RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 PIF1Q9H611 641 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 COG6Q9Y2V7 657 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 DIP2BQ9P265 1576 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 CCP110O43303 1012 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 PPFIA3O75145 1194 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 RECKO95980 971 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 RNF187Q5TA31 235 aaPredicted RBP9.82□□□□□ -0.84
CAST-210ENST00000484552 NYAP1Q6ZVC0 841 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 KLHL23Q8NBE8 558 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 SMCR8Q8TEV9 937 aaPredicted RBP9.82□□□□□ -0.84
CAST-210ENST00000484552 FMNL2Q96PY5 1086 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 LZTS2Q9BRK4 669 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 MED4Q9NPJ6 270 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 DDX56Q9NY93 547 aaKnown RBP9.82□□□□□ -0.84
CAST-210ENST00000484552 TMEM63CQ9P1W3 806 aa9.82□□□□□ -0.84
CAST-210ENST00000484552 THRAP3Q9Y2W1 955 aaKnown RBP9.82□□□□□ -0.84
CAST-210ENST00000484552 PTPRGP23470 1445 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 VPS8Q8N3P4 1428 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 HTATSF1O43719 755 aaKnown RBP9.81□□□□□ -0.84
CAST-210ENST00000484552 LDHAP00338 332 aaKnown RBP9.81□□□□□ -0.84
CAST-210ENST00000484552 LMNB1P20700 586 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 ERCC5P28715 1186 aaPredicted RBP9.81□□□□□ -0.84
CAST-210ENST00000484552 NFE2L2Q16236 605 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 CTR9Q6PD62 1173 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 SKAP1Q86WV1 359 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 FRS2Q8WU20 508 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 TMCC3Q9ULS5 477 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 ZNF652Q9Y2D9 606 aa9.81□□□□□ -0.84
CAST-210ENST00000484552 USP5P45974 858 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 RASA3Q14644 834 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.8□□□□□ -0.84
CAST-210ENST00000484552 NDUFAF2Q8N183 169 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
CAST-210ENST00000484552 TEX13AQ9BXU3 409 aaPredicted RBP9.8□□□□□ -0.84
CAST-210ENST00000484552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.8□□□□□ -0.84
CAST-210ENST00000484552 MAGEA8P43361 318 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 FAM69CQ0P6D2 419 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 GSE1Q14687 1217 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 KIAA1958Q8N8K9 716 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 DHX38Q92620 1227 aaKnown RBP9.8□□□□□ -0.84
CAST-210ENST00000484552 TTC14Q96N46 770 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 AVENQ9NQS1 362 aaPredicted RBP9.8□□□□□ -0.84
CAST-210ENST00000484552 DISP1Q96F81 1524 aa9.8□□□□□ -0.84
CAST-210ENST00000484552 VAMP4O75379 141 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 VIL1P09327 827 aaKnown RBP9.79□□□□□ -0.84
CAST-210ENST00000484552 RRM1P23921 792 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
CAST-210ENST00000484552 LRCH2Q5VUJ6 765 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 MIER1Q8N108 512 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 MYO1HQ8N1T3 1032 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 MICALL1Q8N3F8 863 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
CAST-210ENST00000484552 CEP89Q96ST8 783 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 SLC45A1Q9Y2W3 748 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 CHMP3Q9Y3E7 222 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 ABCC2Q92887 1545 aa9.79□□□□□ -0.84
CAST-210ENST00000484552 DYTNA2CJ06 578 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 CCDC159P0C7I6 412 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 CAPN2P17655 700 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 ABL2P42684 1182 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 CCDC89Q8N998 374 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 MIGA1Q8NAN2 632 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 JDP2Q8WYK2 163 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 RMI1Q9H9A7 625 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 BRMS1Q9HCU9 246 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 UGGT2Q9NYU1 1516 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 UHRF1BP1LA0JNW5 1464 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 IFRD1O00458 451 aaPredicted RBP9.78□□□□□ -0.84
CAST-210ENST00000484552 RGS20O76081 388 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 FAM160A1Q05DH4 1040 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 NUTM2GQ5VZR2 741 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 RELL1Q8IUW5 271 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 PPM1EQ8WY54 764 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 CDHR1Q96JP9 859 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
CAST-210ENST00000484552 IFT57Q9NWB7 429 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 RABL2BQ9UNT1 228 aa9.78□□□□□ -0.84
CAST-210ENST00000484552 RBP3P10745 1247 aa9.77□□□□□ -0.85
CAST-210ENST00000484552 RPL17P18621 184 aaKnown RBP9.77□□□□□ -0.85
CAST-210ENST00000484552 PDE6BP35913 854 aa9.77□□□□□ -0.85
CAST-210ENST00000484552 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
CAST-210ENST00000484552 TMED1Q13445 227 aa9.77□□□□□ -0.85
CAST-210ENST00000484552 CCDC93Q567U6 631 aa9.77□□□□□ -0.85
CAST-210ENST00000484552 ARHGEF25Q86VW2 580 aa9.77□□□□□ -0.85
CAST-210ENST00000484552 BHMTQ93088 406 aa9.77□□□□□ -0.85
CAST-210ENST00000484552 SLC39A13Q96H72 371 aa9.77□□□□□ -0.85
CAST-210ENST00000484552 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 ANKRD18BA2A2Z9 1011 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 CCDC15Q0P6D6 951 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 ENOX2Q16206 610 aaKnown RBP9.76□□□□□ -0.85
CAST-210ENST00000484552 KANK3Q6NY19 840 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 NFXL1Q6ZNB6 911 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 MPP4Q96JB8 637 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 C8orf48Q96LL4 319 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 IWS1Q96ST2 819 aa9.76□□□□□ -0.85
CAST-210ENST00000484552 MPHOSPH6Q99547 160 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms