RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 KIF3CO14782 793 aa13.3□□□□□ -0.28
TMEM40-208ENST00000485124 FCHSD2O94868 740 aa13.3□□□□□ -0.28
TMEM40-208ENST00000485124 HSPA6P17066 643 aa13.3□□□□□ -0.28
TMEM40-208ENST00000485124 DDR1Q08345 913 aa13.3□□□□□ -0.28
TMEM40-208ENST00000485124 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
TMEM40-208ENST00000485124 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
TMEM40-208ENST00000485124 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
TMEM40-208ENST00000485124 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
TMEM40-208ENST00000485124 COL15A1P39059 1388 aa13.3□□□□□ -0.28
TMEM40-208ENST00000485124 SBF1O95248 1867 aa13.29□□□□□ -0.28
TMEM40-208ENST00000485124 STARD3NLO95772 234 aa13.28□□□□□ -0.28
TMEM40-208ENST00000485124 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
TMEM40-208ENST00000485124 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
TMEM40-208ENST00000485124 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
TMEM40-208ENST00000485124 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
TMEM40-208ENST00000485124 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
TMEM40-208ENST00000485124 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
TMEM40-208ENST00000485124 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.29
TMEM40-208ENST00000485124 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
TMEM40-208ENST00000485124 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.29
TMEM40-208ENST00000485124 ZC3H4Q9UPT8 1303 aaKnown RBP13.27□□□□□ -0.29
TMEM40-208ENST00000485124 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.29
TMEM40-208ENST00000485124 SCN7AQ01118 1682 aa13.27□□□□□ -0.29
TMEM40-208ENST00000485124 A0A087WZG4 1122 aa13.26□□□□□ -0.29
TMEM40-208ENST00000485124 TOMM70O94826 608 aa13.26□□□□□ -0.29
TMEM40-208ENST00000485124 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
TMEM40-208ENST00000485124 TEFQ10587 303 aa13.26□□□□□ -0.29
TMEM40-208ENST00000485124 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
TMEM40-208ENST00000485124 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
TMEM40-208ENST00000485124 HEG1Q9ULI3 1381 aa13.26□□□□□ -0.29
TMEM40-208ENST00000485124 TNRC6CQ9HCJ0 1690 aaKnown RBP13.25□□□□□ -0.29
TMEM40-208ENST00000485124 NFIXQ14938 502 aa13.25□□□□□ -0.29
TMEM40-208ENST00000485124 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
TMEM40-208ENST00000485124 CFAP53Q96M91 514 aa13.25□□□□□ -0.29
TMEM40-208ENST00000485124 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
TMEM40-208ENST00000485124 U2SURPO15042 1029 aaKnown RBP13.24□□□□□ -0.29
TMEM40-208ENST00000485124 C9orf131Q5VYM1 1079 aa13.24□□□□□ -0.29
TMEM40-208ENST00000485124 BCL2L12Q9HB09 334 aa13.24□□□□□ -0.29
TMEM40-208ENST00000485124 KDM2BQ8NHM5 1336 aa13.23□□□□□ -0.29
TMEM40-208ENST00000485124 SERPINB2P05120 415 aa13.23□□□□□ -0.29
TMEM40-208ENST00000485124 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-208ENST00000485124 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-208ENST00000485124 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
TMEM40-208ENST00000485124 CHRNA5P30532 468 aa13.22□□□□□ -0.29
TMEM40-208ENST00000485124 APLP1P51693 650 aa13.22□□□□□ -0.29
TMEM40-208ENST00000485124 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
TMEM40-208ENST00000485124 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
TMEM40-208ENST00000485124 RSPH6AQ9H0K4 717 aa13.22□□□□□ -0.29
TMEM40-208ENST00000485124 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
TMEM40-208ENST00000485124 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
TMEM40-208ENST00000485124 ANKRD31Q8N7Z5 1873 aa13.21□□□□□ -0.29
TMEM40-208ENST00000485124 CANXP27824 592 aaKnown RBP13.21□□□□□ -0.29
TMEM40-208ENST00000485124 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
TMEM40-208ENST00000485124 DICER1Q9UPY3 1922 aaKnown RBP13.2□□□□□ -0.3
TMEM40-208ENST00000485124 RGL2O15211 777 aa13.2□□□□□ -0.3
TMEM40-208ENST00000485124 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
TMEM40-208ENST00000485124 TTLL6Q8N841 843 aa13.2□□□□□ -0.3
TMEM40-208ENST00000485124 NMRK2Q9NPI5 230 aa13.2□□□□□ -0.3
TMEM40-208ENST00000485124 RNF181Q9P0P0 153 aa13.2□□□□□ -0.3
TMEM40-208ENST00000485124 CCDC88AQ3V6T2 1871 aa13.2□□□□□ -0.3
TMEM40-208ENST00000485124 H0YIN7 160 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
TMEM40-208ENST00000485124 FSTL1Q12841 308 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
TMEM40-208ENST00000485124 PHACTR3Q96KR7 559 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 BRIP1Q9BX63 1249 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 TIAM2Q8IVF5 1701 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
TMEM40-208ENST00000485124 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
TMEM40-208ENST00000485124 CCER2I3L3R5 266 aa13.18□□□□□ -0.3
TMEM40-208ENST00000485124 LMNB1P20700 586 aa13.18□□□□□ -0.3
TMEM40-208ENST00000485124 PDE6BP35913 854 aa13.18□□□□□ -0.3
TMEM40-208ENST00000485124 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
TMEM40-208ENST00000485124 COL11A2P13942 1736 aaPredicted RBP13.17□□□□□ -0.3
TMEM40-208ENST00000485124 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
TMEM40-208ENST00000485124 TBC1D9BQ66K14 1250 aa13.17□□□□□ -0.3
TMEM40-208ENST00000485124 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
TMEM40-208ENST00000485124 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
TMEM40-208ENST00000485124 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
TMEM40-208ENST00000485124 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
TMEM40-208ENST00000485124 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
TMEM40-208ENST00000485124 PRR5LQ6MZQ0 368 aa13.16□□□□□ -0.3
TMEM40-208ENST00000485124 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
TMEM40-208ENST00000485124 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
TMEM40-208ENST00000485124 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
TMEM40-208ENST00000485124 SNRPA1P09661 255 aaKnown RBP13.15□□□□□ -0.3
TMEM40-208ENST00000485124 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
TMEM40-208ENST00000485124 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.3
TMEM40-208ENST00000485124 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
TMEM40-208ENST00000485124 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
TMEM40-208ENST00000485124 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
TMEM40-208ENST00000485124 DLG5Q8TDM6 1919 aa13.14□□□□□ -0.31
TMEM40-208ENST00000485124 A1BGP04217 495 aa13.14□□□□□ -0.31
TMEM40-208ENST00000485124 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
TMEM40-208ENST00000485124 DZIP3Q86Y13 1208 aaKnown RBP13.14□□□□□ -0.31
TMEM40-208ENST00000485124 CNBD1Q8NA66 436 aa13.14□□□□□ -0.31
TMEM40-208ENST00000485124 ZNF652Q9Y2D9 606 aa13.14□□□□□ -0.31
TMEM40-208ENST00000485124 KDM3BQ7LBC6 1761 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms