RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PARP3Q9Y6F1 533 aa10.15□□□□□ -0.78
SCAF11-207ENST00000484275 BMP4P12644 408 aa10.14□□□□□ -0.79
SCAF11-207ENST00000484275 EPHA4P54764 986 aa10.14□□□□□ -0.79
SCAF11-207ENST00000484275 WWC1Q8IX03 1113 aa10.14□□□□□ -0.79
SCAF11-207ENST00000484275 GALNT6Q8NCL4 622 aa10.14□□□□□ -0.79
SCAF11-207ENST00000484275 ZDHHC1Q8WTX9 485 aa10.14□□□□□ -0.79
SCAF11-207ENST00000484275 CABP1Q9NZU7 370 aa10.14□□□□□ -0.79
SCAF11-207ENST00000484275 PCDHGC4Q9Y5F7 938 aa10.14□□□□□ -0.79
SCAF11-207ENST00000484275 A0A1W2PNR3 127 aa10.13□□□□□ -0.79
SCAF11-207ENST00000484275 PSME1Q06323 249 aa10.13□□□□□ -0.79
SCAF11-207ENST00000484275 GPAT2Q6NUI2 795 aa10.13□□□□□ -0.79
SCAF11-207ENST00000484275 NLRP8Q86W28 1048 aa10.13□□□□□ -0.79
SCAF11-207ENST00000484275 BEND7Q8N7W2 519 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-207ENST00000484275 SCHIP1Q9P0W5 487 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-207ENST00000484275 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
SCAF11-207ENST00000484275 ZBTB7BO15156 539 aaPredicted RBP10.12□□□□□ -0.79
SCAF11-207ENST00000484275 FOXK2Q01167 660 aa10.12□□□□□ -0.79
SCAF11-207ENST00000484275 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
SCAF11-207ENST00000484275 ZIC5Q96T25 663 aa10.12□□□□□ -0.79
SCAF11-207ENST00000484275 PHF20L1A8MW92 1017 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 BACH1O14867 736 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 ITGB2P05107 769 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 HOXB4P17483 251 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-207ENST00000484275 TXLNAP40222 546 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 NBPF1Q3BBV0 1214 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 ARSJQ5FYB0 599 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-207ENST00000484275 FIGNL1Q6PIW4 674 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 EDARADDQ8WWZ3 215 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 DCAF5Q96JK2 942 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 ZDHHC3Q9NYG2 299 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
SCAF11-207ENST00000484275 GDF2Q9UK05 429 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-207ENST00000484275 DCDC2BA2VCK2 349 aa10.1□□□□□ -0.79
SCAF11-207ENST00000484275 ATXN7O15265 892 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-207ENST00000484275 MAPTP10636 758 aaKnown RBP10.1□□□□□ -0.79
SCAF11-207ENST00000484275 CLDN10P78369 228 aa10.1□□□□□ -0.79
SCAF11-207ENST00000484275 TNP2Q05952 138 aa10.1□□□□□ -0.79
SCAF11-207ENST00000484275 TBCELQ5QJ74 424 aa10.1□□□□□ -0.79
SCAF11-207ENST00000484275 TNS4Q8IZW8 715 aa10.1□□□□□ -0.79
SCAF11-207ENST00000484275 GOLGA6L1Q8N7Z2 621 aa10.1□□□□□ -0.79
SCAF11-207ENST00000484275 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
SCAF11-207ENST00000484275 USP17L3A6NCW0 530 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 USP17L4A6NCW7 530 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 CD33P20138 364 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 SUZ12Q15022 739 aaKnown RBP10.09□□□□□ -0.79
SCAF11-207ENST00000484275 USP17L2Q6R6M4 530 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 SLCO4C1Q6ZQN7 724 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 USP17L1Q7RTZ2 530 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 PODNQ7Z5L7 613 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 PLEKHM2Q8IWE5 1019 aa10.09□□□□□ -0.79
SCAF11-207ENST00000484275 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-207ENST00000484275 SH3PXD2AQ5TCZ1 1133 aa10.08□□□□□ -0.8
SCAF11-207ENST00000484275 KLF15Q9UIH9 416 aa10.08□□□□□ -0.8
SCAF11-207ENST00000484275 ATP9BO43861 1147 aa10.07□□□□□ -0.8
SCAF11-207ENST00000484275 TEAD4Q15561 434 aa10.07□□□□□ -0.8
SCAF11-207ENST00000484275 PLA2G4EQ3MJ16 856 aa10.07□□□□□ -0.8
SCAF11-207ENST00000484275 SLC9A9Q8IVB4 645 aa10.07□□□□□ -0.8
SCAF11-207ENST00000484275 FNBP4Q8N3X1 1017 aaPredicted RBP10.07□□□□□ -0.8
SCAF11-207ENST00000484275 TPCN2Q8NHX9 752 aa10.07□□□□□ -0.8
SCAF11-207ENST00000484275 C7orf43Q8WVR3 580 aa10.07□□□□□ -0.8
SCAF11-207ENST00000484275 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
SCAF11-207ENST00000484275 NEURL1BA8MQ27 555 aa10.06□□□□□ -0.8
SCAF11-207ENST00000484275 KHNYNO15037 678 aaKnown RBP10.06□□□□□ -0.8
SCAF11-207ENST00000484275 ARAFP10398 606 aa10.06□□□□□ -0.8
SCAF11-207ENST00000484275 NOS2P35228 1153 aa10.06□□□□□ -0.8
SCAF11-207ENST00000484275 TRIM50Q86XT4 487 aa10.06□□□□□ -0.8
SCAF11-207ENST00000484275 STRN4Q9NRL3 753 aa10.06□□□□□ -0.8
SCAF11-207ENST00000484275 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
SCAF11-207ENST00000484275 EPXP11678 715 aa10.05□□□□□ -0.8
SCAF11-207ENST00000484275 LOC100996750A0A140TA64 210 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 EML1O00423 815 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 DKK1O94907 266 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 IGHA1P01876 353 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 COL8A1P27658 744 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 LINC00114Q6XXX2 140 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 BICDL1Q6ZP65 573 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 KRTAP4-6Q9BYQ5 205 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 RRAGCQ9HB90 399 aa10.04□□□□□ -0.8
SCAF11-207ENST00000484275 EFSO43281 561 aa10.03□□□□□ -0.8
SCAF11-207ENST00000484275 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
SCAF11-207ENST00000484275 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
SCAF11-207ENST00000484275 BTBD6Q96KE9 485 aa10.03□□□□□ -0.8
SCAF11-207ENST00000484275 TSPAN10Q9H1Z9 355 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-207ENST00000484275 MKRN1Q9UHC7 482 aaKnown RBP10.03□□□□□ -0.8
SCAF11-207ENST00000484275 MKL2Q9ULH7 1088 aa10.03□□□□□ -0.8
SCAF11-207ENST00000484275 ATP1A2P50993 1020 aa10.02□□□□□ -0.81
SCAF11-207ENST00000484275 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.81
SCAF11-207ENST00000484275 GLMNQ92990 594 aa10.02□□□□□ -0.81
SCAF11-207ENST00000484275 GJA3Q9Y6H8 435 aa10.02□□□□□ -0.81
SCAF11-207ENST00000484275 AMPD1P23109 780 aa10.01□□□□□ -0.81
SCAF11-207ENST00000484275 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
SCAF11-207ENST00000484275 LRRC69Q6ZNQ3 347 aa10.01□□□□□ -0.81
SCAF11-207ENST00000484275 PROSER2Q86WR7 435 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-207ENST00000484275 SUV39H2Q9H5I1 410 aa10.01□□□□□ -0.81
SCAF11-207ENST00000484275 ZNF232Q9UNY5 417 aa10.01□□□□□ -0.81
SCAF11-207ENST00000484275 SERTM1A2A2V5 107 aa10□□□□□ -0.81
SCAF11-207ENST00000484275 KRBA1A5PL33 1030 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms