RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 RIPK4P57078 832 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 SLC39A6Q13433 755 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 MCM10Q7L590 875 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 MTFR1LQ9H019 292 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 MRS2Q9HD23 443 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 UBR3Q6ZT12 1888 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 PNPLA7Q6ZV29 1317 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 UBR2Q8IWV8 1755 aa10.29□□□□□ -0.76
MACF1-220ENST00000485063 GNPATO15228 680 aa10.28□□□□□ -0.76
MACF1-220ENST00000485063 ZBTB7AO95365 584 aa10.28□□□□□ -0.76
MACF1-220ENST00000485063 TMPOP42166 694 aaKnown RBP10.28□□□□□ -0.76
MACF1-220ENST00000485063 ITPK1Q13572 414 aa10.28□□□□□ -0.76
MACF1-220ENST00000485063 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
MACF1-220ENST00000485063 TAF7Q15545 349 aaPredicted RBP10.28□□□□□ -0.76
MACF1-220ENST00000485063 ZNF790Q6PG37 636 aa10.28□□□□□ -0.76
MACF1-220ENST00000485063 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
MACF1-220ENST00000485063 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
MACF1-220ENST00000485063 PNISRQ8TF01 805 aaKnown RBP10.28□□□□□ -0.76
MACF1-220ENST00000485063 TEX13AQ9BXU3 409 aaPredicted RBP10.28□□□□□ -0.76
MACF1-220ENST00000485063 RTCBQ9Y3I0 505 aaKnown RBP10.28□□□□□ -0.76
MACF1-220ENST00000485063 CICQ96RK0 1608 aaPredicted RBP10.28□□□□□ -0.76
MACF1-220ENST00000485063 TJP1Q07157 1748 aa10.27□□□□□ -0.76
MACF1-220ENST00000485063 PHF14O94880 888 aa10.27□□□□□ -0.77
MACF1-220ENST00000485063 SSFA2P28290 1259 aa10.27□□□□□ -0.77
MACF1-220ENST00000485063 NEUROD2Q15784 382 aa10.27□□□□□ -0.77
MACF1-220ENST00000485063 RC3H1Q5TC82 1133 aaKnown RBP10.27□□□□□ -0.77
MACF1-220ENST00000485063 FMNL2Q96PY5 1086 aa10.27□□□□□ -0.77
MACF1-220ENST00000485063 PDGFDQ9GZP0 370 aaPredicted RBP10.27□□□□□ -0.77
MACF1-220ENST00000485063 CNTNAP4Q9C0A0 1308 aa10.27□□□□□ -0.77
MACF1-220ENST00000485063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.26□□□□□ -0.77
MACF1-220ENST00000485063 STARD3NLO95772 234 aa10.26□□□□□ -0.77
MACF1-220ENST00000485063 POLD1P28340 1107 aa10.26□□□□□ -0.77
MACF1-220ENST00000485063 TRAPPC3LQ5T215 181 aa10.26□□□□□ -0.77
MACF1-220ENST00000485063 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
MACF1-220ENST00000485063 COL23A1Q86Y22 540 aaPredicted RBP10.26□□□□□ -0.77
MACF1-220ENST00000485063 SLC4A9Q96Q91 983 aa10.26□□□□□ -0.77
MACF1-220ENST00000485063 KCPQ6ZWJ8 1503 aa10.26□□□□□ -0.77
MACF1-220ENST00000485063 RPS6KA4O75676 772 aa10.25□□□□□ -0.77
MACF1-220ENST00000485063 CRKLP46109 303 aaKnown RBP10.25□□□□□ -0.77
MACF1-220ENST00000485063 DNAJC10Q8IXB1 793 aa10.25□□□□□ -0.77
MACF1-220ENST00000485063 HEG1Q9ULI3 1381 aa10.25□□□□□ -0.77
MACF1-220ENST00000485063 RFC4P35249 363 aa10.24□□□□□ -0.77
MACF1-220ENST00000485063 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
MACF1-220ENST00000485063 CCDC87Q9NVE4 849 aa10.24□□□□□ -0.77
MACF1-220ENST00000485063 RRP7AQ9Y3A4 280 aaKnown RBP10.24□□□□□ -0.77
MACF1-220ENST00000485063 MYH14Q7Z406 1995 aaKnown RBP10.24□□□□□ -0.77
MACF1-220ENST00000485063 KDM3BQ7LBC6 1761 aa10.24□□□□□ -0.77
MACF1-220ENST00000485063 SNRPA1P09661 255 aaKnown RBP10.23□□□□□ -0.77
MACF1-220ENST00000485063 CYP19A1P11511 503 aaPredicted RBP10.23□□□□□ -0.77
MACF1-220ENST00000485063 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
MACF1-220ENST00000485063 CCDC184Q52MB2 194 aa10.23□□□□□ -0.77
MACF1-220ENST00000485063 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
MACF1-220ENST00000485063 TSPYL4Q9UJ04 414 aa10.23□□□□□ -0.77
MACF1-220ENST00000485063 COL24A1Q17RW2 1714 aa10.22□□□□□ -0.77
MACF1-220ENST00000485063 APAF1O14727 1248 aa10.22□□□□□ -0.77
MACF1-220ENST00000485063 PTGER2P43116 358 aa10.22□□□□□ -0.77
MACF1-220ENST00000485063 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
MACF1-220ENST00000485063 ARXQ96QS3 562 aa10.22□□□□□ -0.77
MACF1-220ENST00000485063 BABAM1Q9NWV8 329 aa10.22□□□□□ -0.77
MACF1-220ENST00000485063 MIS18AQ9NYP9 233 aa10.22□□□□□ -0.77
MACF1-220ENST00000485063 C4AP0C0L4 1744 aa10.21□□□□□ -0.77
MACF1-220ENST00000485063 KCNQ3O43525 872 aa10.21□□□□□ -0.77
MACF1-220ENST00000485063 ZPR1O75312 459 aa10.21□□□□□ -0.77
MACF1-220ENST00000485063 CANXP27824 592 aaKnown RBP10.21□□□□□ -0.77
MACF1-220ENST00000485063 MSL1Q68DK7 614 aa10.21□□□□□ -0.77
MACF1-220ENST00000485063 INTS5Q6P9B9 1019 aaKnown RBP10.21□□□□□ -0.77
MACF1-220ENST00000485063 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.77
MACF1-220ENST00000485063 NLGN1Q8N2Q7 840 aa10.21□□□□□ -0.77
MACF1-220ENST00000485063 LAS1LQ9Y4W2 734 aaKnown RBP10.21□□□□□ -0.77
MACF1-220ENST00000485063 LAMB4A4D0S4 1761 aa10.21□□□□□ -0.78
MACF1-220ENST00000485063 A0A087WZG4 1122 aa10.2□□□□□ -0.78
MACF1-220ENST00000485063 SMIM5Q71RC9 77 aa10.2□□□□□ -0.78
MACF1-220ENST00000485063 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
MACF1-220ENST00000485063 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
MACF1-220ENST00000485063 ZBTB1Q9Y2K1 713 aa10.2□□□□□ -0.78
MACF1-220ENST00000485063 ZNF330Q9Y3S2 320 aaPredicted RBP10.2□□□□□ -0.78
MACF1-220ENST00000485063 COL15A1P39059 1388 aa10.19□□□□□ -0.78
MACF1-220ENST00000485063 SOS1Q07889 1333 aaPredicted RBP10.19□□□□□ -0.78
MACF1-220ENST00000485063 POTEMA6NI47 508 aa10.19□□□□□ -0.78
MACF1-220ENST00000485063 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
MACF1-220ENST00000485063 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
MACF1-220ENST00000485063 AMIGO3Q86WK7 504 aa10.19□□□□□ -0.78
MACF1-220ENST00000485063 SGIP1Q9BQI5 828 aa10.19□□□□□ -0.78
MACF1-220ENST00000485063 USP16Q9Y5T5 823 aa10.19□□□□□ -0.78
MACF1-220ENST00000485063 GNAI1P63096 354 aa10.18□□□□□ -0.78
MACF1-220ENST00000485063 DIEXFQ68CQ4 756 aaKnown RBP10.18□□□□□ -0.78
MACF1-220ENST00000485063 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
MACF1-220ENST00000485063 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
MACF1-220ENST00000485063 USP42Q9H9J4 1324 aaKnown RBP10.17□□□□□ -0.78
MACF1-220ENST00000485063 CHL1O00533 1208 aa10.17□□□□□ -0.78
MACF1-220ENST00000485063 GIGYF1O75420 1035 aaPredicted RBP10.17□□□□□ -0.78
MACF1-220ENST00000485063 A1BGP04217 495 aa10.17□□□□□ -0.78
MACF1-220ENST00000485063 GYS1P13807 737 aa10.17□□□□□ -0.78
MACF1-220ENST00000485063 USPL1Q5W0Q7 1092 aa10.17□□□□□ -0.78
MACF1-220ENST00000485063 NARFQ9UHQ1 456 aa10.17□□□□□ -0.78
MACF1-220ENST00000485063 PARP3Q9Y6F1 533 aa10.17□□□□□ -0.78
MACF1-220ENST00000485063 PRAMEF22A3QJZ6 481 aa10.16□□□□□ -0.78
MACF1-220ENST00000485063 CCER2I3L3R5 266 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms