RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 BABAM1Q9NWV8 329 aa22.73■■□□□ 1.23
PLD3-211ENST00000485448 ADAMTS8Q9UP79 889 aa22.73■■□□□ 1.23
PLD3-211ENST00000485448 PARP3Q9Y6F1 533 aa22.73■■□□□ 1.23
PLD3-211ENST00000485448 COL5A3P25940 1745 aaPredicted RBP22.72■■□□□ 1.23
PLD3-211ENST00000485448 SOS1Q07889 1333 aaPredicted RBP22.72■■□□□ 1.23
PLD3-211ENST00000485448 TMPOP42166 694 aaKnown RBP22.72■■□□□ 1.23
PLD3-211ENST00000485448 USP42Q9H9J4 1324 aaKnown RBP22.71■■□□□ 1.23
PLD3-211ENST00000485448 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
PLD3-211ENST00000485448 IL6STP40189 918 aaPredicted RBP22.71■■□□□ 1.23
PLD3-211ENST00000485448 NARFQ9UHQ1 456 aa22.71■■□□□ 1.23
PLD3-211ENST00000485448 ZBTB1Q9Y2K1 713 aa22.71■■□□□ 1.23
PLD3-211ENST00000485448 EIF5P55010 431 aaKnown RBP22.7■■□□□ 1.22
PLD3-211ENST00000485448 GPR162Q16538 588 aa22.7■■□□□ 1.22
PLD3-211ENST00000485448 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
PLD3-211ENST00000485448 KCNQ3O43525 872 aa22.68■■□□□ 1.22
PLD3-211ENST00000485448 TJP1Q07157 1748 aa22.67■■□□□ 1.22
PLD3-211ENST00000485448 GRIN3BO60391 1043 aa22.67■■□□□ 1.22
PLD3-211ENST00000485448 UBR2Q8IWV8 1755 aa22.66■■□□□ 1.22
PLD3-211ENST00000485448 COL15A1P39059 1388 aa22.66■■□□□ 1.22
PLD3-211ENST00000485448 TGFB2P61812 414 aa22.66■■□□□ 1.22
PLD3-211ENST00000485448 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
PLD3-211ENST00000485448 USP16Q9Y5T5 823 aa22.66■■□□□ 1.22
PLD3-211ENST00000485448 SIPA1L3O60292 1781 aaPredicted RBP22.66■■□□□ 1.22
PLD3-211ENST00000485448 SRP68Q9UHB9 627 aaKnown RBP22.65■■□□□ 1.22
PLD3-211ENST00000485448 MYH14Q7Z406 1995 aaKnown RBP22.65■■□□□ 1.22
PLD3-211ENST00000485448 TM4SF1P30408 202 aa22.64■■□□□ 1.22
PLD3-211ENST00000485448 FKBP8Q14318 412 aa22.64■■□□□ 1.22
PLD3-211ENST00000485448 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.22
PLD3-211ENST00000485448 NLGN2Q8NFZ4 835 aa22.64■■□□□ 1.22
PLD3-211ENST00000485448 MIS18AQ9NYP9 233 aa22.64■■□□□ 1.22
PLD3-211ENST00000485448 A1BGP04217 495 aa22.63■■□□□ 1.21
PLD3-211ENST00000485448 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
PLD3-211ENST00000485448 TSPYL4Q9UJ04 414 aa22.63■■□□□ 1.21
PLD3-211ENST00000485448 GIGYF1O75420 1035 aaPredicted RBP22.62■■□□□ 1.21
PLD3-211ENST00000485448 EIF4A1P60842 406 aaKnown RBP22.62■■□□□ 1.21
PLD3-211ENST00000485448 CALD1Q05682 793 aaKnown RBP22.62■■□□□ 1.21
PLD3-211ENST00000485448 RGL2O15211 777 aa22.61■■□□□ 1.21
PLD3-211ENST00000485448 THUMPD2Q9BTF0 503 aaKnown RBP22.61■■□□□ 1.21
PLD3-211ENST00000485448 ZNF330Q9Y3S2 320 aaPredicted RBP22.61■■□□□ 1.21
PLD3-211ENST00000485448 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
PLD3-211ENST00000485448 RRP7AQ9Y3A4 280 aaKnown RBP22.59■■□□□ 1.21
PLD3-211ENST00000485448 YY1P25490 414 aa22.58■■□□□ 1.21
PLD3-211ENST00000485448 CLEC4GQ6UXB4 293 aa22.58■■□□□ 1.21
PLD3-211ENST00000485448 ZNF652Q9Y2D9 606 aa22.58■■□□□ 1.21
PLD3-211ENST00000485448 POLRMTO00411 1230 aaKnown RBP22.57■■□□□ 1.2
PLD3-211ENST00000485448 DZIP3Q86Y13 1208 aaKnown RBP22.57■■□□□ 1.2
PLD3-211ENST00000485448 TRIM35Q9UPQ4 493 aa22.57■■□□□ 1.2
PLD3-211ENST00000485448 TBC1D2BQ9UPU7 963 aa22.57■■□□□ 1.2
PLD3-211ENST00000485448 ERBB4Q15303 1308 aa22.57■■□□□ 1.2
PLD3-211ENST00000485448 CHL1O00533 1208 aa22.57■■□□□ 1.2
PLD3-211ENST00000485448 NFIXQ14938 502 aa22.57■■□□□ 1.2
PLD3-211ENST00000485448 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
PLD3-211ENST00000485448 PRAMEF22A3QJZ6 481 aa22.56■■□□□ 1.2
PLD3-211ENST00000485448 APAF1O14727 1248 aa22.56■■□□□ 1.2
PLD3-211ENST00000485448 SETDB2Q96T68 719 aa22.56■■□□□ 1.2
PLD3-211ENST00000485448 BCL2L12Q9HB09 334 aa22.56■■□□□ 1.2
PLD3-211ENST00000485448 SERPINB2P05120 415 aa22.55■■□□□ 1.2
PLD3-211ENST00000485448 DDR1Q08345 913 aa22.55■■□□□ 1.2
PLD3-211ENST00000485448 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
PLD3-211ENST00000485448 DLG5Q8TDM6 1919 aa22.54■■□□□ 1.2
PLD3-211ENST00000485448 CFAP44Q96MT7 982 aa22.54■■□□□ 1.2
PLD3-211ENST00000485448 CHMP4AQ9BY43 222 aa22.54■■□□□ 1.2
PLD3-211ENST00000485448 PDZRN3Q9UPQ7 1066 aa22.54■■□□□ 1.2
PLD3-211ENST00000485448 C4AP0C0L4 1744 aa22.53■■□□□ 1.2
PLD3-211ENST00000485448 C10orf71Q711Q0 1435 aa22.53■■□□□ 1.2
PLD3-211ENST00000485448 NBPF26B4DH59 902 aa22.52■■□□□ 1.2
PLD3-211ENST00000485448 CAMTA2O94983 1202 aa22.52■■□□□ 1.2
PLD3-211ENST00000485448 NBPF10Q6P3W6 841 aaKnown RBP22.52■■□□□ 1.2
PLD3-211ENST00000485448 NBPF15Q8N660 670 aa22.52■■□□□ 1.2
PLD3-211ENST00000485448 LAS1LQ9Y4W2 734 aaKnown RBP22.52■■□□□ 1.2
PLD3-211ENST00000485448 A0A0G2JLW4 131 aa22.51■■□□□ 1.19
PLD3-211ENST00000485448 PIM2Q9P1W9 311 aa22.51■■□□□ 1.19
PLD3-211ENST00000485448 ERVV-1B6SEH8 477 aa22.5■■□□□ 1.19
PLD3-211ENST00000485448 HOXB7P09629 217 aa22.5■■□□□ 1.19
PLD3-211ENST00000485448 YBX3P16989 372 aaKnown RBP eCLIP22.5■■□□□ 1.191e-8■□□□□ 8.9
PLD3-211ENST00000485448 GNAI1P63096 354 aa22.5■■□□□ 1.19
PLD3-211ENST00000485448 TBC1D9BQ66K14 1250 aa22.5■■□□□ 1.19
PLD3-211ENST00000485448 BICDL1Q6ZP65 573 aa22.5■■□□□ 1.19
PLD3-211ENST00000485448 CARMIL3Q8ND23 1372 aa22.49■■□□□ 1.19
PLD3-211ENST00000485448 NPHP1O15259 732 aa22.49■■□□□ 1.19
PLD3-211ENST00000485448 DPEP1P16444 411 aa22.49■■□□□ 1.19
PLD3-211ENST00000485448 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
PLD3-211ENST00000485448 IFT57Q9NWB7 429 aa22.49■■□□□ 1.19
PLD3-211ENST00000485448 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
PLD3-211ENST00000485448 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
PLD3-211ENST00000485448 KDM3BQ7LBC6 1761 aa22.47■■□□□ 1.19
PLD3-211ENST00000485448 PDE6BP35913 854 aa22.47■■□□□ 1.19
PLD3-211ENST00000485448 PIP4K2AP48426 406 aaPredicted RBP22.47■■□□□ 1.19
PLD3-211ENST00000485448 TPTE2Q6XPS3 522 aa22.47■■□□□ 1.19
PLD3-211ENST00000485448 BRIP1Q9BX63 1249 aa22.47■■□□□ 1.19
PLD3-211ENST00000485448 EIF2S2P20042 333 aaKnown RBP22.46■■□□□ 1.19
PLD3-211ENST00000485448 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
PLD3-211ENST00000485448 PXDNLA1KZ92 1463 aa22.46■■□□□ 1.19
PLD3-211ENST00000485448 H0YIN7 160 aa22.45■■□□□ 1.18
PLD3-211ENST00000485448 MYL6BP14649 208 aa22.45■■□□□ 1.18
PLD3-211ENST00000485448 ST5P78524 1137 aa22.45■■□□□ 1.18
PLD3-211ENST00000485448 DALRD3Q5D0E6 543 aaKnown RBP22.45■■□□□ 1.18
PLD3-211ENST00000485448 BCS1LQ9Y276 419 aa22.45■■□□□ 1.18
PLD3-211ENST00000485448 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
PLD3-211ENST00000485448 KCNA3P22001 575 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms