RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 RTF1Q92541 710 aaKnown RBP21.17■□□□□ 0.98
SIK3-211ENST00000485363 TEX13AQ9BXU3 409 aaPredicted RBP21.17■□□□□ 0.98
SIK3-211ENST00000485363 COL15A1P39059 1388 aa21.17■□□□□ 0.98
SIK3-211ENST00000485363 HEG1Q9ULI3 1381 aa21.17■□□□□ 0.98
SIK3-211ENST00000485363 NARFQ9UHQ1 456 aa21.16■□□□□ 0.98
SIK3-211ENST00000485363 A0A0G2JLW4 131 aa21.15■□□□□ 0.98
SIK3-211ENST00000485363 BTBD11A6QL63 1104 aa21.15■□□□□ 0.98
SIK3-211ENST00000485363 CANXP27824 592 aaKnown RBP21.15■□□□□ 0.98
SIK3-211ENST00000485363 FMNL2Q96PY5 1086 aa21.15■□□□□ 0.98
SIK3-211ENST00000485363 NEFMP07197 916 aa21.14■□□□□ 0.97
SIK3-211ENST00000485363 DDR1Q08345 913 aa21.14■□□□□ 0.97
SIK3-211ENST00000485363 HTATSF1O43719 755 aaKnown RBP21.13■□□□□ 0.97
SIK3-211ENST00000485363 TM4SF1P30408 202 aa21.13■□□□□ 0.97
SIK3-211ENST00000485363 MCM10Q7L590 875 aa21.13■□□□□ 0.97
SIK3-211ENST00000485363 A0A087WZG4 1122 aa21.12■□□□□ 0.97
SIK3-211ENST00000485363 POLRMTO00411 1230 aaKnown RBP21.12■□□□□ 0.97
SIK3-211ENST00000485363 DPEP1P16444 411 aa21.12■□□□□ 0.97
SIK3-211ENST00000485363 EIF5P55010 431 aaKnown RBP21.12■□□□□ 0.97
SIK3-211ENST00000485363 BCS1LQ9Y276 419 aa21.12■□□□□ 0.97
SIK3-211ENST00000485363 BRCA1P38398 1863 aaKnown RBP21.11■□□□□ 0.97
SIK3-211ENST00000485363 KCNQ3O43525 872 aa21.1■□□□□ 0.97
SIK3-211ENST00000485363 DCTN1Q14203 1278 aa21.09■□□□□ 0.97
SIK3-211ENST00000485363 NFIXQ14938 502 aa21.09■□□□□ 0.97
SIK3-211ENST00000485363 RALBP1Q15311 655 aa21.09■□□□□ 0.97
SIK3-211ENST00000485363 BCL2L12Q9HB09 334 aa21.09■□□□□ 0.97
SIK3-211ENST00000485363 IL6STP40189 918 aaPredicted RBP21.08■□□□□ 0.97
SIK3-211ENST00000485363 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.97
SIK3-211ENST00000485363 PNNQ9H307 717 aaKnown RBP21.08■□□□□ 0.97
SIK3-211ENST00000485363 ATP10DQ9P241 1426 aa21.08■□□□□ 0.97
SIK3-211ENST00000485363 ZNF330Q9Y3S2 320 aaPredicted RBP21.08■□□□□ 0.97
SIK3-211ENST00000485363 AFDNP55196 1824 aaKnown RBP21.08■□□□□ 0.96
SIK3-211ENST00000485363 DLG5Q8TDM6 1919 aa21.08■□□□□ 0.96
SIK3-211ENST00000485363 GIGYF1O75420 1035 aaPredicted RBP21.07■□□□□ 0.96
SIK3-211ENST00000485363 KCNA3P22001 575 aa21.07■□□□□ 0.96
SIK3-211ENST00000485363 PIM2Q9P1W9 311 aa21.07■□□□□ 0.96
SIK3-211ENST00000485363 ADCY9O60503 1353 aa21.07■□□□□ 0.96
SIK3-211ENST00000485363 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
SIK3-211ENST00000485363 PLEKHF1Q96S99 279 aa21.06■□□□□ 0.96
SIK3-211ENST00000485363 NRXN2Q9P2S2 1712 aa21.06■□□□□ 0.96
SIK3-211ENST00000485363 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
SIK3-211ENST00000485363 A1BGP04217 495 aa21.05■□□□□ 0.96
SIK3-211ENST00000485363 SERPINB2P05120 415 aa21.05■□□□□ 0.96
SIK3-211ENST00000485363 SNRPA1P09661 255 aaKnown RBP21.05■□□□□ 0.96
SIK3-211ENST00000485363 TAF7Q15545 349 aaPredicted RBP21.05■□□□□ 0.96
SIK3-211ENST00000485363 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
SIK3-211ENST00000485363 C1QTNF8P60827 252 aa21.04■□□□□ 0.96
SIK3-211ENST00000485363 ARHGAP27Q6ZUM4 889 aa21.04■□□□□ 0.96
SIK3-211ENST00000485363 TBC1D2BQ9UPU7 963 aa21.04■□□□□ 0.96
SIK3-211ENST00000485363 USP16Q9Y5T5 823 aa21.04■□□□□ 0.96
SIK3-211ENST00000485363 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
SIK3-211ENST00000485363 CHRNA5P30532 468 aa21.03■□□□□ 0.96
SIK3-211ENST00000485363 DALRD3Q5D0E6 543 aaKnown RBP21.03■□□□□ 0.96
SIK3-211ENST00000485363 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
SIK3-211ENST00000485363 GPBP1L1Q9HC44 474 aaPredicted RBP21.03■□□□□ 0.96
SIK3-211ENST00000485363 NFE2L2Q16236 605 aa21.02■□□□□ 0.96
SIK3-211ENST00000485363 PRAMEF22A3QJZ6 481 aa21.01■□□□□ 0.95
SIK3-211ENST00000485363 TBC1D9BQ66K14 1250 aa21.01■□□□□ 0.95
SIK3-211ENST00000485363 PNISRQ8TF01 805 aaKnown RBP21.01■□□□□ 0.95
SIK3-211ENST00000485363 DZIP3Q86Y13 1208 aaKnown RBP21■□□□□ 0.95
SIK3-211ENST00000485363 ZNF526Q8TF50 670 aaPredicted RBP21■□□□□ 0.95
SIK3-211ENST00000485363 MIS18AQ9NYP9 233 aa20.99■□□□□ 0.95
SIK3-211ENST00000485363 MYBBP1AQ9BQG0 1328 aaKnown RBP20.99■□□□□ 0.95
SIK3-211ENST00000485363 CARMIL3Q8ND23 1372 aa20.98■□□□□ 0.95
SIK3-211ENST00000485363 BCORQ6W2J9 1755 aa20.98■□□□□ 0.95
SIK3-211ENST00000485363 KDM3BQ7LBC6 1761 aa20.98■□□□□ 0.95
SIK3-211ENST00000485363 DLEC1Q9Y238 1755 aa20.98■□□□□ 0.95
SIK3-211ENST00000485363 CAMTA2O94983 1202 aa20.98■□□□□ 0.95
SIK3-211ENST00000485363 PIP4K2AP48426 406 aaPredicted RBP20.98■□□□□ 0.95
SIK3-211ENST00000485363 SETDB2Q96T68 719 aa20.97■□□□□ 0.95
SIK3-211ENST00000485363 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
SIK3-211ENST00000485363 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
SIK3-211ENST00000485363 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
SIK3-211ENST00000485363 H0YIN7 160 aa20.95■□□□□ 0.94
SIK3-211ENST00000485363 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 NBPF26B4DH59 902 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 PRR5LQ6MZQ0 368 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 NBPF10Q6P3W6 841 aaKnown RBP20.94■□□□□ 0.94
SIK3-211ENST00000485363 CLEC4GQ6UXB4 293 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 NBPF15Q8N660 670 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 BRIP1Q9BX63 1249 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 PDZRN3Q9UPQ7 1066 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 ZNF652Q9Y2D9 606 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 ANKRD31Q8N7Z5 1873 aa20.94■□□□□ 0.94
SIK3-211ENST00000485363 NPHP1O15259 732 aa20.93■□□□□ 0.94
SIK3-211ENST00000485363 PDE6BP35913 854 aa20.93■□□□□ 0.94
SIK3-211ENST00000485363 RIPK4P57078 832 aa20.93■□□□□ 0.94
SIK3-211ENST00000485363 TTLL6Q8N841 843 aa20.93■□□□□ 0.94
SIK3-211ENST00000485363 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
SIK3-211ENST00000485363 C9orf131Q5VYM1 1079 aa20.92■□□□□ 0.94
SIK3-211ENST00000485363 CNBD1Q8NA66 436 aa20.92■□□□□ 0.94
SIK3-211ENST00000485363 RGL2O15211 777 aa20.91■□□□□ 0.94
SIK3-211ENST00000485363 LMOD3Q0VAK6 560 aa20.91■□□□□ 0.94
SIK3-211ENST00000485363 SBF1O95248 1867 aa20.9■□□□□ 0.94
SIK3-211ENST00000485363 TMPOP42166 694 aaKnown RBP20.9■□□□□ 0.94
SIK3-211ENST00000485363 ST5P78524 1137 aa20.9■□□□□ 0.94
SIK3-211ENST00000485363 WDR43Q15061 677 aaKnown RBP eCLIP20.9■□□□□ 0.94
SIK3-211ENST00000485363 CCDC24Q8N4L8 307 aa20.9■□□□□ 0.94
SIK3-211ENST00000485363 ZNF622Q969S3 477 aaKnown RBP eCLIP20.89■□□□□ 0.931e-6■■□□□ 13.3
SIK3-211ENST00000485363 RNF181Q9P0P0 153 aa20.89■□□□□ 0.93
SIK3-211ENST00000485363 TSPYL4Q9UJ04 414 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms