RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GLI3P10071 1580 aa32.91■■■□□ 2.86
SHOX2-204ENST00000483851 SKAP1Q86WV1 359 aa32.91■■■□□ 2.86
SHOX2-204ENST00000483851 ANKRD44Q8N8A2 993 aa32.91■■■□□ 2.86
SHOX2-204ENST00000483851 SPATA31A6Q5VVP1 1343 aa32.91■■■□□ 2.86
SHOX2-204ENST00000483851 PRAMEF22A3QJZ6 481 aa32.91■■■□□ 2.86
SHOX2-204ENST00000483851 DNAAF4Q8WXU2 420 aa32.91■■■□□ 2.86
SHOX2-204ENST00000483851 RGS3P49796 1198 aa32.9■■■□□ 2.86
SHOX2-204ENST00000483851 SIRT2Q8IXJ6 389 aa32.9■■■□□ 2.86
SHOX2-204ENST00000483851 ERBB4Q15303 1308 aa32.89■■■□□ 2.86
SHOX2-204ENST00000483851 SPATA31A5Q5VU36 1347 aa32.89■■■□□ 2.86
SHOX2-204ENST00000483851 SPATA31A7Q8IWB4 1347 aa32.89■■■□□ 2.86
SHOX2-204ENST00000483851 PDIA6Q15084 440 aa32.89■■■□□ 2.86
SHOX2-204ENST00000483851 DDX58O95786 925 aaKnown RBP32.88■■■□□ 2.85
SHOX2-204ENST00000483851 BARGINQ6ZT62 677 aa32.88■■■□□ 2.85
SHOX2-204ENST00000483851 PI4KAP2A4QPH2 592 aa32.87■■■□□ 2.85
SHOX2-204ENST00000483851 KSR2Q6VAB6 950 aa32.87■■■□□ 2.85
SHOX2-204ENST00000483851 PI4KAP1Q8N8J0 262 aa32.87■■■□□ 2.85
SHOX2-204ENST00000483851 SRCIN1Q9C0H9 1055 aa32.87■■■□□ 2.85
SHOX2-204ENST00000483851 TMOD3Q9NYL9 352 aa32.87■■■□□ 2.85
SHOX2-204ENST00000483851 KCPQ6ZWJ8 1503 aa32.87■■■□□ 2.85
SHOX2-204ENST00000483851 ADCY9O60503 1353 aa32.86■■■□□ 2.85
SHOX2-204ENST00000483851 GNAI2P04899 355 aa32.86■■■□□ 2.85
SHOX2-204ENST00000483851 NUCB1Q02818 461 aa32.86■■■□□ 2.85
SHOX2-204ENST00000483851 CEP85Q6P2H3 762 aa32.86■■■□□ 2.85
SHOX2-204ENST00000483851 IBTKQ9P2D0 1353 aaPredicted RBP32.85■■■□□ 2.85
SHOX2-204ENST00000483851 ANP32AP39687 249 aaKnown RBP32.84■■■□□ 2.85
SHOX2-204ENST00000483851 PROSER3Q2NL68 480 aa32.84■■■□□ 2.85
SHOX2-204ENST00000483851 ANXA1P04083 346 aa32.84■■■□□ 2.85
SHOX2-204ENST00000483851 BEND3Q5T5X7 828 aa32.84■■■□□ 2.85
SHOX2-204ENST00000483851 UNC5CLQ8IV45 518 aa32.84■■■□□ 2.85
SHOX2-204ENST00000483851 USP16Q9Y5T5 823 aa32.83■■■□□ 2.85
SHOX2-204ENST00000483851 ITGB4P16144 1822 aa32.83■■■□□ 2.85
SHOX2-204ENST00000483851 HMMRO75330 724 aa32.82■■■□□ 2.85
SHOX2-204ENST00000483851 DCTPP1Q9H773 170 aa32.82■■■□□ 2.85
SHOX2-204ENST00000483851 IPO9Q96P70 1041 aaKnown RBP32.82■■■□□ 2.84
SHOX2-204ENST00000483851 ALDH1L1O75891 902 aa32.81■■■□□ 2.84
SHOX2-204ENST00000483851 USP44Q9H0E7 712 aa32.81■■■□□ 2.84
SHOX2-204ENST00000483851 FAM161AQ3B820 660 aa32.8■■■□□ 2.84
SHOX2-204ENST00000483851 DDB1Q16531 1140 aa32.8■■■□□ 2.84
SHOX2-204ENST00000483851 CHD1LQ86WJ1 897 aa32.79■■■□□ 2.84
SHOX2-204ENST00000483851 VSIG10Q8N0Z9 540 aa32.79■■■□□ 2.84
SHOX2-204ENST00000483851 FNBP4Q8N3X1 1017 aaPredicted RBP32.79■■■□□ 2.84
SHOX2-204ENST00000483851 LRP10Q7Z4F1 713 aa32.78■■■□□ 2.84
SHOX2-204ENST00000483851 MAP3K2Q9Y2U5 619 aa32.78■■■□□ 2.84
SHOX2-204ENST00000483851 BCL9O00512 1426 aa32.78■■■□□ 2.84
SHOX2-204ENST00000483851 UBTFL1P0CB47 393 aaPredicted RBP32.77■■■□□ 2.84
SHOX2-204ENST00000483851 VPS72Q15906 364 aa32.77■■■□□ 2.84
SHOX2-204ENST00000483851 PIGBQ92521 554 aa32.77■■■□□ 2.84
SHOX2-204ENST00000483851 NGLY1Q96IV0 654 aa32.77■■■□□ 2.84
SHOX2-204ENST00000483851 TEX13AQ9BXU3 409 aaPredicted RBP32.77■■■□□ 2.84
SHOX2-204ENST00000483851 HDAC5Q9UQL6 1122 aa32.77■■■□□ 2.84
SHOX2-204ENST00000483851 BCL9LQ86UU0 1499 aa32.76■■■□□ 2.84
SHOX2-204ENST00000483851 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.76■■■□□ 2.83
SHOX2-204ENST00000483851 NOP58Q9Y2X3 529 aaKnown RBP32.76■■■□□ 2.83
SHOX2-204ENST00000483851 LINS1Q8NG48 757 aa32.75■■■□□ 2.83
SHOX2-204ENST00000483851 MYL6BP14649 208 aa32.73■■■□□ 2.83
SHOX2-204ENST00000483851 C8orf37Q96NL8 207 aa32.73■■■□□ 2.83
SHOX2-204ENST00000483851 CCDC9Q9Y3X0 531 aaKnown RBP32.73■■■□□ 2.83
SHOX2-204ENST00000483851 ATP8B2P98198 1209 aa32.72■■■□□ 2.83
SHOX2-204ENST00000483851 ANKRD45Q5TZF3 282 aa32.72■■■□□ 2.83
SHOX2-204ENST00000483851 XAGE3Q8WTP9 111 aa32.72■■■□□ 2.83
SHOX2-204ENST00000483851 ERICH6Q7L0X2 663 aa32.71■■■□□ 2.83
SHOX2-204ENST00000483851 COPS6Q7L5N1 327 aa32.71■■■□□ 2.83
SHOX2-204ENST00000483851 RIC3Q7Z5B4 369 aa32.71■■■□□ 2.83
SHOX2-204ENST00000483851 ATG3Q9NT62 314 aa32.71■■■□□ 2.83
SHOX2-204ENST00000483851 C8orf34Q49A92 452 aa32.7■■■□□ 2.83
SHOX2-204ENST00000483851 PTCD1O75127 700 aaKnown RBP32.69■■■□□ 2.82
SHOX2-204ENST00000483851 NEXNQ0ZGT2 675 aa32.69■■■□□ 2.82
SHOX2-204ENST00000483851 AIMP1Q12904 312 aaKnown RBP32.69■■■□□ 2.82
SHOX2-204ENST00000483851 ANKRD13DQ6ZTN6 518 aa32.69■■■□□ 2.82
SHOX2-204ENST00000483851 DOT1LQ8TEK3 1739 aa32.69■■■□□ 2.82
SHOX2-204ENST00000483851 LRRFIP2Q9Y608 721 aaKnown RBP32.69■■■□□ 2.82
SHOX2-204ENST00000483851 LNPKQ9C0E8 428 aa32.68■■■□□ 2.82
SHOX2-204ENST00000483851 METTL22Q9BUU2 404 aaPredicted RBP32.67■■■□□ 2.82
SHOX2-204ENST00000483851 ASAP1Q9ULH1 1129 aa32.67■■■□□ 2.82
SHOX2-204ENST00000483851 UTYO14607 1347 aa32.67■■■□□ 2.82
SHOX2-204ENST00000483851 ZBTB47Q9UFB7 747 aaPredicted RBP32.66■■■□□ 2.82
SHOX2-204ENST00000483851 PLBD2Q8NHP8 589 aa32.65■■■□□ 2.82
SHOX2-204ENST00000483851 NBPF26B4DH59 902 aa32.65■■■□□ 2.82
SHOX2-204ENST00000483851 NBPF14Q5TI25 921 aa32.65■■■□□ 2.82
SHOX2-204ENST00000483851 NBPF10Q6P3W6 841 aaKnown RBP32.65■■■□□ 2.82
SHOX2-204ENST00000483851 NBPF15Q8N660 670 aa32.65■■■□□ 2.82
SHOX2-204ENST00000483851 MARCH10Q8NA82 808 aaPredicted RBP32.64■■■□□ 2.82
SHOX2-204ENST00000483851 C9orf78Q9NZ63 289 aaPredicted RBP32.64■■■□□ 2.82
SHOX2-204ENST00000483851 NBPF7P0C2Y1 421 aaPredicted RBP32.63■■■□□ 2.81
SHOX2-204ENST00000483851 HSPA1LP34931 641 aa32.63■■■□□ 2.81
SHOX2-204ENST00000483851 ARFGEF2Q9Y6D5 1785 aa32.63■■■□□ 2.81
SHOX2-204ENST00000483851 SSH3Q8TE77 659 aa32.63■■■□□ 2.81
SHOX2-204ENST00000483851 USP21Q9UK80 565 aa32.63■■■□□ 2.81
SHOX2-204ENST00000483851 STARD3NLO95772 234 aa32.62■■■□□ 2.81
SHOX2-204ENST00000483851 PRIM1P49642 420 aaKnown RBP32.61■■■□□ 2.81
SHOX2-204ENST00000483851 GRM8O00222 908 aa32.61■■■□□ 2.81
SHOX2-204ENST00000483851 MTX1Q13505 466 aa32.61■■■□□ 2.81
SHOX2-204ENST00000483851 NEURL1BA8MQ27 555 aa32.59■■■□□ 2.81
SHOX2-204ENST00000483851 IGKV5-2P06315 115 aa32.59■■■□□ 2.81
SHOX2-204ENST00000483851 POLA2Q14181 598 aa32.59■■■□□ 2.81
SHOX2-204ENST00000483851 CWF19L2Q2TBE0 894 aaKnown RBP32.59■■■□□ 2.81
SHOX2-204ENST00000483851 PNMA6EA0A0J9YXQ4 647 aa32.59■■■□□ 2.81
SHOX2-204ENST00000483851 A1BGP04217 495 aa32.59■■■□□ 2.81
SHOX2-204ENST00000483851 NPM2Q86SE8 214 aaKnown RBP32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms