RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MSL1Q68DK7 614 aa9.13□□□□□ -0.95
BRCA1-216ENST00000484087 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
BRCA1-216ENST00000484087 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
BRCA1-216ENST00000484087 UBR2Q8IWV8 1755 aa9.13□□□□□ -0.95
BRCA1-216ENST00000484087 POTEJP0CG39 1038 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 U2AF1L5P0DN76 240 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-216ENST00000484087 CABP4P57796 275 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 U2AF1Q01081 240 aaKnown RBP eCLIP9.12□□□□□ -0.95
BRCA1-216ENST00000484087 SLC39A6Q13433 755 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 AMOTQ4VCS5 1084 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 DCAF5Q96JK2 942 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 TFCP2L1Q9NZI6 479 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 COL24A1Q17RW2 1714 aa9.12□□□□□ -0.95
BRCA1-216ENST00000484087 KCPQ6ZWJ8 1503 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 LOC102724428A0A0B4J2F2 783 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
BRCA1-216ENST00000484087 PTGER2P43116 358 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 SIK1P57059 783 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 AKAP4Q5JQC9 854 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 MAMSTRQ6ZN01 415 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 CFAP53Q96M91 514 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 MAP3K5Q99683 1374 aa9.11□□□□□ -0.95
BRCA1-216ENST00000484087 RNMTO43148 476 aaKnown RBP9.1□□□□□ -0.95
BRCA1-216ENST00000484087 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
BRCA1-216ENST00000484087 DCTN1Q14203 1278 aa9.1□□□□□ -0.95
BRCA1-216ENST00000484087 COL23A1Q86Y22 540 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-216ENST00000484087 SPON1Q9HCB6 807 aa9.1□□□□□ -0.95
BRCA1-216ENST00000484087 PLEKHG2Q9H7P9 1386 aa9.1□□□□□ -0.95
BRCA1-216ENST00000484087 ERVV-2B6SEH9 535 aa9.09□□□□□ -0.95
BRCA1-216ENST00000484087 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-216ENST00000484087 KLHL34Q8N239 644 aa9.09□□□□□ -0.95
BRCA1-216ENST00000484087 PPP1R1BQ9UD71 204 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-216ENST00000484087 ZNF831Q5JPB2 1677 aa9.09□□□□□ -0.95
BRCA1-216ENST00000484087 CICQ96RK0 1608 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-216ENST00000484087 SENP3-EIF4A1A0A087X0R7 540 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 GNPATO15228 680 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 HSP90AB1P08238 724 aaKnown RBP9.08□□□□□ -0.96
BRCA1-216ENST00000484087 MCM10Q7L590 875 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 SLC39A7Q92504 469 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 SMARCC1Q92922 1105 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-216ENST00000484087 AK7Q96M32 723 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 SGIP1Q9BQI5 828 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 SLC52A2Q9HAB3 445 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 KCNQ3O43525 872 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 C7P10643 843 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 IL17REQ8NFR9 667 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 FAM163AQ96GL9 167 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-216ENST00000484087 MTFR1LQ9H019 292 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 NUDCQ9Y266 331 aa9.08□□□□□ -0.96
BRCA1-216ENST00000484087 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
BRCA1-216ENST00000484087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
BRCA1-216ENST00000484087 DNAJC10Q8IXB1 793 aa9.07□□□□□ -0.96
BRCA1-216ENST00000484087 CCDC146Q8IYE0 955 aa9.07□□□□□ -0.96
BRCA1-216ENST00000484087 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
BRCA1-216ENST00000484087 KDM3BQ7LBC6 1761 aa9.06□□□□□ -0.96
BRCA1-216ENST00000484087 GNAT3A8MTJ3 354 aa9.06□□□□□ -0.96
BRCA1-216ENST00000484087 GAS2L2Q8NHY3 880 aa9.06□□□□□ -0.96
BRCA1-216ENST00000484087 FHDC1Q9C0D6 1143 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-216ENST00000484087 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
BRCA1-216ENST00000484087 ADAMTS8Q9UP79 889 aa9.06□□□□□ -0.96
BRCA1-216ENST00000484087 PRAMEF22A3QJZ6 481 aa9.05□□□□□ -0.96
BRCA1-216ENST00000484087 PIP4K2AP48426 406 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-216ENST00000484087 NGEFQ8N5V2 710 aa9.05□□□□□ -0.96
BRCA1-216ENST00000484087 PLEKHF1Q96S99 279 aa9.05□□□□□ -0.96
BRCA1-216ENST00000484087 RRP7AQ9Y3A4 280 aaKnown RBP9.05□□□□□ -0.96
BRCA1-216ENST00000484087 CRKLP46109 303 aaKnown RBP9.04□□□□□ -0.96
BRCA1-216ENST00000484087 ERICH6BQ5W0A0 696 aa9.04□□□□□ -0.96
BRCA1-216ENST00000484087 NLGN2Q8NFZ4 835 aa9.04□□□□□ -0.96
BRCA1-216ENST00000484087 ARXQ96QS3 562 aa9.04□□□□□ -0.96
BRCA1-216ENST00000484087 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
BRCA1-216ENST00000484087 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-216ENST00000484087 SRP68Q9UHB9 627 aaKnown RBP9.04□□□□□ -0.96
BRCA1-216ENST00000484087 CEMIPQ8WUJ3 1361 aa9.04□□□□□ -0.96
BRCA1-216ENST00000484087 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-216ENST00000484087 LAMB4A4D0S4 1761 aa9.03□□□□□ -0.96
BRCA1-216ENST00000484087 KIAA1551Q9HCM1 1747 aa9.03□□□□□ -0.96
BRCA1-216ENST00000484087 FCHSD2O94868 740 aa9.03□□□□□ -0.96
BRCA1-216ENST00000484087 TEFQ10587 303 aa9.03□□□□□ -0.96
BRCA1-216ENST00000484087 ZNF496Q96IT1 587 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-216ENST00000484087 SCUBE2Q9NQ36 999 aa9.03□□□□□ -0.96
BRCA1-216ENST00000484087 ZBTB1Q9Y2K1 713 aa9.03□□□□□ -0.96
BRCA1-216ENST00000484087 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-216ENST00000484087 CNTNAP4Q9C0A0 1308 aa9.02□□□□□ -0.96
BRCA1-216ENST00000484087 INTS5Q6P9B9 1019 aaKnown RBP9.02□□□□□ -0.96
BRCA1-216ENST00000484087 SPOCK2Q92563 424 aa9.02□□□□□ -0.96
BRCA1-216ENST00000484087 SYT17Q9BSW7 474 aa9.02□□□□□ -0.96
BRCA1-216ENST00000484087 SCN7AQ01118 1682 aa9.02□□□□□ -0.97
BRCA1-216ENST00000484087 AFDNP55196 1824 aaKnown RBP9.02□□□□□ -0.97
BRCA1-216ENST00000484087 BTBD11A6QL63 1104 aa9.02□□□□□ -0.97
BRCA1-216ENST00000484087 SSFA2P28290 1259 aa9.02□□□□□ -0.97
BRCA1-216ENST00000484087 NEUROD2Q15784 382 aa9.02□□□□□ -0.97
BRCA1-216ENST00000484087 ZNF790Q6PG37 636 aa9.02□□□□□ -0.97
BRCA1-216ENST00000484087 TTC5Q8N0Z6 440 aa9.02□□□□□ -0.97
BRCA1-216ENST00000484087 ARHGEF1Q92888 912 aaKnown RBP9.02□□□□□ -0.97
BRCA1-216ENST00000484087 TSPYL2Q9H2G4 693 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-216ENST00000484087 RTCBQ9Y3I0 505 aaKnown RBP9.02□□□□□ -0.97
BRCA1-216ENST00000484087 ZNF330Q9Y3S2 320 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms