RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
PEX1-208ENST00000484913 CARD10Q9BWT7 1032 aa13.85□□□□□ -0.19
PEX1-208ENST00000484913 ASAP1Q9ULH1 1129 aa13.85□□□□□ -0.19
PEX1-208ENST00000484913 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
PEX1-208ENST00000484913 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
PEX1-208ENST00000484913 PNMA6EA0A0J9YXQ4 647 aa13.84□□□□□ -0.19
PEX1-208ENST00000484913 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
PEX1-208ENST00000484913 NCOA3Q9Y6Q9 1424 aa13.84□□□□□ -0.19
PEX1-208ENST00000484913 DDB1Q16531 1140 aa13.84□□□□□ -0.19
PEX1-208ENST00000484913 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
PEX1-208ENST00000484913 KCNQ4P56696 695 aa13.83□□□□□ -0.2
PEX1-208ENST00000484913 NUTM1Q86Y26 1132 aa13.83□□□□□ -0.2
PEX1-208ENST00000484913 PPP1R42Q7Z4L9 355 aa13.83□□□□□ -0.2
PEX1-208ENST00000484913 GCC1Q96CN9 775 aa13.83□□□□□ -0.2
PEX1-208ENST00000484913 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
PEX1-208ENST00000484913 PA2G4Q9UQ80 394 aaKnown RBP13.83□□□□□ -0.2
PEX1-208ENST00000484913 GPTP24298 496 aa13.82□□□□□ -0.2
PEX1-208ENST00000484913 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
PEX1-208ENST00000484913 IPO9Q96P70 1041 aaKnown RBP13.82□□□□□ -0.2
PEX1-208ENST00000484913 HYPKQ9NX55 129 aa13.82□□□□□ -0.2
PEX1-208ENST00000484913 NUCB1Q02818 461 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 RPAP2Q8IXW5 612 aaPredicted RBP13.81□□□□□ -0.2
PEX1-208ENST00000484913 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 CAMTA1Q9Y6Y1 1673 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 CEMIPQ8WUJ3 1361 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 UBE3BQ7Z3V4 1068 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 DNAJC10Q8IXB1 793 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 SLIT3O75094 1523 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
PEX1-208ENST00000484913 ANKRD13DQ6ZTN6 518 aa13.8□□□□□ -0.2
PEX1-208ENST00000484913 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
PEX1-208ENST00000484913 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
PEX1-208ENST00000484913 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
PEX1-208ENST00000484913 KSR2Q6VAB6 950 aa13.8□□□□□ -0.2
PEX1-208ENST00000484913 TTLL7Q6ZT98 887 aa13.8□□□□□ -0.2
PEX1-208ENST00000484913 KDM6AO15550 1401 aaPredicted RBP13.8□□□□□ -0.2
PEX1-208ENST00000484913 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
PEX1-208ENST00000484913 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 A0A087WZG4 1122 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 PIGBQ92521 554 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 COL5A2P05997 1499 aaPredicted RBP13.78□□□□□ -0.2
PEX1-208ENST00000484913 TBC1D2BQ9UPU7 963 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 CPDO75976 1380 aa13.78□□□□□ -0.2
PEX1-208ENST00000484913 TRPM3Q9HCF6 1732 aaPredicted RBP13.77□□□□□ -0.2
PEX1-208ENST00000484913 HSP90AA1P07900 732 aaKnown RBP13.77□□□□□ -0.2
PEX1-208ENST00000484913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.21e-6■■■■□ 20.9
PEX1-208ENST00000484913 NPHP1O15259 732 aa13.77□□□□□ -0.21
PEX1-208ENST00000484913 BEND3Q5T5X7 828 aa13.76□□□□□ -0.21
PEX1-208ENST00000484913 DCTPP1Q9H773 170 aa13.76□□□□□ -0.21
PEX1-208ENST00000484913 GRM8O00222 908 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 G3BP1Q13283 466 aaKnown RBP eCLIP13.75□□□□□ -0.21
PEX1-208ENST00000484913 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 DDRGK1Q96HY6 314 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 SMIM5Q71RC9 77 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
PEX1-208ENST00000484913 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
PEX1-208ENST00000484913 BICDL1Q6ZP65 573 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 HOXB7P09629 217 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 USP21Q9UK80 565 aa13.75□□□□□ -0.21
PEX1-208ENST00000484913 STARD3NLO95772 234 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 CASC1Q6TDU7 716 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 KCNQ2O43526 872 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 CCDC8Q9H0W5 538 aaPredicted RBP13.74□□□□□ -0.21
PEX1-208ENST00000484913 RGS12O14924 1447 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
PEX1-208ENST00000484913 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
PEX1-208ENST00000484913 XIRP1Q702N8 1843 aaKnown RBP13.73□□□□□ -0.21
PEX1-208ENST00000484913 ALS2Q96Q42 1657 aa13.73□□□□□ -0.21
PEX1-208ENST00000484913 ADCY9O60503 1353 aa13.73□□□□□ -0.21
PEX1-208ENST00000484913 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
PEX1-208ENST00000484913 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
PEX1-208ENST00000484913 NEUROD6Q96NK8 337 aa13.73□□□□□ -0.21
PEX1-208ENST00000484913 HSPA1LP34931 641 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 NCAPD2Q15021 1401 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 NBPF26B4DH59 902 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 NBPF14Q5TI25 921 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 NBPF10Q6P3W6 841 aaKnown RBP13.72□□□□□ -0.21
PEX1-208ENST00000484913 AACSQ86V21 672 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 NBPF15Q8N660 670 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 OVOS2A0A0G2JMS6 1433 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 ROBO1Q9Y6N7 1651 aa13.72□□□□□ -0.21
PEX1-208ENST00000484913 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
PEX1-208ENST00000484913 MX1P20591 662 aa13.71□□□□□ -0.21
PEX1-208ENST00000484913 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.21
PEX1-208ENST00000484913 PDIA6Q15084 440 aa13.71□□□□□ -0.22
PEX1-208ENST00000484913 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.22
PEX1-208ENST00000484913 CDC45O75419 566 aa13.7□□□□□ -0.22
PEX1-208ENST00000484913 IGKV5-2P06315 115 aa13.7□□□□□ -0.22
PEX1-208ENST00000484913 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
PEX1-208ENST00000484913 ATG3Q9NT62 314 aa13.7□□□□□ -0.22
PEX1-208ENST00000484913 ZBTB1Q9Y2K1 713 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms