RNA–Protein interactions for RNA: ENST00000484588.1

PPM1F-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 348 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-206ENST00000484588 CHRNA5P30532 468 aa12.98□□□□□ -0.33
PPM1F-206ENST00000484588 VEGFBP49765 207 aa12.98□□□□□ -0.33
PPM1F-206ENST00000484588 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
PPM1F-206ENST00000484588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
PPM1F-206ENST00000484588 MAP2K1Q02750 393 aaPredicted RBP12.96□□□□□ -0.33
PPM1F-206ENST00000484588 DDR1Q08345 913 aa12.96□□□□□ -0.33
PPM1F-206ENST00000484588 SPG7Q9UQ90 795 aa12.96□□□□□ -0.33
PPM1F-206ENST00000484588 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
PPM1F-206ENST00000484588 TNRC18O15417 2968 aaPredicted RBP12.95□□□□□ -0.34
PPM1F-206ENST00000484588 DLEC1Q9Y238 1755 aa12.95□□□□□ -0.34
PPM1F-206ENST00000484588 CCDC85CA6NKD9 419 aa12.95□□□□□ -0.34
PPM1F-206ENST00000484588 TMEM88BA6NKF7 163 aa12.95□□□□□ -0.34
PPM1F-206ENST00000484588 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
PPM1F-206ENST00000484588 ANKRD26Q9UPS8 1709 aa12.94□□□□□ -0.34
PPM1F-206ENST00000484588 RASSF10A6NK89 507 aa12.94□□□□□ -0.34
PPM1F-206ENST00000484588 NFKBIEO00221 500 aa12.94□□□□□ -0.34
PPM1F-206ENST00000484588 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
PPM1F-206ENST00000484588 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
PPM1F-206ENST00000484588 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
PPM1F-206ENST00000484588 SLC4A9Q96Q91 983 aa12.94□□□□□ -0.34
PPM1F-206ENST00000484588 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
PPM1F-206ENST00000484588 MYH14Q7Z406 1995 aaKnown RBP12.93□□□□□ -0.34
PPM1F-206ENST00000484588 FKBP8Q14318 412 aa12.93□□□□□ -0.34
PPM1F-206ENST00000484588 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
PPM1F-206ENST00000484588 EYA1Q99502 592 aa12.93□□□□□ -0.34
PPM1F-206ENST00000484588 THSD7BQ9C0I4 1608 aa12.92□□□□□ -0.34
PPM1F-206ENST00000484588 DICER1Q9UPY3 1922 aaKnown RBP12.92□□□□□ -0.34
PPM1F-206ENST00000484588 TM4SF1P30408 202 aa12.92□□□□□ -0.34
PPM1F-206ENST00000484588 CCDC88AQ3V6T2 1871 aa12.92□□□□□ -0.34
PPM1F-206ENST00000484588 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
PPM1F-206ENST00000484588 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
PPM1F-206ENST00000484588 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
PPM1F-206ENST00000484588 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
PPM1F-206ENST00000484588 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
PPM1F-206ENST00000484588 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
PPM1F-206ENST00000484588 PHKG2P15735 406 aa12.91□□□□□ -0.34
PPM1F-206ENST00000484588 MTHFSP49914 203 aa12.91□□□□□ -0.34
PPM1F-206ENST00000484588 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
PPM1F-206ENST00000484588 ERFEQ4G0M1 354 aa12.9□□□□□ -0.34
PPM1F-206ENST00000484588 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
PPM1F-206ENST00000484588 LTBP3Q9NS15 1303 aa12.89□□□□□ -0.35
PPM1F-206ENST00000484588 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
PPM1F-206ENST00000484588 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
PPM1F-206ENST00000484588 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
PPM1F-206ENST00000484588 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
PPM1F-206ENST00000484588 SCN4AP35499 1836 aa12.89□□□□□ -0.35
PPM1F-206ENST00000484588 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
PPM1F-206ENST00000484588 IL13P35225 146 aa12.88□□□□□ -0.35
PPM1F-206ENST00000484588 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
PPM1F-206ENST00000484588 DEFB115Q30KQ5 88 aa12.88□□□□□ -0.35
PPM1F-206ENST00000484588 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
PPM1F-206ENST00000484588 FER1L6Q2WGJ9 1857 aa12.87□□□□□ -0.35
PPM1F-206ENST00000484588 AFDNP55196 1824 aaKnown RBP12.86□□□□□ -0.35
PPM1F-206ENST00000484588 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
PPM1F-206ENST00000484588 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
PPM1F-206ENST00000484588 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
PPM1F-206ENST00000484588 ADAMTSL1Q8N6G6 1762 aa12.86□□□□□ -0.35
PPM1F-206ENST00000484588 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
PPM1F-206ENST00000484588 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
PPM1F-206ENST00000484588 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
PPM1F-206ENST00000484588 H0YIN7 160 aa12.84□□□□□ -0.35
PPM1F-206ENST00000484588 ZPR1O75312 459 aa12.84□□□□□ -0.35
PPM1F-206ENST00000484588 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
PPM1F-206ENST00000484588 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
PPM1F-206ENST00000484588 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
PPM1F-206ENST00000484588 C2CD5Q86YS7 1000 aa12.84□□□□□ -0.35
PPM1F-206ENST00000484588 CA12O43570 354 aa12.83□□□□□ -0.36
PPM1F-206ENST00000484588 NFIXQ14938 502 aa12.83□□□□□ -0.36
PPM1F-206ENST00000484588 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
PPM1F-206ENST00000484588 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
PPM1F-206ENST00000484588 CFAP53Q96M91 514 aa12.83□□□□□ -0.36
PPM1F-206ENST00000484588 TAOK3Q9H2K8 898 aa12.83□□□□□ -0.36
PPM1F-206ENST00000484588 TJP1Q07157 1748 aa12.82□□□□□ -0.36
PPM1F-206ENST00000484588 PPP2R1AP30153 589 aa12.82□□□□□ -0.36
PPM1F-206ENST00000484588 ECE1P42892 770 aa12.82□□□□□ -0.36
PPM1F-206ENST00000484588 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
PPM1F-206ENST00000484588 USPL1Q5W0Q7 1092 aa12.82□□□□□ -0.36
PPM1F-206ENST00000484588 MCOLN1Q9GZU1 580 aa12.82□□□□□ -0.36
PPM1F-206ENST00000484588 LTBP1Q14766 1721 aa12.82□□□□□ -0.36
PPM1F-206ENST00000484588 SERPINB2P05120 415 aa12.81□□□□□ -0.36
PPM1F-206ENST00000484588 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
PPM1F-206ENST00000484588 PNMA8AQ86V59 439 aaPredicted RBP12.81□□□□□ -0.36
PPM1F-206ENST00000484588 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
PPM1F-206ENST00000484588 NARFQ9UHQ1 456 aa12.81□□□□□ -0.36
PPM1F-206ENST00000484588 ABT1Q9ULW3 272 aaKnown RBP12.81□□□□□ -0.36
PPM1F-206ENST00000484588 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
PPM1F-206ENST00000484588 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
PPM1F-206ENST00000484588 HMOX1P09601 288 aa12.8□□□□□ -0.36
PPM1F-206ENST00000484588 SOGA3Q5TF21 947 aa12.8□□□□□ -0.36
PPM1F-206ENST00000484588 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
PPM1F-206ENST00000484588 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
PPM1F-206ENST00000484588 CAPNS2Q96L46 248 aa12.8□□□□□ -0.36
PPM1F-206ENST00000484588 U2SURPO15042 1029 aaKnown RBP12.79□□□□□ -0.36
PPM1F-206ENST00000484588 C21orf2O43822 256 aa12.79□□□□□ -0.36
PPM1F-206ENST00000484588 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
PPM1F-206ENST00000484588 MAP2K2P36507 400 aa12.79□□□□□ -0.36
PPM1F-206ENST00000484588 CABP4P57796 275 aa12.79□□□□□ -0.36
PPM1F-206ENST00000484588 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
PPM1F-206ENST00000484588 GPR101Q96P66 508 aaPredicted RBP12.79□□□□□ -0.36
PPM1F-206ENST00000484588 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms