RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 DALRD3Q5D0E6 543 aaKnown RBP28.03■■■□□ 2.08
LMBR1-217ENST00000485985 C9orf131Q5VYM1 1079 aa28.03■■■□□ 2.08
LMBR1-217ENST00000485985 NMRK2Q9NPI5 230 aa28.03■■■□□ 2.08
LMBR1-217ENST00000485985 POLRMTO00411 1230 aaKnown RBP28.02■■■□□ 2.08
LMBR1-217ENST00000485985 ZPR1O75312 459 aa28.02■■■□□ 2.08
LMBR1-217ENST00000485985 GAS2L2Q8NHY3 880 aa28.02■■■□□ 2.08
LMBR1-217ENST00000485985 CFAP53Q96M91 514 aa28.02■■■□□ 2.08
LMBR1-217ENST00000485985 RSPH6AQ9H0K4 717 aa28.02■■■□□ 2.08
LMBR1-217ENST00000485985 AFDNP55196 1824 aaKnown RBP28.02■■■□□ 2.08
LMBR1-217ENST00000485985 SOS1Q07889 1333 aaPredicted RBP28.01■■■□□ 2.07
LMBR1-217ENST00000485985 USPL1Q5W0Q7 1092 aa28.01■■■□□ 2.07
LMBR1-217ENST00000485985 CYP19A1P11511 503 aaPredicted RBP28■■■□□ 2.07
LMBR1-217ENST00000485985 CHRNA5P30532 468 aa28■■■□□ 2.07
LMBR1-217ENST00000485985 PRKAR2BP31323 418 aa28■■■□□ 2.07
LMBR1-217ENST00000485985 APLP1P51693 650 aa28■■■□□ 2.07
LMBR1-217ENST00000485985 IL17REQ8NFR9 667 aa28■■■□□ 2.07
LMBR1-217ENST00000485985 PHACTR3Q96KR7 559 aa28■■■□□ 2.07
LMBR1-217ENST00000485985 DLG5Q8TDM6 1919 aa27.99■■■□□ 2.07
LMBR1-217ENST00000485985 GNAT3A8MTJ3 354 aa27.99■■■□□ 2.07
LMBR1-217ENST00000485985 CEMIPQ8WUJ3 1361 aa27.98■■■□□ 2.07
LMBR1-217ENST00000485985 NARFQ9UHQ1 456 aa27.96■■■□□ 2.07
LMBR1-217ENST00000485985 ZBTB1Q9Y2K1 713 aa27.96■■■□□ 2.07
LMBR1-217ENST00000485985 COL15A1P39059 1388 aa27.96■■■□□ 2.07
LMBR1-217ENST00000485985 NRXN2Q9P2S2 1712 aa27.95■■■□□ 2.07
LMBR1-217ENST00000485985 SCN7AQ01118 1682 aa27.95■■■□□ 2.07
LMBR1-217ENST00000485985 VSIG10Q8N0Z9 540 aa27.95■■■□□ 2.06
LMBR1-217ENST00000485985 TEFQ10587 303 aa27.94■■■□□ 2.06
LMBR1-217ENST00000485985 NFIXQ14938 502 aa27.94■■■□□ 2.06
LMBR1-217ENST00000485985 RNF181Q9P0P0 153 aa27.94■■■□□ 2.06
LMBR1-217ENST00000485985 RBM46Q8TBY0 533 aaKnown RBP27.93■■■□□ 2.06
LMBR1-217ENST00000485985 NUDCQ9Y266 331 aa27.93■■■□□ 2.06
LMBR1-217ENST00000485985 SBF1O95248 1867 aa27.93■■■□□ 2.06
LMBR1-217ENST00000485985 U2AF1L5P0DN76 240 aaPredicted RBP27.92■■■□□ 2.06
LMBR1-217ENST00000485985 U2AF1Q01081 240 aaKnown RBP eCLIP27.92■■■□□ 2.06
LMBR1-217ENST00000485985 TTC5Q8N0Z6 440 aa27.92■■■□□ 2.06
LMBR1-217ENST00000485985 DNAJC5GQ8N7S2 189 aa27.92■■■□□ 2.06
LMBR1-217ENST00000485985 ZNF496Q96IT1 587 aaPredicted RBP27.92■■■□□ 2.06
LMBR1-217ENST00000485985 KDM2BQ8NHM5 1336 aa27.92■■■□□ 2.06
LMBR1-217ENST00000485985 HEG1Q9ULI3 1381 aa27.91■■■□□ 2.06
LMBR1-217ENST00000485985 ZNF790Q6PG37 636 aa27.91■■■□□ 2.06
LMBR1-217ENST00000485985 C16orf71Q8IYS4 520 aaPredicted RBP27.91■■■□□ 2.06
LMBR1-217ENST00000485985 BCL2L12Q9HB09 334 aa27.91■■■□□ 2.06
LMBR1-217ENST00000485985 DLEC1Q9Y238 1755 aa27.9■■■□□ 2.06
LMBR1-217ENST00000485985 BCORQ6W2J9 1755 aa27.88■■■□□ 2.05
LMBR1-217ENST00000485985 SERPINB2P05120 415 aa27.88■■■□□ 2.05
LMBR1-217ENST00000485985 CANXP27824 592 aaKnown RBP27.87■■■□□ 2.05
LMBR1-217ENST00000485985 RRAGCQ9HB90 399 aa27.87■■■□□ 2.05
LMBR1-217ENST00000485985 KCNQ3O43525 872 aa27.85■■■□□ 2.05
LMBR1-217ENST00000485985 STARD3NLO95772 234 aa27.85■■■□□ 2.05
LMBR1-217ENST00000485985 FSTL1Q12841 308 aa27.85■■■□□ 2.05
LMBR1-217ENST00000485985 WDR90Q96KV7 1748 aa27.84■■■□□ 2.05
LMBR1-217ENST00000485985 EIF5P55010 431 aaKnown RBP27.84■■■□□ 2.05
LMBR1-217ENST00000485985 LAMB4A4D0S4 1761 aa27.83■■■□□ 2.05
LMBR1-217ENST00000485985 ANKRD31Q8N7Z5 1873 aa27.83■■■□□ 2.05
LMBR1-217ENST00000485985 RASSF7Q02833 373 aa27.83■■■□□ 2.05
LMBR1-217ENST00000485985 MCM10Q7L590 875 aa27.83■■■□□ 2.05
LMBR1-217ENST00000485985 TNRC6CQ9HCJ0 1690 aaKnown RBP27.83■■■□□ 2.05
LMBR1-217ENST00000485985 KDM3BQ7LBC6 1761 aa27.83■■■□□ 2.05
LMBR1-217ENST00000485985 BTBD11A6QL63 1104 aa27.82■■■□□ 2.04
LMBR1-217ENST00000485985 C2CD5Q86YS7 1000 aa27.82■■■□□ 2.04
LMBR1-217ENST00000485985 TTLL6Q8N841 843 aa27.82■■■□□ 2.04
LMBR1-217ENST00000485985 FMNL2Q96PY5 1086 aa27.82■■■□□ 2.04
LMBR1-217ENST00000485985 A0A087WZG4 1122 aa27.81■■■□□ 2.04
LMBR1-217ENST00000485985 ZC3H4Q9UPT8 1303 aaKnown RBP27.81■■■□□ 2.04
LMBR1-217ENST00000485985 H0YIN7 160 aa27.8■■■□□ 2.04
LMBR1-217ENST00000485985 LMNB1P20700 586 aa27.8■■■□□ 2.04
LMBR1-217ENST00000485985 DCTN1Q14203 1278 aa27.8■■■□□ 2.04
LMBR1-217ENST00000485985 BICDL1Q6ZP65 573 aa27.8■■■□□ 2.04
LMBR1-217ENST00000485985 CARMIL3Q8ND23 1372 aa27.8■■■□□ 2.04
LMBR1-217ENST00000485985 PRELPP51888 382 aa27.79■■■□□ 2.04
LMBR1-217ENST00000485985 HTRA3P83110 453 aa27.79■■■□□ 2.04
LMBR1-217ENST00000485985 TEX13AQ9BXU3 409 aaPredicted RBP27.79■■■□□ 2.04
LMBR1-217ENST00000485985 RTF1Q92541 710 aaKnown RBP27.78■■■□□ 2.04
LMBR1-217ENST00000485985 COL11A2P13942 1736 aaPredicted RBP27.78■■■□□ 2.04
LMBR1-217ENST00000485985 TBC1D9BQ66K14 1250 aa27.76■■■□□ 2.03
LMBR1-217ENST00000485985 CCDC88AQ3V6T2 1871 aa27.75■■■□□ 2.03
LMBR1-217ENST00000485985 PRAMEF22A3QJZ6 481 aa27.75■■■□□ 2.03
LMBR1-217ENST00000485985 GLTPD2A6NH11 291 aa27.75■■■□□ 2.03
LMBR1-217ENST00000485985 A1BGP04217 495 aa27.75■■■□□ 2.03
LMBR1-217ENST00000485985 SMC1BQ8NDV3 1235 aa27.75■■■□□ 2.03
LMBR1-217ENST00000485985 KLRG1Q96E93 195 aa27.75■■■□□ 2.03
LMBR1-217ENST00000485985 ZNF330Q9Y3S2 320 aaPredicted RBP27.75■■■□□ 2.03
LMBR1-217ENST00000485985 IL6STP40189 918 aaPredicted RBP27.74■■■□□ 2.03
LMBR1-217ENST00000485985 PLEKHF1Q96S99 279 aa27.74■■■□□ 2.03
LMBR1-217ENST00000485985 TBC1D2BQ9UPU7 963 aa27.74■■■□□ 2.03
LMBR1-217ENST00000485985 NFKBIEO00221 500 aa27.73■■■□□ 2.03
LMBR1-217ENST00000485985 HTATSF1O43719 755 aaKnown RBP27.73■■■□□ 2.03
LMBR1-217ENST00000485985 BRIP1Q9BX63 1249 aa27.73■■■□□ 2.03
LMBR1-217ENST00000485985 USP16Q9Y5T5 823 aa27.72■■■□□ 2.03
LMBR1-217ENST00000485985 CACNA1SQ13698 1873 aa27.72■■■□□ 2.03
LMBR1-217ENST00000485985 VEGFAP15692 232 aaPredicted RBP27.71■■■□□ 2.03
LMBR1-217ENST00000485985 PDE6BP35913 854 aa27.71■■■□□ 2.03
LMBR1-217ENST00000485985 PIP4K2AP48426 406 aaPredicted RBP27.71■■■□□ 2.03
LMBR1-217ENST00000485985 PRR5LQ6MZQ0 368 aa27.71■■■□□ 2.03
LMBR1-217ENST00000485985 JMYQ8N9B5 988 aa27.71■■■□□ 2.03
LMBR1-217ENST00000485985 ZNF622Q969S3 477 aaKnown RBP eCLIP27.71■■■□□ 2.032e-8■□□□□ 9.4
LMBR1-217ENST00000485985 PDZRN3Q9UPQ7 1066 aa27.71■■■□□ 2.03
LMBR1-217ENST00000485985 TIAM2Q8IVF5 1701 aa27.7■■■□□ 2.03
LMBR1-217ENST00000485985 CCDC24Q8N4L8 307 aa27.69■■■□□ 2.02
LMBR1-217ENST00000485985 CAMTA2O94983 1202 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms