RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 NUP155O75694 1391 aa7.47□□□□□ -1.21
GTF2B-206ENST00000486078 POM121CA8CG34 1229 aa7.47□□□□□ -1.21
GTF2B-206ENST00000486078 BHMG1C9JSJ3 638 aaPredicted RBP7.47□□□□□ -1.21
GTF2B-206ENST00000486078 HSPA6P17066 643 aa7.47□□□□□ -1.21
GTF2B-206ENST00000486078 FAM177A1Q8N128 213 aaPredicted RBP7.47□□□□□ -1.21
GTF2B-206ENST00000486078 STRN4Q9NRL3 753 aa7.47□□□□□ -1.21
GTF2B-206ENST00000486078 DLC1Q96QB1 1528 aa7.47□□□□□ -1.21
GTF2B-206ENST00000486078 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.21
GTF2B-206ENST00000486078 RRBP1Q9P2E9 1410 aaKnown RBP7.46□□□□□ -1.21
GTF2B-206ENST00000486078 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.46□□□□□ -1.22
GTF2B-206ENST00000486078 RFX1P22670 979 aa7.46□□□□□ -1.22
GTF2B-206ENST00000486078 PRIM1P49642 420 aaKnown RBP7.46□□□□□ -1.22
GTF2B-206ENST00000486078 FAM50AQ14320 339 aaKnown RBP7.46□□□□□ -1.22
GTF2B-206ENST00000486078 DIXDC1Q155Q3 683 aa7.46□□□□□ -1.22
GTF2B-206ENST00000486078 MTMR14Q8NCE2 650 aa7.46□□□□□ -1.22
GTF2B-206ENST00000486078 RNF166Q96A37 237 aaPredicted RBP7.46□□□□□ -1.22
GTF2B-206ENST00000486078 RABGEF1Q9UJ41 708 aa7.46□□□□□ -1.22
GTF2B-206ENST00000486078 FMN2Q9NZ56 1722 aa7.46□□□□□ -1.22
GTF2B-206ENST00000486078 UTRNP46939 3433 aa7.46□□□□□ -1.22
GTF2B-206ENST00000486078 RBM47A0AV96 593 aaKnown RBP7.45□□□□□ -1.22
GTF2B-206ENST00000486078 UNCXA6NJT0 531 aa7.45□□□□□ -1.22
GTF2B-206ENST00000486078 TSR1Q2NL82 804 aaKnown RBP7.45□□□□□ -1.22
GTF2B-206ENST00000486078 PRDM11Q9NQV5 511 aa7.45□□□□□ -1.22
GTF2B-206ENST00000486078 FAM217BQ9NTX9 383 aaPredicted RBP7.45□□□□□ -1.22
GTF2B-206ENST00000486078 RGPD8O14715 1765 aaPredicted RBP7.45□□□□□ -1.22
GTF2B-206ENST00000486078 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 PLSCR1O15162 318 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 EVA1CP58658 441 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 PPP2R2DQ66LE6 453 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 PMFBP1Q8TBY8 1022 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 MTFR1LQ9H019 292 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 VRTNQ9H8Y1 702 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 STK32BQ9NY57 414 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 CLTCL1P53675 1640 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 PLEKHH1Q9ULM0 1364 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 TECPR2O15040 1411 aa7.44□□□□□ -1.22
GTF2B-206ENST00000486078 KIF1BO60333 1816 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 TRIM6-TRIM34B2RNG4 842 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 CHRNA2Q15822 529 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 NBPF3Q9H094 633 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 IGSF5Q9NSI5 407 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 KIAA1468Q9P260 1216 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 NRXN1Q9ULB1 1477 aa7.43□□□□□ -1.22
GTF2B-206ENST00000486078 PRSS12P56730 875 aa7.42□□□□□ -1.22
GTF2B-206ENST00000486078 PROX2Q3B8N5 592 aa7.42□□□□□ -1.22
GTF2B-206ENST00000486078 CFAP70Q5T0N1 1121 aa7.42□□□□□ -1.22
GTF2B-206ENST00000486078 PACS2Q86VP3 889 aa7.42□□□□□ -1.22
GTF2B-206ENST00000486078 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
GTF2B-206ENST00000486078 RPGRIP1LQ68CZ1 1315 aa7.42□□□□□ -1.22
GTF2B-206ENST00000486078 C11orf95C9JLR9 678 aaPredicted RBP7.41□□□□□ -1.22
GTF2B-206ENST00000486078 CANXP27824 592 aaKnown RBP7.41□□□□□ -1.22
GTF2B-206ENST00000486078 PRELPP51888 382 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 SRPK2P78362 688 aaKnown RBP7.41□□□□□ -1.22
GTF2B-206ENST00000486078 SLC15A2Q16348 729 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 COL13A1Q5TAT6 717 aaPredicted RBP7.41□□□□□ -1.22
GTF2B-206ENST00000486078 TMEM132EQ6IEE7 984 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 B4GALNT3Q6L9W6 998 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 LAPTM4BQ86VI4 370 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 CDCA7LQ96GN5 454 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 PHOX2BQ99453 314 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 CHMP4AQ9BY43 222 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 TBC1D2Q9BYX2 928 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
GTF2B-206ENST00000486078 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
GTF2B-206ENST00000486078 TBC1D2BQ9UPU7 963 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 MAP3K5Q99683 1374 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 IFT172Q9UG01 1749 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 RGPD3A6NKT7 1758 aaPredicted RBP7.41□□□□□ -1.22
GTF2B-206ENST00000486078 RGPD4Q7Z3J3 1758 aa7.41□□□□□ -1.22
GTF2B-206ENST00000486078 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
GTF2B-206ENST00000486078 GOLGA8CPA6NN73 597 aa7.4□□□□□ -1.22
GTF2B-206ENST00000486078 PTF1AQ7RTS3 328 aa7.4□□□□□ -1.22
GTF2B-206ENST00000486078 TCP11L2Q8N4U5 519 aa7.4□□□□□ -1.22
GTF2B-206ENST00000486078 GNEQ9Y223 722 aaKnown RBP7.4□□□□□ -1.22
GTF2B-206ENST00000486078 KIAA0232Q92628 1395 aa7.4□□□□□ -1.22
GTF2B-206ENST00000486078 ATP10DQ9P241 1426 aa7.4□□□□□ -1.22
GTF2B-206ENST00000486078 TRPM3Q9HCF6 1732 aaPredicted RBP7.39□□□□□ -1.23
GTF2B-206ENST00000486078 ALS2Q96Q42 1657 aa7.39□□□□□ -1.23
GTF2B-206ENST00000486078 GPRASP1Q5JY77 1395 aa7.39□□□□□ -1.23
GTF2B-206ENST00000486078 ABCC11Q96J66 1382 aa7.39□□□□□ -1.23
GTF2B-206ENST00000486078 ZC3H6P61129 1189 aaKnown RBP7.39□□□□□ -1.23
GTF2B-206ENST00000486078 LARP1Q6PKG0 1096 aaKnown RBP7.39□□□□□ -1.23
GTF2B-206ENST00000486078 TNS4Q8IZW8 715 aa7.39□□□□□ -1.23
GTF2B-206ENST00000486078 ZNF526Q8TF50 670 aaPredicted RBP7.39□□□□□ -1.23
GTF2B-206ENST00000486078 PPP1R12CQ9BZL4 782 aa7.39□□□□□ -1.23
GTF2B-206ENST00000486078 CDHR5Q9HBB8 845 aa7.39□□□□□ -1.23
GTF2B-206ENST00000486078 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
GTF2B-206ENST00000486078 SSH2Q76I76 1423 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 GRIN3BO60391 1043 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 ERCC3P19447 782 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 APLP1P51693 650 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 TXNRD1Q16881 649 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 WASHC4Q2M389 1173 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 THRAP3Q9Y2W1 955 aaKnown RBP7.38□□□□□ -1.23
GTF2B-206ENST00000486078 SBF2Q86WG5 1849 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 PPLO60437 1756 aa7.38□□□□□ -1.23
GTF2B-206ENST00000486078 OVOS2A0A0G2JMS6 1433 aa7.37□□□□□ -1.23
GTF2B-206ENST00000486078 OVOS2A0A0J9YW53 1432 aa7.37□□□□□ -1.23
GTF2B-206ENST00000486078 OVOS2Q6IE36 1432 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms