RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 TATP17735 454 aaPredicted RBP14.55□□□□□ -0.08
EXOSC1-210ENST00000485122 NBPF15Q8N660 670 aa14.55□□□□□ -0.08
EXOSC1-210ENST00000485122 TTLL6Q8N841 843 aa14.55□□□□□ -0.08
EXOSC1-210ENST00000485122 CGNL1Q0VF96 1302 aa14.55□□□□□ -0.08
EXOSC1-210ENST00000485122 MAP3K19Q56UN5 1328 aa14.55□□□□□ -0.08
EXOSC1-210ENST00000485122 EVC2Q86UK5 1308 aa14.55□□□□□ -0.08
EXOSC1-210ENST00000485122 NRXN2Q9P2S2 1712 aa14.55□□□□□ -0.08
EXOSC1-210ENST00000485122 L3MBTL3Q96JM7 780 aaPredicted RBP14.54□□□□□ -0.08
EXOSC1-210ENST00000485122 DDX21Q9NR30 783 aaKnown RBP eCLIP14.54□□□□□ -0.08
EXOSC1-210ENST00000485122 COL11A2P13942 1736 aaPredicted RBP14.53□□□□□ -0.08
EXOSC1-210ENST00000485122 CARMIL3Q8ND23 1372 aa14.53□□□□□ -0.08
EXOSC1-210ENST00000485122 RPS6KA4O75676 772 aa14.53□□□□□ -0.08
EXOSC1-210ENST00000485122 ZNF831Q5JPB2 1677 aa14.52□□□□□ -0.08
EXOSC1-210ENST00000485122 CNTNAP4Q9C0A0 1308 aa14.52□□□□□ -0.08
EXOSC1-210ENST00000485122 USP42Q9H9J4 1324 aaKnown RBP14.52□□□□□ -0.08
EXOSC1-210ENST00000485122 CA12O43570 354 aa14.52□□□□□ -0.09
EXOSC1-210ENST00000485122 ATG3Q9NT62 314 aa14.52□□□□□ -0.09
EXOSC1-210ENST00000485122 TMOD3Q9NYL9 352 aa14.52□□□□□ -0.09
EXOSC1-210ENST00000485122 ZNF541Q9H0D2 1346 aa14.51□□□□□ -0.09
EXOSC1-210ENST00000485122 C21orf2O43822 256 aa14.51□□□□□ -0.09
EXOSC1-210ENST00000485122 EPHX2P34913 555 aa14.51□□□□□ -0.09
EXOSC1-210ENST00000485122 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
EXOSC1-210ENST00000485122 ANKRD31Q8N7Z5 1873 aa14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 SMG6Q86US8 1419 aaKnown RBP14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 RNF123Q5XPI4 1314 aa14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 MAP2K2P36507 400 aa14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 AMPHP49418 695 aa14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 CIAPIN1Q6FI81 312 aa14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 C2CD5Q86YS7 1000 aa14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 HACL1Q9UJ83 578 aa14.5□□□□□ -0.09
EXOSC1-210ENST00000485122 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
EXOSC1-210ENST00000485122 SCN11AQ9UI33 1791 aa14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 TRAF5O00463 557 aa14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 TM4SF1P30408 202 aa14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 BRPF1P55201 1214 aaPredicted RBP14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 RC3H1Q5TC82 1133 aaKnown RBP14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 CST9Q5W186 159 aa14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 SLC17A8Q8NDX2 589 aa14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 TAOK3Q9H2K8 898 aa14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 TLL2Q9Y6L7 1015 aa14.48□□□□□ -0.09
EXOSC1-210ENST00000485122 ZIC5Q96T25 663 aa14.47□□□□□ -0.09
EXOSC1-210ENST00000485122 LTBP3Q9NS15 1303 aa14.46□□□□□ -0.09
EXOSC1-210ENST00000485122 SLX4Q8IY92 1834 aa14.46□□□□□ -0.09
EXOSC1-210ENST00000485122 EDC4Q6P2E9 1401 aaKnown RBP14.46□□□□□ -0.09
EXOSC1-210ENST00000485122 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
EXOSC1-210ENST00000485122 TJP1Q07157 1748 aa14.44□□□□□ -0.1
EXOSC1-210ENST00000485122 ZNF622Q969S3 477 aaKnown RBP eCLIP14.44□□□□□ -0.1
EXOSC1-210ENST00000485122 HPS5Q9UPZ3 1129 aa14.44□□□□□ -0.1
EXOSC1-210ENST00000485122 H0YIN7 160 aa14.43□□□□□ -0.1
EXOSC1-210ENST00000485122 NFIXQ14938 502 aa14.43□□□□□ -0.1
EXOSC1-210ENST00000485122 RRS1Q15050 365 aaKnown RBP14.43□□□□□ -0.1
EXOSC1-210ENST00000485122 USPL1Q5W0Q7 1092 aa14.43□□□□□ -0.1
EXOSC1-210ENST00000485122 PNMA8AQ86V59 439 aaPredicted RBP14.43□□□□□ -0.1
EXOSC1-210ENST00000485122 RTL1A6NKG5 1358 aa14.43□□□□□ -0.1
EXOSC1-210ENST00000485122 CRKLP46109 303 aaKnown RBP14.42□□□□□ -0.1
EXOSC1-210ENST00000485122 SAPCD2Q86UD0 394 aa14.41□□□□□ -0.1
EXOSC1-210ENST00000485122 A0A1W2PP64 1363 aa14.41□□□□□ -0.1
EXOSC1-210ENST00000485122 ARFGEF2Q9Y6D5 1785 aa14.41□□□□□ -0.1
EXOSC1-210ENST00000485122 SERPINB2P05120 415 aa14.4□□□□□ -0.1
EXOSC1-210ENST00000485122 PITPNM2Q9BZ72 1349 aa14.4□□□□□ -0.1
EXOSC1-210ENST00000485122 CTU1Q7Z7A3 348 aaKnown RBP14.38□□□□□ -0.11
EXOSC1-210ENST00000485122 CCDC24Q8N4L8 307 aa14.38□□□□□ -0.11
EXOSC1-210ENST00000485122 TMC1Q8TDI8 760 aa14.38□□□□□ -0.11
EXOSC1-210ENST00000485122 COLQQ9Y215 455 aaPredicted RBP14.38□□□□□ -0.11
EXOSC1-210ENST00000485122 BCORQ6W2J9 1755 aa14.37□□□□□ -0.11
EXOSC1-210ENST00000485122 BICDL1Q6ZP65 573 aa14.37□□□□□ -0.11
EXOSC1-210ENST00000485122 HDGFL2Q7Z4V5 671 aaPredicted RBP14.37□□□□□ -0.11
EXOSC1-210ENST00000485122 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
EXOSC1-210ENST00000485122 INSRP06213 1382 aa14.36□□□□□ -0.11
EXOSC1-210ENST00000485122 CELF2O95319 508 aaKnown RBP14.36□□□□□ -0.11
EXOSC1-210ENST00000485122 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
EXOSC1-210ENST00000485122 COG3Q96JB2 828 aa14.36□□□□□ -0.11
EXOSC1-210ENST00000485122 AKAP11Q9UKA4 1901 aa14.35□□□□□ -0.11
EXOSC1-210ENST00000485122 ZPR1O75312 459 aa14.35□□□□□ -0.11
EXOSC1-210ENST00000485122 PHKG2P15735 406 aa14.35□□□□□ -0.11
EXOSC1-210ENST00000485122 BCL2L12Q9HB09 334 aa14.35□□□□□ -0.11
EXOSC1-210ENST00000485122 ZNF277Q9NRM2 450 aaPredicted RBP14.35□□□□□ -0.11
EXOSC1-210ENST00000485122 SZT2Q5T011 3432 aa14.35□□□□□ -0.11
EXOSC1-210ENST00000485122 PTCD1O75127 700 aaKnown RBP14.34□□□□□ -0.11
EXOSC1-210ENST00000485122 INTS5Q6P9B9 1019 aaKnown RBP14.34□□□□□ -0.11
EXOSC1-210ENST00000485122 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
EXOSC1-210ENST00000485122 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
EXOSC1-210ENST00000485122 TRPA1O75762 1119 aa14.33□□□□□ -0.12
EXOSC1-210ENST00000485122 PRPF40BQ6NWY9 871 aaKnown RBP14.33□□□□□ -0.12
EXOSC1-210ENST00000485122 ZNF408Q9H9D4 720 aa14.33□□□□□ -0.12
EXOSC1-210ENST00000485122 MKI67P46013 3256 aaKnown RBP14.33□□□□□ -0.12
EXOSC1-210ENST00000485122 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
EXOSC1-210ENST00000485122 TRIOBPQ9H2D6 2365 aa14.32□□□□□ -0.12
EXOSC1-210ENST00000485122 EPS15P42566 896 aa14.32□□□□□ -0.12
EXOSC1-210ENST00000485122 NOGQ13253 232 aa14.32□□□□□ -0.12
EXOSC1-210ENST00000485122 HHIPL1Q96JK4 782 aa14.32□□□□□ -0.12
EXOSC1-210ENST00000485122 COL4A5P29400 1685 aa14.31□□□□□ -0.12
EXOSC1-210ENST00000485122 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
EXOSC1-210ENST00000485122 RNF186Q9NXI6 227 aa14.31□□□□□ -0.12
EXOSC1-210ENST00000485122 SAGE1Q9NXZ1 904 aa14.31□□□□□ -0.12
EXOSC1-210ENST00000485122 SOS1Q07889 1333 aaPredicted RBP14.31□□□□□ -0.12
EXOSC1-210ENST00000485122 PAPPA2Q9BXP8 1791 aa14.3□□□□□ -0.12
EXOSC1-210ENST00000485122 SCNN1DP51172 638 aa14.3□□□□□ -0.12
EXOSC1-210ENST00000485122 OLFM4Q6UX06 510 aa14.3□□□□□ -0.12
EXOSC1-210ENST00000485122 IFNL2Q8IZJ0 200 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms