RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ANKMY2Q8IV38 441 aa10.2□□□□□ -0.78
CCDC66-219ENST00000484441 ZDHHC1Q8WTX9 485 aa10.2□□□□□ -0.78
CCDC66-219ENST00000484441 ZDHHC3Q9NYG2 299 aa10.2□□□□□ -0.78
CCDC66-219ENST00000484441 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
CCDC66-219ENST00000484441 DPYDQ12882 1025 aa10.19□□□□□ -0.78
CCDC66-219ENST00000484441 ERICH6Q7L0X2 663 aa10.19□□□□□ -0.78
CCDC66-219ENST00000484441 TSEN2Q8NCE0 465 aaKnown RBP10.19□□□□□ -0.78
CCDC66-219ENST00000484441 COL25A1Q9BXS0 654 aaPredicted RBP10.19□□□□□ -0.78
CCDC66-219ENST00000484441 GPAMQ9HCL2 828 aa10.19□□□□□ -0.78
CCDC66-219ENST00000484441 SERPINA10Q9UK55 444 aa10.19□□□□□ -0.78
CCDC66-219ENST00000484441 INSM1Q01101 510 aaPredicted RBP10.18□□□□□ -0.78
CCDC66-219ENST00000484441 GAS6Q14393 721 aa10.18□□□□□ -0.78
CCDC66-219ENST00000484441 RNFT1Q5M7Z0 435 aa10.18□□□□□ -0.78
CCDC66-219ENST00000484441 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
CCDC66-219ENST00000484441 TSPAN10Q9H1Z9 355 aaPredicted RBP10.18□□□□□ -0.78
CCDC66-219ENST00000484441 C1orf115Q9H7X2 142 aa10.18□□□□□ -0.78
CCDC66-219ENST00000484441 CABP1Q9NZU7 370 aa10.18□□□□□ -0.78
CCDC66-219ENST00000484441 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
CCDC66-219ENST00000484441 CCDC97Q96F63 343 aaPredicted RBP10.17□□□□□ -0.78
CCDC66-219ENST00000484441 RBM19Q9Y4C8 960 aaKnown RBP10.17□□□□□ -0.78
CCDC66-219ENST00000484441 C21orf2O43822 256 aa10.16□□□□□ -0.78
CCDC66-219ENST00000484441 RFX1P22670 979 aa10.16□□□□□ -0.78
CCDC66-219ENST00000484441 PSMA6P60900 246 aaKnown RBP10.16□□□□□ -0.78
CCDC66-219ENST00000484441 ELOAQ14241 798 aaKnown RBP10.16□□□□□ -0.78
CCDC66-219ENST00000484441 NBPF1Q3BBV0 1214 aa10.16□□□□□ -0.78
CCDC66-219ENST00000484441 EML1O00423 815 aa10.15□□□□□ -0.78
CCDC66-219ENST00000484441 NOS2P35228 1153 aa10.15□□□□□ -0.78
CCDC66-219ENST00000484441 TBCELQ5QJ74 424 aa10.15□□□□□ -0.78
CCDC66-219ENST00000484441 STAG2Q8N3U4 1231 aa10.15□□□□□ -0.78
CCDC66-219ENST00000484441 L3MBTL2Q969R5 705 aa10.15□□□□□ -0.78
CCDC66-219ENST00000484441 GTPBP3Q969Y2 492 aaKnown RBP10.15□□□□□ -0.78
CCDC66-219ENST00000484441 RUBCNLQ9H714 662 aa10.15□□□□□ -0.78
CCDC66-219ENST00000484441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.14□□□□□ -0.79
CCDC66-219ENST00000484441 CSB-PGBD3P0DP91 1061 aa10.14□□□□□ -0.79
CCDC66-219ENST00000484441 PGBD3Q8N328 593 aa10.14□□□□□ -0.79
CCDC66-219ENST00000484441 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
CCDC66-219ENST00000484441 SERTM1A2A2V5 107 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 ATG7O95352 703 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 TXLNAP40222 546 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 SH3PXD2AQ5TCZ1 1133 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 NLRP8Q86W28 1048 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 CCDC82Q8N4S0 544 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 C7orf43Q8WVR3 580 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 PBXIP1Q96AQ6 731 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 CNTNAP3BQ96NU0 1288 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 CNTNAP3Q9BZ76 1288 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 NDFIP2Q9NV92 336 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 GPC6Q9Y625 555 aaPredicted RBP10.13□□□□□ -0.79
CCDC66-219ENST00000484441 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
CCDC66-219ENST00000484441 GPR25O00155 361 aa10.12□□□□□ -0.79
CCDC66-219ENST00000484441 SLURP2P0DP57 97 aa10.12□□□□□ -0.79
CCDC66-219ENST00000484441 TATP17735 454 aaPredicted RBP10.12□□□□□ -0.79
CCDC66-219ENST00000484441 CDCA8Q53HL2 280 aa10.12□□□□□ -0.79
CCDC66-219ENST00000484441 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
CCDC66-219ENST00000484441 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
CCDC66-219ENST00000484441 AIDAQ96BJ3 306 aa10.12□□□□□ -0.79
CCDC66-219ENST00000484441 NOVA2Q9UNW9 492 aaKnown RBP10.12□□□□□ -0.79
CCDC66-219ENST00000484441 FAM200AQ8TCP9 573 aa10.11□□□□□ -0.79
CCDC66-219ENST00000484441 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
CCDC66-219ENST00000484441 ZIC5Q96T25 663 aa10.11□□□□□ -0.79
CCDC66-219ENST00000484441 C2orf49Q9BVC5 232 aaPredicted RBP10.11□□□□□ -0.79
CCDC66-219ENST00000484441 CFHR5Q9BXR6 569 aa10.11□□□□□ -0.79
CCDC66-219ENST00000484441 ATAD2Q6PL18 1390 aa10.11□□□□□ -0.79
CCDC66-219ENST00000484441 IGFBP4P22692 258 aa10.1□□□□□ -0.79
CCDC66-219ENST00000484441 ZSCAN1Q8NBB4 408 aa10.1□□□□□ -0.79
CCDC66-219ENST00000484441 MBIPQ9NS73 344 aa10.1□□□□□ -0.79
CCDC66-219ENST00000484441 A0A1W2PNR3 127 aa10.09□□□□□ -0.79
CCDC66-219ENST00000484441 PPP1R12BO60237 982 aaPredicted RBP10.09□□□□□ -0.79
CCDC66-219ENST00000484441 WEE1P30291 646 aa10.09□□□□□ -0.79
CCDC66-219ENST00000484441 SRSF11Q05519 484 aaKnown RBP10.09□□□□□ -0.79
CCDC66-219ENST00000484441 C1orf53Q5VUE5 145 aa10.09□□□□□ -0.79
CCDC66-219ENST00000484441 TIMELESSQ9UNS1 1208 aa10.09□□□□□ -0.79
CCDC66-219ENST00000484441 ZNF232Q9UNY5 417 aa10.09□□□□□ -0.79
CCDC66-219ENST00000484441 ACIN1Q9UKV3 1341 aaKnown RBP10.08□□□□□ -0.8
CCDC66-219ENST00000484441 FAM69CQ0P6D2 419 aa10.08□□□□□ -0.8
CCDC66-219ENST00000484441 SWI5Q1ZZU3 235 aa10.08□□□□□ -0.8
CCDC66-219ENST00000484441 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
CCDC66-219ENST00000484441 FIGNL1Q6PIW4 674 aa10.08□□□□□ -0.8
CCDC66-219ENST00000484441 SCG3Q8WXD2 468 aaKnown RBP10.08□□□□□ -0.8
CCDC66-219ENST00000484441 ATXN7L1Q9ULK2 861 aaPredicted RBP10.08□□□□□ -0.8
CCDC66-219ENST00000484441 CHMP3Q9Y3E7 222 aa10.08□□□□□ -0.8
CCDC66-219ENST00000484441 BNIP3LO60238 219 aa10.07□□□□□ -0.8
CCDC66-219ENST00000484441 STK32AQ8WU08 396 aa10.07□□□□□ -0.8
CCDC66-219ENST00000484441 HINFPQ9BQA5 517 aa10.07□□□□□ -0.8
CCDC66-219ENST00000484441 ZCCHC2Q9C0B9 1178 aaKnown RBP10.07□□□□□ -0.8
CCDC66-219ENST00000484441 STK17AQ9UEE5 414 aa10.07□□□□□ -0.8
CCDC66-219ENST00000484441 PHF24Q9UPV7 400 aa10.07□□□□□ -0.8
CCDC66-219ENST00000484441 ARSJQ5FYB0 599 aaPredicted RBP10.06□□□□□ -0.8
CCDC66-219ENST00000484441 PCDHGC4Q9Y5F7 938 aa10.06□□□□□ -0.8
CCDC66-219ENST00000484441 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
CCDC66-219ENST00000484441 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
CCDC66-219ENST00000484441 KLRG1Q96E93 195 aa10.05□□□□□ -0.8
CCDC66-219ENST00000484441 ABHD17AQ96GS6 310 aa10.05□□□□□ -0.8
CCDC66-219ENST00000484441 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
CCDC66-219ENST00000484441 HCN2Q9UL51 889 aa10.05□□□□□ -0.8
CCDC66-219ENST00000484441 IGF1RP08069 1367 aa10.04□□□□□ -0.8
CCDC66-219ENST00000484441 FOXO3O43524 673 aa10.04□□□□□ -0.8
CCDC66-219ENST00000484441 MX2P20592 715 aa10.04□□□□□ -0.8
CCDC66-219ENST00000484441 ATXN7O15265 892 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms