RNA–Protein interactions for RNA: ENST00000485272.5

RIPPLY3-202, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 2,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-202ENST00000485272 KCPQ6ZWJ8 1503 aa15.4■□□□□ 0.06
RIPPLY3-202ENST00000485272 GIGYF1O75420 1035 aaPredicted RBP15.39■□□□□ 0.05
RIPPLY3-202ENST00000485272 CT47B1P0C2W7 299 aaPredicted RBP15.39■□□□□ 0.05
RIPPLY3-202ENST00000485272 SSH1Q8WYL5 1049 aa15.39■□□□□ 0.05
RIPPLY3-202ENST00000485272 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
RIPPLY3-202ENST00000485272 CACNA1FO60840 1977 aa15.39■□□□□ 0.05
RIPPLY3-202ENST00000485272 PLIN1O60240 522 aa15.38■□□□□ 0.05
RIPPLY3-202ENST00000485272 FMNL2Q96PY5 1086 aa15.38■□□□□ 0.05
RIPPLY3-202ENST00000485272 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
RIPPLY3-202ENST00000485272 CENPQQ7L2Z9 268 aaPredicted RBP15.38■□□□□ 0.05
RIPPLY3-202ENST00000485272 KCNA4P22459 653 aa15.37■□□□□ 0.05
RIPPLY3-202ENST00000485272 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
RIPPLY3-202ENST00000485272 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
RIPPLY3-202ENST00000485272 FAM196AQ6ZSG2 479 aa15.36■□□□□ 0.05
RIPPLY3-202ENST00000485272 SMC4Q9NTJ3 1288 aa15.36■□□□□ 0.05
RIPPLY3-202ENST00000485272 USP16Q9Y5T5 823 aa15.36■□□□□ 0.05
RIPPLY3-202ENST00000485272 AAMPQ13685 434 aa15.36■□□□□ 0.05
RIPPLY3-202ENST00000485272 FRAT1Q92837 279 aaPredicted RBP15.36■□□□□ 0.05
RIPPLY3-202ENST00000485272 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
RIPPLY3-202ENST00000485272 TRIM37O94972 964 aa15.35■□□□□ 0.05
RIPPLY3-202ENST00000485272 SNRPA1P09661 255 aaKnown RBP15.35■□□□□ 0.05
RIPPLY3-202ENST00000485272 ALDH1L2Q3SY69 923 aa15.35■□□□□ 0.05
RIPPLY3-202ENST00000485272 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
RIPPLY3-202ENST00000485272 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
RIPPLY3-202ENST00000485272 BACH2Q9BYV9 841 aa15.34■□□□□ 0.05
RIPPLY3-202ENST00000485272 ZMYND15Q9H091 742 aa15.34■□□□□ 0.05
RIPPLY3-202ENST00000485272 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
RIPPLY3-202ENST00000485272 HOXB7P09629 217 aa15.34■□□□□ 0.05
RIPPLY3-202ENST00000485272 PDE4AP27815 886 aa15.34■□□□□ 0.05
RIPPLY3-202ENST00000485272 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
RIPPLY3-202ENST00000485272 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
RIPPLY3-202ENST00000485272 CCDC30Q5VVM6 783 aa15.33■□□□□ 0.04
RIPPLY3-202ENST00000485272 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
RIPPLY3-202ENST00000485272 PALLDQ8WX93 1383 aa15.33■□□□□ 0.04
RIPPLY3-202ENST00000485272 ANXA1P04083 346 aa15.33■□□□□ 0.04
RIPPLY3-202ENST00000485272 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.04
RIPPLY3-202ENST00000485272 TJP1Q07157 1748 aa15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 PIP4K2AP48426 406 aaPredicted RBP15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 KCNQ4P56696 695 aa15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 G2E3Q7L622 706 aa15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 NOB1Q9ULX3 412 aaKnown RBP15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 TNNQ9UQP3 1299 aa15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
RIPPLY3-202ENST00000485272 PDE3AQ14432 1141 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 DNAJC10Q8IXB1 793 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 LY75O60449 1722 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 LOC102724428A0A0B4J2F2 783 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 SIK1P57059 783 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 PROSER3Q2NL68 480 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
RIPPLY3-202ENST00000485272 BRPF1P55201 1214 aaPredicted RBP15.3■□□□□ 0.04
RIPPLY3-202ENST00000485272 PDIA6Q15084 440 aa15.3■□□□□ 0.04
RIPPLY3-202ENST00000485272 VSIG10Q8N0Z9 540 aa15.3■□□□□ 0.04
RIPPLY3-202ENST00000485272 SMARCC1Q92922 1105 aaPredicted RBP15.3■□□□□ 0.04
RIPPLY3-202ENST00000485272 PHAXQ9H814 394 aaKnown RBP15.3■□□□□ 0.04
RIPPLY3-202ENST00000485272 A1BGP04217 495 aa15.29■□□□□ 0.04
RIPPLY3-202ENST00000485272 ATP6V1AP38606 617 aa15.29■□□□□ 0.04
RIPPLY3-202ENST00000485272 ITPK1Q13572 414 aa15.29■□□□□ 0.04
RIPPLY3-202ENST00000485272 DBF4Q9UBU7 674 aaPredicted RBP15.29■□□□□ 0.04
RIPPLY3-202ENST00000485272 TAF1LQ8IZX4 1826 aa15.29■□□□□ 0.04
RIPPLY3-202ENST00000485272 MYL6BP14649 208 aa15.28■□□□□ 0.04
RIPPLY3-202ENST00000485272 CANXP27824 592 aaKnown RBP15.28■□□□□ 0.04
RIPPLY3-202ENST00000485272 CLUAP1Q96AJ1 413 aa15.28■□□□□ 0.04
RIPPLY3-202ENST00000485272 NBPF26B4DH59 902 aa15.27■□□□□ 0.04
RIPPLY3-202ENST00000485272 NBPF14Q5TI25 921 aa15.27■□□□□ 0.04
RIPPLY3-202ENST00000485272 NBPF10Q6P3W6 841 aaKnown RBP15.27■□□□□ 0.04
RIPPLY3-202ENST00000485272 NBPF15Q8N660 670 aa15.27■□□□□ 0.04
RIPPLY3-202ENST00000485272 COL5A3P25940 1745 aaPredicted RBP15.27■□□□□ 0.04
RIPPLY3-202ENST00000485272 ZNF831Q5JPB2 1677 aa15.27■□□□□ 0.03
RIPPLY3-202ENST00000485272 CYP19A1P11511 503 aaPredicted RBP15.27■□□□□ 0.03
RIPPLY3-202ENST00000485272 TRIM27P14373 513 aa15.27■□□□□ 0.03
RIPPLY3-202ENST00000485272 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.03
RIPPLY3-202ENST00000485272 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.03
RIPPLY3-202ENST00000485272 KIF16BQ96L93 1317 aa15.27■□□□□ 0.03
RIPPLY3-202ENST00000485272 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 TEX13AQ9BXU3 409 aaPredicted RBP15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 RLBP1P12271 317 aa15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 FLIIQ13045 1269 aa15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 PANK1Q8TE04 598 aa15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 CHMP4AQ9BY43 222 aa15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 CICQ96RK0 1608 aaPredicted RBP15.26■□□□□ 0.03
RIPPLY3-202ENST00000485272 STARD3NLO95772 234 aa15.25■□□□□ 0.03
RIPPLY3-202ENST00000485272 IPO8O15397 1037 aaKnown RBP15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 APBA3O96018 575 aa15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 FKBP5Q13451 457 aaPredicted RBP15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 LRRC4BQ9NT99 713 aa15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 HYPKQ9NX55 129 aa15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
RIPPLY3-202ENST00000485272 F6X3S4 739 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms