RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 A0A1W2PP64 1363 aa12.06□□□□□ -0.48
DDX39B-221ENST00000484566 RGPD2P0DJD1 1756 aa12.06□□□□□ -0.48
DDX39B-221ENST00000484566 AMPHP49418 695 aa12.06□□□□□ -0.48
DDX39B-221ENST00000484566 NSD3Q9BZ95 1437 aa12.05□□□□□ -0.48
DDX39B-221ENST00000484566 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
DDX39B-221ENST00000484566 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
DDX39B-221ENST00000484566 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
DDX39B-221ENST00000484566 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
DDX39B-221ENST00000484566 HOXC9P31274 260 aa12.04□□□□□ -0.48
DDX39B-221ENST00000484566 COG3Q96JB2 828 aa12.04□□□□□ -0.48
DDX39B-221ENST00000484566 AK7Q96M32 723 aa12.04□□□□□ -0.48
DDX39B-221ENST00000484566 SLC12A5Q9H2X9 1139 aa12.04□□□□□ -0.48
DDX39B-221ENST00000484566 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
DDX39B-221ENST00000484566 MAP3K19Q56UN5 1328 aa12.04□□□□□ -0.48
DDX39B-221ENST00000484566 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
DDX39B-221ENST00000484566 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-221ENST00000484566 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
DDX39B-221ENST00000484566 RAPGEF4Q8WZA2 1011 aa12.03□□□□□ -0.48
DDX39B-221ENST00000484566 CCDC85CA6NKD9 419 aa12.02□□□□□ -0.49
DDX39B-221ENST00000484566 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
DDX39B-221ENST00000484566 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
DDX39B-221ENST00000484566 UBR3Q6ZT12 1888 aa12.02□□□□□ -0.49
DDX39B-221ENST00000484566 PHF14O94880 888 aa12.01□□□□□ -0.49
DDX39B-221ENST00000484566 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
DDX39B-221ENST00000484566 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
DDX39B-221ENST00000484566 SMC1BQ8NDV3 1235 aa12.01□□□□□ -0.49
DDX39B-221ENST00000484566 CARD11Q9BXL7 1154 aa12.01□□□□□ -0.49
DDX39B-221ENST00000484566 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
DDX39B-221ENST00000484566 SMARCC1Q92922 1105 aaPredicted RBP12□□□□□ -0.49
DDX39B-221ENST00000484566 C10orf71Q711Q0 1435 aa12□□□□□ -0.49
DDX39B-221ENST00000484566 NEUROD1Q13562 356 aa11.99□□□□□ -0.49
DDX39B-221ENST00000484566 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
DDX39B-221ENST00000484566 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
DDX39B-221ENST00000484566 ITGB4P16144 1822 aa11.99□□□□□ -0.49
DDX39B-221ENST00000484566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
DDX39B-221ENST00000484566 SSFA2P28290 1259 aa11.98□□□□□ -0.49
DDX39B-221ENST00000484566 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
DDX39B-221ENST00000484566 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
DDX39B-221ENST00000484566 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
DDX39B-221ENST00000484566 SIN3AQ96ST3 1273 aa11.98□□□□□ -0.49
DDX39B-221ENST00000484566 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
DDX39B-221ENST00000484566 LBX1P52954 281 aa11.96□□□□□ -0.49
DDX39B-221ENST00000484566 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.49
DDX39B-221ENST00000484566 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
DDX39B-221ENST00000484566 TNRC6CQ9HCJ0 1690 aaKnown RBP11.96□□□□□ -0.5
DDX39B-221ENST00000484566 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
DDX39B-221ENST00000484566 SNPHO15079 494 aa11.95□□□□□ -0.5
DDX39B-221ENST00000484566 FBLN1P23142 703 aa11.95□□□□□ -0.5
DDX39B-221ENST00000484566 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
DDX39B-221ENST00000484566 PKD1L3Q7Z443 1732 aa11.94□□□□□ -0.5
DDX39B-221ENST00000484566 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
DDX39B-221ENST00000484566 BCS1LQ9Y276 419 aa11.94□□□□□ -0.5
DDX39B-221ENST00000484566 N4BP2Q86UW6 1770 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-221ENST00000484566 FLT4P35916 1363 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
DDX39B-221ENST00000484566 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 KCPQ6ZWJ8 1503 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 GNPATO15228 680 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 CYP27B1O15528 508 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 MMP10P09238 476 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 SIK1P57059 783 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 AIDAQ96BJ3 306 aa11.93□□□□□ -0.5
DDX39B-221ENST00000484566 INSRP06213 1382 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 TGFB2P61812 414 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 SMIM5Q71RC9 77 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 LINC00116Q8NCU8 138 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 PIGBQ92521 554 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 VIRMAQ69YN4 1812 aaKnown RBP11.92□□□□□ -0.5
DDX39B-221ENST00000484566 KIF20BQ96Q89 1820 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
DDX39B-221ENST00000484566 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
DDX39B-221ENST00000484566 PDE4AP27815 886 aa11.91□□□□□ -0.5
DDX39B-221ENST00000484566 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
DDX39B-221ENST00000484566 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
DDX39B-221ENST00000484566 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
DDX39B-221ENST00000484566 MKRN1Q9UHC7 482 aaKnown RBP11.91□□□□□ -0.5
DDX39B-221ENST00000484566 FCHSD2O94868 740 aa11.9□□□□□ -0.5
DDX39B-221ENST00000484566 ATP6V1AP38606 617 aa11.9□□□□□ -0.5
DDX39B-221ENST00000484566 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
DDX39B-221ENST00000484566 HSP90AB2PQ58FF8 381 aa11.9□□□□□ -0.5
DDX39B-221ENST00000484566 WBP1LQ9NX94 342 aa11.9□□□□□ -0.5
DDX39B-221ENST00000484566 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
DDX39B-221ENST00000484566 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
DDX39B-221ENST00000484566 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
DDX39B-221ENST00000484566 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
DDX39B-221ENST00000484566 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
DDX39B-221ENST00000484566 SBF1O95248 1867 aa11.89□□□□□ -0.51
DDX39B-221ENST00000484566 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
DDX39B-221ENST00000484566 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
DDX39B-221ENST00000484566 FYB1O15117 783 aa11.88□□□□□ -0.51
DDX39B-221ENST00000484566 HSPA8P11142 646 aaKnown RBP11.88□□□□□ -0.51
DDX39B-221ENST00000484566 PRPF38BQ5VTL8 546 aaKnown RBP11.88□□□□□ -0.51
DDX39B-221ENST00000484566 NLGN1Q8N2Q7 840 aa11.88□□□□□ -0.51
DDX39B-221ENST00000484566 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
DDX39B-221ENST00000484566 TONSLQ96HA7 1378 aa11.88□□□□□ -0.51
DDX39B-221ENST00000484566 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
DDX39B-221ENST00000484566 TMF1P82094 1093 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms