RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.94
HLA-DQB1-208ENST00000484729 ADAMTS7Q9UKP4 1686 aa20.95■□□□□ 0.94
HLA-DQB1-208ENST00000484729 HSPA1AP0DMV8 641 aaKnown RBP20.94■□□□□ 0.94
HLA-DQB1-208ENST00000484729 HSPA1BP0DMV9 641 aaKnown RBP20.94■□□□□ 0.94
HLA-DQB1-208ENST00000484729 GLTPD2A6NH11 291 aa20.93■□□□□ 0.94
HLA-DQB1-208ENST00000484729 VEGFAP15692 232 aaPredicted RBP20.93■□□□□ 0.94
HLA-DQB1-208ENST00000484729 LMNB1P20700 586 aa20.93■□□□□ 0.94
HLA-DQB1-208ENST00000484729 NFIXQ14938 502 aa20.92■□□□□ 0.94
HLA-DQB1-208ENST00000484729 MORC1Q86VD1 984 aa20.92■□□□□ 0.94
HLA-DQB1-208ENST00000484729 SOS1Q07889 1333 aaPredicted RBP20.91■□□□□ 0.94
HLA-DQB1-208ENST00000484729 SULT6B1Q6IMI4 303 aa20.91■□□□□ 0.94
HLA-DQB1-208ENST00000484729 ZC3H4Q9UPT8 1303 aaKnown RBP20.91■□□□□ 0.94
HLA-DQB1-208ENST00000484729 AFDNP55196 1824 aaKnown RBP20.9■□□□□ 0.94
HLA-DQB1-208ENST00000484729 CYP19A1P11511 503 aaPredicted RBP20.89■□□□□ 0.93
HLA-DQB1-208ENST00000484729 TTLL6Q8N841 843 aa20.89■□□□□ 0.93
HLA-DQB1-208ENST00000484729 SERPINB2P05120 415 aa20.88■□□□□ 0.93
HLA-DQB1-208ENST00000484729 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
HLA-DQB1-208ENST00000484729 C2CD5Q86YS7 1000 aa20.88■□□□□ 0.93
HLA-DQB1-208ENST00000484729 BCL2L12Q9HB09 334 aa20.88■□□□□ 0.93
HLA-DQB1-208ENST00000484729 LGR6Q9HBX8 967 aa20.88■□□□□ 0.93
HLA-DQB1-208ENST00000484729 NARFQ9UHQ1 456 aa20.88■□□□□ 0.93
HLA-DQB1-208ENST00000484729 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
HLA-DQB1-208ENST00000484729 POTECB2RU33 542 aa20.87■□□□□ 0.93
HLA-DQB1-208ENST00000484729 NFKBIEO00221 500 aa20.87■□□□□ 0.93
HLA-DQB1-208ENST00000484729 SCN11AQ9UI33 1791 aa20.87■□□□□ 0.93
HLA-DQB1-208ENST00000484729 COL15A1P39059 1388 aa20.86■□□□□ 0.93
HLA-DQB1-208ENST00000484729 CARMIL3Q8ND23 1372 aa20.86■□□□□ 0.93
HLA-DQB1-208ENST00000484729 SLC52A2Q9HAB3 445 aa20.86■□□□□ 0.93
HLA-DQB1-208ENST00000484729 ZBTB1Q9Y2K1 713 aa20.86■□□□□ 0.93
HLA-DQB1-208ENST00000484729 TIAM2Q8IVF5 1701 aa20.86■□□□□ 0.93
HLA-DQB1-208ENST00000484729 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
HLA-DQB1-208ENST00000484729 CCDC88AQ3V6T2 1871 aa20.85■□□□□ 0.93
HLA-DQB1-208ENST00000484729 DLEC1Q9Y238 1755 aa20.85■□□□□ 0.93
HLA-DQB1-208ENST00000484729 AKAP4Q5JQC9 854 aa20.84■□□□□ 0.93
HLA-DQB1-208ENST00000484729 BICDL1Q6ZP65 573 aa20.84■□□□□ 0.93
HLA-DQB1-208ENST00000484729 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
HLA-DQB1-208ENST00000484729 H0YIN7 160 aa20.83■□□□□ 0.93
HLA-DQB1-208ENST00000484729 IL13P35225 146 aa20.83■□□□□ 0.93
HLA-DQB1-208ENST00000484729 KIF7Q2M1P5 1343 aa20.82■□□□□ 0.92
HLA-DQB1-208ENST00000484729 RNMTO43148 476 aaKnown RBP20.81■□□□□ 0.92
HLA-DQB1-208ENST00000484729 CANXP27824 592 aaKnown RBP20.81■□□□□ 0.92
HLA-DQB1-208ENST00000484729 DPY19L2Q6NUT2 758 aa20.81■□□□□ 0.92
HLA-DQB1-208ENST00000484729 CCDC24Q8N4L8 307 aa20.8■□□□□ 0.92
HLA-DQB1-208ENST00000484729 ZNF622Q969S3 477 aaKnown RBP eCLIP20.8■□□□□ 0.92
HLA-DQB1-208ENST00000484729 MKRN1Q9UHC7 482 aaKnown RBP20.8■□□□□ 0.92
HLA-DQB1-208ENST00000484729 C21orf2O43822 256 aa20.79■□□□□ 0.92
HLA-DQB1-208ENST00000484729 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
HLA-DQB1-208ENST00000484729 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
HLA-DQB1-208ENST00000484729 POTEIP0CG38 1075 aa20.78■□□□□ 0.92
HLA-DQB1-208ENST00000484729 POTEJP0CG39 1038 aa20.78■□□□□ 0.92
HLA-DQB1-208ENST00000484729 MRC1P22897 1456 aa20.77■□□□□ 0.92
HLA-DQB1-208ENST00000484729 HMOX1P09601 288 aa20.77■□□□□ 0.92
HLA-DQB1-208ENST00000484729 TBC1D9BQ66K14 1250 aa20.77■□□□□ 0.92
HLA-DQB1-208ENST00000484729 CHADLQ6NUI6 762 aa20.76■□□□□ 0.91
HLA-DQB1-208ENST00000484729 CREBZFQ9NS37 354 aa20.76■□□□□ 0.91
HLA-DQB1-208ENST00000484729 ANKRD31Q8N7Z5 1873 aa20.75■□□□□ 0.91
HLA-DQB1-208ENST00000484729 DDNO94850 711 aaPredicted RBP20.75■□□□□ 0.91
HLA-DQB1-208ENST00000484729 EIF5P55010 431 aaKnown RBP20.74■□□□□ 0.91
HLA-DQB1-208ENST00000484729 MTHFSDQ2M296 383 aaKnown RBP20.74■□□□□ 0.91
HLA-DQB1-208ENST00000484729 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
HLA-DQB1-208ENST00000484729 VIRMAQ69YN4 1812 aaKnown RBP20.74■□□□□ 0.91
HLA-DQB1-208ENST00000484729 FOXN1O15353 648 aa20.73■□□□□ 0.91
HLA-DQB1-208ENST00000484729 PDE6BP35913 854 aa20.73■□□□□ 0.91
HLA-DQB1-208ENST00000484729 CC2D1BQ5T0F9 858 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB1-208ENST00000484729 PRR5LQ6MZQ0 368 aa20.73■□□□□ 0.91
HLA-DQB1-208ENST00000484729 BRIP1Q9BX63 1249 aa20.73■□□□□ 0.91
HLA-DQB1-208ENST00000484729 ZNF330Q9Y3S2 320 aaPredicted RBP20.73■□□□□ 0.91
HLA-DQB1-208ENST00000484729 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
HLA-DQB1-208ENST00000484729 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
HLA-DQB1-208ENST00000484729 FER1L6Q2WGJ9 1857 aa20.72■□□□□ 0.91
HLA-DQB1-208ENST00000484729 DICER1Q9UPY3 1922 aaKnown RBP20.71■□□□□ 0.91
HLA-DQB1-208ENST00000484729 A0A087WZG4 1122 aa20.71■□□□□ 0.91
HLA-DQB1-208ENST00000484729 STARD3NLO95772 234 aa20.71■□□□□ 0.91
HLA-DQB1-208ENST00000484729 TAOK3Q9H2K8 898 aa20.71■□□□□ 0.91
HLA-DQB1-208ENST00000484729 TTC5Q8N0Z6 440 aa20.7■□□□□ 0.9
HLA-DQB1-208ENST00000484729 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
HLA-DQB1-208ENST00000484729 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
HLA-DQB1-208ENST00000484729 ZNF496Q96IT1 587 aaPredicted RBP20.69■□□□□ 0.9
HLA-DQB1-208ENST00000484729 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
HLA-DQB1-208ENST00000484729 LTBP3Q9NS15 1303 aa20.69■□□□□ 0.9
HLA-DQB1-208ENST00000484729 PER1O15534 1290 aaPredicted RBP20.68■□□□□ 0.9
HLA-DQB1-208ENST00000484729 CNTNAP1P78357 1384 aa20.68■□□□□ 0.9
HLA-DQB1-208ENST00000484729 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
HLA-DQB1-208ENST00000484729 DIAPH1O60610 1272 aaKnown RBP20.67■□□□□ 0.9
HLA-DQB1-208ENST00000484729 PRPF40BQ6NWY9 871 aaKnown RBP20.67■□□□□ 0.9
HLA-DQB1-208ENST00000484729 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
HLA-DQB1-208ENST00000484729 NPHP1O15259 732 aa20.66■□□□□ 0.9
HLA-DQB1-208ENST00000484729 CNBD1Q8NA66 436 aa20.66■□□□□ 0.9
HLA-DQB1-208ENST00000484729 CNKSR1Q969H4 720 aa20.66■□□□□ 0.9
HLA-DQB1-208ENST00000484729 PASKQ96RG2 1323 aa20.66■□□□□ 0.9
HLA-DQB1-208ENST00000484729 CACNA1SQ13698 1873 aa20.65■□□□□ 0.9
HLA-DQB1-208ENST00000484729 HEG1Q9ULI3 1381 aa20.65■□□□□ 0.9
HLA-DQB1-208ENST00000484729 A1BGP04217 495 aa20.65■□□□□ 0.9
HLA-DQB1-208ENST00000484729 SRGNP10124 158 aa20.65■□□□□ 0.9
HLA-DQB1-208ENST00000484729 VEGFBP49765 207 aa20.65■□□□□ 0.9
HLA-DQB1-208ENST00000484729 STYK1Q6J9G0 422 aa20.65■□□□□ 0.9
HLA-DQB1-208ENST00000484729 SETDB2Q96T68 719 aa20.65■□□□□ 0.9
HLA-DQB1-208ENST00000484729 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
HLA-DQB1-208ENST00000484729 LDHDQ86WU2 507 aa20.64■□□□□ 0.89
HLA-DQB1-208ENST00000484729 TAF1DQ9H5J8 278 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms