00000486417 KIAA0232Q92628 1395 aa9.23□□□□□ -0.93
TMC1-204ENST00000486417 PKD1L3Q7Z443 1732 aa9.23□□□□□ -0.93
TMC1-204ENST00000486417 HTATSF1O43719 755 aaKnown RBP9.23□□□□□ -0.93
TMC1-204ENST00000486417 VAMP4O75379 141 aa9.23□□□□□ -0.93
TMC1-204ENST00000486417 TWISTNBQ3B726 338 aaPredicted RBP9.23□□□□□ -0.93
TMC1-204ENST00000486417 ATF7IPQ6VMQ6 1270 aa9.23□□□□□ -0.93
TMC1-204ENST00000486417 DZIP1LQ8IYY4 767 aaKnown RBP9.23□□□□□ -0.93
TMC1-204ENST00000486417 CHL1O00533 1208 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 TRIM27P14373 513 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 AAMPQ13685 434 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 MVPQ14764 893 aaKnown RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 CENPQQ7L2Z9 268 aaPredicted RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 FTSJ3Q8IY81 847 aaKnown RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 ANKRD24Q8TF21 1146 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 RTF1Q92541 710 aaKnown RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 FBXW7Q969H0 707 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 ZDHHC16Q969W1 377 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 LRRC59Q96AG4 307 aaKnown RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 CLUAP1Q96AJ1 413 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 NOB1Q9ULX3 412 aaKnown RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 PARP4Q9UKK3 1724 aaKnown RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 ERBB3P21860 1342 aa9.22□□□□□ -0.93
TMC1-204ENST00000486417 N4BP2Q86UW6 1770 aaPredicted RBP9.22□□□□□ -0.93
TMC1-204ENST00000486417 ROBO1Q9Y6N7 1651 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms