RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
RTFDC1-208ENST00000484084 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
RTFDC1-208ENST00000484084 CCDC88AQ3V6T2 1871 aa11.93□□□□□ -0.5
RTFDC1-208ENST00000484084 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
RTFDC1-208ENST00000484084 ZC3H4Q9UPT8 1303 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-208ENST00000484084 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
RTFDC1-208ENST00000484084 NFKBIEO00221 500 aa11.92□□□□□ -0.5
RTFDC1-208ENST00000484084 C16orf71Q8IYS4 520 aaPredicted RBP11.92□□□□□ -0.5
RTFDC1-208ENST00000484084 VIRMAQ69YN4 1812 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-208ENST00000484084 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
RTFDC1-208ENST00000484084 CAPN15O75808 1086 aa11.91□□□□□ -0.5
RTFDC1-208ENST00000484084 SULT6B1Q6IMI4 303 aa11.91□□□□□ -0.5
RTFDC1-208ENST00000484084 PANK3Q9H999 370 aa11.91□□□□□ -0.5
RTFDC1-208ENST00000484084 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
RTFDC1-208ENST00000484084 COL11A2P13942 1736 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-208ENST00000484084 LMNB1P20700 586 aa11.9□□□□□ -0.5
RTFDC1-208ENST00000484084 SLC39A6Q13433 755 aa11.9□□□□□ -0.5
RTFDC1-208ENST00000484084 TNS4Q8IZW8 715 aa11.9□□□□□ -0.5
RTFDC1-208ENST00000484084 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
RTFDC1-208ENST00000484084 ZBTB1Q9Y2K1 713 aa11.9□□□□□ -0.5
RTFDC1-208ENST00000484084 FER1L6Q2WGJ9 1857 aa11.89□□□□□ -0.51
RTFDC1-208ENST00000484084 SERPINB2P05120 415 aa11.89□□□□□ -0.51
RTFDC1-208ENST00000484084 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-208ENST00000484084 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-208ENST00000484084 VEGFAP15692 232 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-208ENST00000484084 COL15A1P39059 1388 aa11.89□□□□□ -0.51
RTFDC1-208ENST00000484084 AKAP4Q5JQC9 854 aa11.88□□□□□ -0.51
RTFDC1-208ENST00000484084 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
RTFDC1-208ENST00000484084 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-208ENST00000484084 RNMTO43148 476 aaKnown RBP11.87□□□□□ -0.51
RTFDC1-208ENST00000484084 ZPR1O75312 459 aa11.87□□□□□ -0.51
RTFDC1-208ENST00000484084 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
RTFDC1-208ENST00000484084 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
RTFDC1-208ENST00000484084 TTLL6Q8N841 843 aa11.87□□□□□ -0.51
RTFDC1-208ENST00000484084 EIF5P55010 431 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-208ENST00000484084 C2CD5Q86YS7 1000 aa11.86□□□□□ -0.51
RTFDC1-208ENST00000484084 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
RTFDC1-208ENST00000484084 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-208ENST00000484084 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
RTFDC1-208ENST00000484084 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-208ENST00000484084 SLX4Q8IY92 1834 aa11.84□□□□□ -0.51
RTFDC1-208ENST00000484084 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-208ENST00000484084 TBC1D9BQ66K14 1250 aa11.84□□□□□ -0.51
RTFDC1-208ENST00000484084 TIMELESSQ9UNS1 1208 aa11.84□□□□□ -0.51
RTFDC1-208ENST00000484084 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
RTFDC1-208ENST00000484084 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
RTFDC1-208ENST00000484084 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
RTFDC1-208ENST00000484084 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
RTFDC1-208ENST00000484084 POLR3GLQ9BT43 218 aa11.83□□□□□ -0.52
RTFDC1-208ENST00000484084 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
RTFDC1-208ENST00000484084 ADAMTSL1Q8N6G6 1762 aa11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 H0YIN7 160 aa11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 C21orf2O43822 256 aa11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 HMOX1P09601 288 aa11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 BRIP1Q9BX63 1249 aa11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
RTFDC1-208ENST00000484084 DDNO94850 711 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-208ENST00000484084 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
RTFDC1-208ENST00000484084 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
RTFDC1-208ENST00000484084 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
RTFDC1-208ENST00000484084 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-208ENST00000484084 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
RTFDC1-208ENST00000484084 COL3A1P02461 1466 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-208ENST00000484084 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
RTFDC1-208ENST00000484084 FOXN1O15353 648 aa11.8□□□□□ -0.52
RTFDC1-208ENST00000484084 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-208ENST00000484084 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
RTFDC1-208ENST00000484084 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
RTFDC1-208ENST00000484084 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
RTFDC1-208ENST00000484084 CACNA1SQ13698 1873 aa11.8□□□□□ -0.52
RTFDC1-208ENST00000484084 PER1O15534 1290 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-208ENST00000484084 SRGNP10124 158 aa11.79□□□□□ -0.52
RTFDC1-208ENST00000484084 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-208ENST00000484084 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
RTFDC1-208ENST00000484084 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
RTFDC1-208ENST00000484084 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
RTFDC1-208ENST00000484084 SNED1Q8TER0 1413 aa11.78□□□□□ -0.52
RTFDC1-208ENST00000484084 CAMTA2O94983 1202 aa11.78□□□□□ -0.52
RTFDC1-208ENST00000484084 PDE6BP35913 854 aa11.78□□□□□ -0.52
RTFDC1-208ENST00000484084 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
RTFDC1-208ENST00000484084 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.529e-9■□□□□ 9.6
RTFDC1-208ENST00000484084 L3MBTL3Q96JM7 780 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-208ENST00000484084 SCN4AP35499 1836 aa11.77□□□□□ -0.52
RTFDC1-208ENST00000484084 KCNQ3O43525 872 aa11.77□□□□□ -0.53
RTFDC1-208ENST00000484084 A1BGP04217 495 aa11.77□□□□□ -0.53
RTFDC1-208ENST00000484084 EIF4G2P78344 907 aaKnown RBP eCLIP11.77□□□□□ -0.53
RTFDC1-208ENST00000484084 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.53
RTFDC1-208ENST00000484084 ZNF790Q6PG37 636 aa11.77□□□□□ -0.53
RTFDC1-208ENST00000484084 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
RTFDC1-208ENST00000484084 KLRG2A4D1S0 409 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-208ENST00000484084 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-208ENST00000484084 STYK1Q6J9G0 422 aa11.76□□□□□ -0.53
RTFDC1-208ENST00000484084 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
RTFDC1-208ENST00000484084 TAF1DQ9H5J8 278 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-208ENST00000484084 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
RTFDC1-208ENST00000484084 COL4A5P29400 1685 aa11.75□□□□□ -0.53
RTFDC1-208ENST00000484084 A0A087WZG4 1122 aa11.75□□□□□ -0.53
RTFDC1-208ENST00000484084 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms