RNA–Protein interactions for RNA: ENST00000486221.5

CBWD5-227, Transcript of COBW domain containing 5, humanhuman

TSL 1 (best)

Gene CBWD5, Length 1,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD5-227ENST00000486221 APAF1O14727 1248 aa11.05□□□□□ -0.64
CBWD5-227ENST00000486221 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
CBWD5-227ENST00000486221 NEFMP07197 916 aa11.05□□□□□ -0.64
CBWD5-227ENST00000486221 TEFQ10587 303 aa11.05□□□□□ -0.64
CBWD5-227ENST00000486221 LINC00116Q8NCU8 138 aa11.05□□□□□ -0.64
CBWD5-227ENST00000486221 RTF1Q92541 710 aaKnown RBP11.05□□□□□ -0.64
CBWD5-227ENST00000486221 PDGFDQ9GZP0 370 aaPredicted RBP11.05□□□□□ -0.64
CBWD5-227ENST00000486221 CICQ96RK0 1608 aaPredicted RBP11.05□□□□□ -0.64
CBWD5-227ENST00000486221 CASZ1Q86V15 1759 aa11.05□□□□□ -0.64
CBWD5-227ENST00000486221 C4BP0C0L5 1744 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 UBR3Q6ZT12 1888 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 KDM3BQ7LBC6 1761 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 AMIGO3Q86WK7 504 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 MIER1Q8N108 512 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
CBWD5-227ENST00000486221 ATP6V1AP38606 617 aa11.03□□□□□ -0.64
CBWD5-227ENST00000486221 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
CBWD5-227ENST00000486221 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
CBWD5-227ENST00000486221 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
CBWD5-227ENST00000486221 MIS18AQ9NYP9 233 aa11.03□□□□□ -0.64
CBWD5-227ENST00000486221 BTBD11A6QL63 1104 aa11.02□□□□□ -0.64
CBWD5-227ENST00000486221 SMIM5Q71RC9 77 aa11.02□□□□□ -0.64
CBWD5-227ENST00000486221 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.64
CBWD5-227ENST00000486221 ZNF496Q96IT1 587 aaPredicted RBP11.02□□□□□ -0.64
CBWD5-227ENST00000486221 STK32BQ9NY57 414 aa11.02□□□□□ -0.64
CBWD5-227ENST00000486221 CCER2I3L3R5 266 aa11.01□□□□□ -0.65
CBWD5-227ENST00000486221 TAF7Q15545 349 aaPredicted RBP11.01□□□□□ -0.65
CBWD5-227ENST00000486221 DNAJC10Q8IXB1 793 aa11.01□□□□□ -0.65
CBWD5-227ENST00000486221 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
CBWD5-227ENST00000486221 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
CBWD5-227ENST00000486221 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
CBWD5-227ENST00000486221 PRAMEF22A3QJZ6 481 aa11□□□□□ -0.65
CBWD5-227ENST00000486221 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
CBWD5-227ENST00000486221 TTC5Q8N0Z6 440 aa10.99□□□□□ -0.65
CBWD5-227ENST00000486221 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
CBWD5-227ENST00000486221 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
CBWD5-227ENST00000486221 CYP19A1P11511 503 aaPredicted RBP10.98□□□□□ -0.65
CBWD5-227ENST00000486221 CRKLP46109 303 aaKnown RBP10.98□□□□□ -0.65
CBWD5-227ENST00000486221 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
CBWD5-227ENST00000486221 COL23A1Q86Y22 540 aaPredicted RBP10.98□□□□□ -0.65
CBWD5-227ENST00000486221 TFCP2L1Q9NZI6 479 aa10.98□□□□□ -0.65
CBWD5-227ENST00000486221 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
CBWD5-227ENST00000486221 COL24A1Q17RW2 1714 aa10.97□□□□□ -0.65
CBWD5-227ENST00000486221 CHL1O00533 1208 aa10.97□□□□□ -0.65
CBWD5-227ENST00000486221 GNPATO15228 680 aa10.97□□□□□ -0.65
CBWD5-227ENST00000486221 EIF4A1P60842 406 aaKnown RBP10.97□□□□□ -0.65
CBWD5-227ENST00000486221 RC3H1Q5TC82 1133 aaKnown RBP10.97□□□□□ -0.65
CBWD5-227ENST00000486221 AK7Q96M32 723 aa10.97□□□□□ -0.65
CBWD5-227ENST00000486221 FMNL2Q96PY5 1086 aa10.97□□□□□ -0.65
CBWD5-227ENST00000486221 USP16Q9Y5T5 823 aa10.97□□□□□ -0.65
CBWD5-227ENST00000486221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
CBWD5-227ENST00000486221 PHF14O94880 888 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 ZBTB7AO95365 584 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 ZNF853P0CG23 659 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 CCDC27Q2M243 656 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 WWC1Q8IX03 1113 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 TSPYL4Q9UJ04 414 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 ZBTB1Q9Y2K1 713 aa10.96□□□□□ -0.65
CBWD5-227ENST00000486221 SALL2Q9Y467 1007 aaPredicted RBP10.96□□□□□ -0.65
CBWD5-227ENST00000486221 LAMB4A4D0S4 1761 aa10.96□□□□□ -0.66
CBWD5-227ENST00000486221 LRP5O75197 1615 aa10.95□□□□□ -0.66
CBWD5-227ENST00000486221 RPS6KA4O75676 772 aa10.95□□□□□ -0.66
CBWD5-227ENST00000486221 SSFA2P28290 1259 aa10.95□□□□□ -0.66
CBWD5-227ENST00000486221 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
CBWD5-227ENST00000486221 BABAM1Q9NWV8 329 aa10.95□□□□□ -0.66
CBWD5-227ENST00000486221 GIGYF1O75420 1035 aaPredicted RBP10.94□□□□□ -0.66
CBWD5-227ENST00000486221 A1BGP04217 495 aa10.94□□□□□ -0.66
CBWD5-227ENST00000486221 SNRPA1P09661 255 aaKnown RBP10.94□□□□□ -0.66
CBWD5-227ENST00000486221 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
CBWD5-227ENST00000486221 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
CBWD5-227ENST00000486221 MBIPQ9NS73 344 aa10.94□□□□□ -0.66
CBWD5-227ENST00000486221 CCDC87Q9NVE4 849 aa10.94□□□□□ -0.66
CBWD5-227ENST00000486221 LAS1LQ9Y4W2 734 aaKnown RBP10.94□□□□□ -0.66
CBWD5-227ENST00000486221 SOS1Q07889 1333 aaPredicted RBP10.93□□□□□ -0.66
CBWD5-227ENST00000486221 PTGER2P43116 358 aa10.93□□□□□ -0.66
CBWD5-227ENST00000486221 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
CBWD5-227ENST00000486221 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
CBWD5-227ENST00000486221 IFT57Q9NWB7 429 aa10.93□□□□□ -0.66
CBWD5-227ENST00000486221 RTCBQ9Y3I0 505 aaKnown RBP10.93□□□□□ -0.66
CBWD5-227ENST00000486221 ZNF521Q96K83 1311 aa10.93□□□□□ -0.66
CBWD5-227ENST00000486221 NBPF26B4DH59 902 aa10.92□□□□□ -0.66
CBWD5-227ENST00000486221 STARD3NLO95772 234 aa10.92□□□□□ -0.66
CBWD5-227ENST00000486221 HMGB2P26583 209 aaKnown RBP10.92□□□□□ -0.66
CBWD5-227ENST00000486221 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
CBWD5-227ENST00000486221 NBPF10Q6P3W6 841 aaKnown RBP10.92□□□□□ -0.66
CBWD5-227ENST00000486221 NBPF15Q8N660 670 aa10.92□□□□□ -0.66
CBWD5-227ENST00000486221 TEX13AQ9BXU3 409 aaPredicted RBP10.92□□□□□ -0.66
CBWD5-227ENST00000486221 MTFR1LQ9H019 292 aa10.92□□□□□ -0.66
CBWD5-227ENST00000486221 EIF5P55010 431 aaKnown RBP10.92□□□□□ -0.66
CBWD5-227ENST00000486221 MSL1Q68DK7 614 aa10.92□□□□□ -0.66
CBWD5-227ENST00000486221 FLAD1Q8NFF5 587 aa10.92□□□□□ -0.66
CBWD5-227ENST00000486221 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
CBWD5-227ENST00000486221 SRP68Q9UHB9 627 aaKnown RBP10.92□□□□□ -0.66
CBWD5-227ENST00000486221 COL15A1P39059 1388 aa10.91□□□□□ -0.66
CBWD5-227ENST00000486221 GNAI1P63096 354 aa10.91□□□□□ -0.66
CBWD5-227ENST00000486221 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
CBWD5-227ENST00000486221 TSR2Q969E8 191 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms