RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SOS2Q07890 1332 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-207ENST00000483969 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
COL8A1-207ENST00000483969 ST8SIA5O15466 376 aa12.51□□□□□ -0.41
COL8A1-207ENST00000483969 HOXA2O43364 376 aa12.51□□□□□ -0.41
COL8A1-207ENST00000483969 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
COL8A1-207ENST00000483969 RALGAPBQ86X10 1494 aa12.51□□□□□ -0.41
COL8A1-207ENST00000483969 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
COL8A1-207ENST00000483969 AVPP01185 164 aa12.5□□□□□ -0.41
COL8A1-207ENST00000483969 TRIM32Q13049 653 aa12.5□□□□□ -0.41
COL8A1-207ENST00000483969 SPATA31A6Q5VVP1 1343 aa12.5□□□□□ -0.41
COL8A1-207ENST00000483969 PRR36Q9H6K5 1346 aa12.49□□□□□ -0.41
COL8A1-207ENST00000483969 ST20-MTHFSA0A0A6YYL1 179 aa12.49□□□□□ -0.41
COL8A1-207ENST00000483969 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
COL8A1-207ENST00000483969 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
COL8A1-207ENST00000483969 WNT7AO00755 349 aa12.48□□□□□ -0.41
COL8A1-207ENST00000483969 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-207ENST00000483969 CTC1Q2NKJ3 1217 aa12.48□□□□□ -0.41
COL8A1-207ENST00000483969 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-207ENST00000483969 PUS7Q96PZ0 661 aaKnown RBP12.47□□□□□ -0.41
COL8A1-207ENST00000483969 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-207ENST00000483969 TTC24A2A3L6 582 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-207ENST00000483969 NUTM2BA6NNL0 878 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-207ENST00000483969 NUTM2EB1AL46 878 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-207ENST00000483969 NUTM2AQ8IVF1 878 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-207ENST00000483969 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
COL8A1-207ENST00000483969 ADGRB2O60241 1585 aa12.46□□□□□ -0.42
COL8A1-207ENST00000483969 TULP4Q9NRJ4 1543 aa12.46□□□□□ -0.42
COL8A1-207ENST00000483969 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
COL8A1-207ENST00000483969 SBNO2Q9Y2G9 1366 aa12.45□□□□□ -0.42
COL8A1-207ENST00000483969 ACEP12821 1306 aa12.45□□□□□ -0.42
COL8A1-207ENST00000483969 SPATA31A3Q5VYP0 1347 aa12.45□□□□□ -0.42
COL8A1-207ENST00000483969 POTECB2RU33 542 aa12.45□□□□□ -0.42
COL8A1-207ENST00000483969 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
COL8A1-207ENST00000483969 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
COL8A1-207ENST00000483969 HLA-CQ95604 372 aa12.45□□□□□ -0.42
COL8A1-207ENST00000483969 REPIN1Q9BWE0 567 aaKnown RBP12.45□□□□□ -0.42
COL8A1-207ENST00000483969 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
COL8A1-207ENST00000483969 AXIN1O15169 862 aa12.44□□□□□ -0.42
COL8A1-207ENST00000483969 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-207ENST00000483969 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL8A1-207ENST00000483969 TMF1P82094 1093 aa12.44□□□□□ -0.42
COL8A1-207ENST00000483969 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
COL8A1-207ENST00000483969 PNPLA6Q8IY17 1366 aa12.43□□□□□ -0.42
COL8A1-207ENST00000483969 USP47Q96K76 1375 aa12.43□□□□□ -0.42
COL8A1-207ENST00000483969 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
COL8A1-207ENST00000483969 TESK2Q96S53 571 aa12.43□□□□□ -0.42
COL8A1-207ENST00000483969 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
COL8A1-207ENST00000483969 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
COL8A1-207ENST00000483969 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
COL8A1-207ENST00000483969 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
COL8A1-207ENST00000483969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL8A1-207ENST00000483969 SNIP1Q8TAD8 396 aaKnown RBP12.42□□□□□ -0.42
COL8A1-207ENST00000483969 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
COL8A1-207ENST00000483969 PPIP5K1Q6PFW1 1433 aa12.42□□□□□ -0.42
COL8A1-207ENST00000483969 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-207ENST00000483969 ATP7BP35670 1465 aa12.41□□□□□ -0.42
COL8A1-207ENST00000483969 PXDNQ92626 1479 aa12.41□□□□□ -0.42
COL8A1-207ENST00000483969 COL16A1Q07092 1604 aaPredicted RBP12.41□□□□□ -0.42
COL8A1-207ENST00000483969 JUNDP17535 347 aa12.41□□□□□ -0.42
COL8A1-207ENST00000483969 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
COL8A1-207ENST00000483969 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
COL8A1-207ENST00000483969 BRD4O60885 1362 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-207ENST00000483969 WNT7BP56706 349 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 GUCA2AQ02747 115 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-207ENST00000483969 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 CCDC24Q8N4L8 307 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 MRGPRX2Q96LB1 330 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 NHSL1Q5SYE7 1610 aa12.39□□□□□ -0.43
COL8A1-207ENST00000483969 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
COL8A1-207ENST00000483969 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
COL8A1-207ENST00000483969 HSPA5P11021 654 aaKnown RBP12.38□□□□□ -0.43
COL8A1-207ENST00000483969 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-207ENST00000483969 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
COL8A1-207ENST00000483969 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
COL8A1-207ENST00000483969 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
COL8A1-207ENST00000483969 SMPD1P17405 629 aa12.37□□□□□ -0.43
COL8A1-207ENST00000483969 NLRP13Q86W25 1043 aa12.37□□□□□ -0.43
COL8A1-207ENST00000483969 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
COL8A1-207ENST00000483969 USP32Q8NFA0 1604 aa12.36□□□□□ -0.43
COL8A1-207ENST00000483969 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-207ENST00000483969 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-207ENST00000483969 DACH1Q9UI36 760 aa12.35□□□□□ -0.43
COL8A1-207ENST00000483969 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
COL8A1-207ENST00000483969 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
COL8A1-207ENST00000483969 NINLQ9Y2I6 1382 aa12.34□□□□□ -0.43
COL8A1-207ENST00000483969 FDX1P10109 184 aa12.34□□□□□ -0.43
COL8A1-207ENST00000483969 NUTM2GQ5VZR2 741 aa12.34□□□□□ -0.43
COL8A1-207ENST00000483969 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
COL8A1-207ENST00000483969 GMPR2Q9P2T1 348 aaKnown RBP12.34□□□□□ -0.43
COL8A1-207ENST00000483969 AFF2P51816 1311 aa12.34□□□□□ -0.43
COL8A1-207ENST00000483969 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
COL8A1-207ENST00000483969 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
COL8A1-207ENST00000483969 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
COL8A1-207ENST00000483969 USP6P35125 1406 aa12.33□□□□□ -0.44
COL8A1-207ENST00000483969 LRP6O75581 1613 aa12.33□□□□□ -0.44
COL8A1-207ENST00000483969 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
COL8A1-207ENST00000483969 CPSF1Q10570 1443 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms