RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 EVI5LQ96CN4 794 aa7.02□□□□□ -1.29
CCDC39-205ENST00000485055 RYDENQ9NUL5 291 aaKnown RBP7.02□□□□□ -1.29
CCDC39-205ENST00000485055 SIPA1L3O60292 1781 aaPredicted RBP7.02□□□□□ -1.29
CCDC39-205ENST00000485055 ZC3H6P61129 1189 aaKnown RBP7.02□□□□□ -1.29
CCDC39-205ENST00000485055 NEUROD1Q13562 356 aa7.02□□□□□ -1.29
CCDC39-205ENST00000485055 SMYD5Q6GMV2 418 aa7.02□□□□□ -1.29
CCDC39-205ENST00000485055 SLC12A5Q9H2X9 1139 aa7.02□□□□□ -1.29
CCDC39-205ENST00000485055 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 WASHC2AQ641Q2 1341 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 UBR3Q6ZT12 1888 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 APBB1IPQ7Z5R6 666 aaPredicted RBP7.01□□□□□ -1.29
CCDC39-205ENST00000485055 UBR2Q8IWV8 1755 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 MRC1P22897 1456 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 RFX1P22670 979 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 HOXC9P31274 260 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 CHRNA2Q15822 529 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
CCDC39-205ENST00000485055 KLHL42Q9P2K6 505 aa7.01□□□□□ -1.29
CCDC39-205ENST00000485055 IL2RBP14784 551 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 DDB1Q16531 1140 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 NME9Q86XW9 330 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 MAP4K4O95819 1239 aaPredicted RBP7□□□□□ -1.29
CCDC39-205ENST00000485055 PDE3BQ13370 1112 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 SLC27A3Q5K4L6 730 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 GORABQ5T7V8 394 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 GPATCH3Q96I76 525 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 COG3Q96JB2 828 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 MEGF6O75095 1541 aa7□□□□□ -1.29
CCDC39-205ENST00000485055 PATL2C9JE40 543 aaKnown RBP6.99□□□□□ -1.29
CCDC39-205ENST00000485055 SPTY2D1Q68D10 685 aaPredicted RBP6.99□□□□□ -1.29
CCDC39-205ENST00000485055 CARD14Q9BXL6 1004 aa6.99□□□□□ -1.29
CCDC39-205ENST00000485055 KDRP35968 1356 aa6.99□□□□□ -1.29
CCDC39-205ENST00000485055 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
CCDC39-205ENST00000485055 ANKRD24Q8TF21 1146 aa6.98□□□□□ -1.29
CCDC39-205ENST00000485055 KIAA1551Q9HCM1 1747 aa6.98□□□□□ -1.29
CCDC39-205ENST00000485055 EXOC5O00471 708 aa6.98□□□□□ -1.29
CCDC39-205ENST00000485055 ZNF16P17020 682 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-205ENST00000485055 NSD3Q9BZ95 1437 aa6.98□□□□□ -1.29
CCDC39-205ENST00000485055 COL3A1P02461 1466 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-205ENST00000485055 OS9Q13438 667 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-205ENST00000485055 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
CCDC39-205ENST00000485055 TOM1L2Q6ZVM7 507 aa6.98□□□□□ -1.29
CCDC39-205ENST00000485055 DNAJC2Q99543 621 aaKnown RBP6.98□□□□□ -1.29
CCDC39-205ENST00000485055 C4BP0C0L5 1744 aa6.98□□□□□ -1.29
CCDC39-205ENST00000485055 SGIP1Q9BQI5 828 aa6.97□□□□□ -1.29
CCDC39-205ENST00000485055 POM121CA8CG34 1229 aa6.97□□□□□ -1.29
CCDC39-205ENST00000485055 NBPF14Q5TI25 921 aa6.97□□□□□ -1.29
CCDC39-205ENST00000485055 SLC16A10Q8TF71 515 aa6.97□□□□□ -1.29
CCDC39-205ENST00000485055 CALR3Q96L12 384 aaKnown RBP6.97□□□□□ -1.29
CCDC39-205ENST00000485055 GOPCQ9HD26 462 aa6.97□□□□□ -1.29
CCDC39-205ENST00000485055 TJP1Q07157 1748 aa6.97□□□□□ -1.29
CCDC39-205ENST00000485055 EIF4G2P78344 907 aaKnown RBP eCLIP6.96□□□□□ -1.29
CCDC39-205ENST00000485055 STRN4Q9NRL3 753 aa6.96□□□□□ -1.29
CCDC39-205ENST00000485055 CHD4Q14839 1912 aa6.96□□□□□ -1.3
CCDC39-205ENST00000485055 IGSF1Q8N6C5 1336 aa6.96□□□□□ -1.3
CCDC39-205ENST00000485055 NRXN2Q9P2S2 1712 aa6.96□□□□□ -1.3
CCDC39-205ENST00000485055 EZH2Q15910 746 aaKnown RBP6.96□□□□□ -1.3
CCDC39-205ENST00000485055 TSR1Q2NL82 804 aaKnown RBP6.96□□□□□ -1.3
CCDC39-205ENST00000485055 NUTM2GQ5VZR2 741 aa6.96□□□□□ -1.3
CCDC39-205ENST00000485055 UBXN4Q92575 508 aa6.96□□□□□ -1.3
CCDC39-205ENST00000485055 AKT1S1Q96B36 256 aa6.96□□□□□ -1.3
CCDC39-205ENST00000485055 PCMTD1Q96MG8 357 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-205ENST00000485055 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.96□□□□□ -1.3
CCDC39-205ENST00000485055 KAT6BQ8WYB5 2073 aa6.96□□□□□ -1.3
CCDC39-205ENST00000485055 DEFB132Q7Z7B7 95 aa6.95□□□□□ -1.3
CCDC39-205ENST00000485055 TRIM37O94972 964 aa6.95□□□□□ -1.3
CCDC39-205ENST00000485055 APBA3O96018 575 aa6.95□□□□□ -1.3
CCDC39-205ENST00000485055 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
CCDC39-205ENST00000485055 EN1Q05925 392 aaPredicted RBP6.95□□□□□ -1.3
CCDC39-205ENST00000485055 CCDC102AQ96A19 550 aa6.95□□□□□ -1.3
CCDC39-205ENST00000485055 PCDH11XQ9BZA7 1347 aa6.95□□□□□ -1.3
CCDC39-205ENST00000485055 PCDH11YQ9BZA8 1340 aa6.95□□□□□ -1.3
CCDC39-205ENST00000485055 DPH6Q7L8W6 267 aa6.94□□□□□ -1.3
CCDC39-205ENST00000485055 BRCA1P38398 1863 aaKnown RBP6.94□□□□□ -1.3
CCDC39-205ENST00000485055 PER1O15534 1290 aaPredicted RBP6.94□□□□□ -1.3
CCDC39-205ENST00000485055 MS4A1P11836 297 aa6.94□□□□□ -1.3
CCDC39-205ENST00000485055 KCNG1Q9UIX4 513 aa6.94□□□□□ -1.3
CCDC39-205ENST00000485055 DLEC1Q9Y238 1755 aa6.94□□□□□ -1.3
CCDC39-205ENST00000485055 KCNQ2O43526 872 aa6.94□□□□□ -1.3
CCDC39-205ENST00000485055 NAALADL2Q58DX5 795 aa6.94□□□□□ -1.3
CCDC39-205ENST00000485055 RBM46Q8TBY0 533 aaKnown RBP6.94□□□□□ -1.3
CCDC39-205ENST00000485055 GLMNQ92990 594 aa6.94□□□□□ -1.3
CCDC39-205ENST00000485055 C4AP0C0L4 1744 aa6.93□□□□□ -1.3
CCDC39-205ENST00000485055 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
CCDC39-205ENST00000485055 ZCRB1Q8TBF4 217 aaKnown RBP6.93□□□□□ -1.3
CCDC39-205ENST00000485055 PARNO95453 639 aaKnown RBP6.93□□□□□ -1.3
CCDC39-205ENST00000485055 SLC15A2Q16348 729 aa6.93□□□□□ -1.3
CCDC39-205ENST00000485055 TXNRD1Q16881 649 aa6.93□□□□□ -1.3
CCDC39-205ENST00000485055 SNRKQ9NRH2 765 aa6.93□□□□□ -1.3
CCDC39-205ENST00000485055 POLKQ9UBT6 870 aa6.93□□□□□ -1.3
CCDC39-205ENST00000485055 GPR37O15354 613 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 HSPA5P11021 654 aaKnown RBP6.92□□□□□ -1.3
CCDC39-205ENST00000485055 NBPF6Q5VWK0 638 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
CCDC39-205ENST00000485055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCDC39-205ENST00000485055 NME8Q8N427 588 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 PBXIP1Q96AQ6 731 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 NBPF4Q96M43 638 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 ARFGEF1Q9Y6D6 1849 aa6.92□□□□□ -1.3
CCDC39-205ENST00000485055 TBC1D12O60347 775 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms