RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
LRRFIP1-212ENST00000483443 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
LRRFIP1-212ENST00000483443 RNF181Q9P0P0 153 aa17.42■□□□□ 0.38
LRRFIP1-212ENST00000483443 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
LRRFIP1-212ENST00000483443 ARFGEF1Q9Y6D6 1849 aa17.42■□□□□ 0.38
LRRFIP1-212ENST00000483443 COL15A1P39059 1388 aa17.41■□□□□ 0.38
LRRFIP1-212ENST00000483443 HMOX1P09601 288 aa17.41■□□□□ 0.38
LRRFIP1-212ENST00000483443 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
LRRFIP1-212ENST00000483443 TM4SF1P30408 202 aa17.4■□□□□ 0.38
LRRFIP1-212ENST00000483443 CHRNA5P30532 468 aa17.4■□□□□ 0.38
LRRFIP1-212ENST00000483443 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
LRRFIP1-212ENST00000483443 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
LRRFIP1-212ENST00000483443 DIAPH1O60610 1272 aaKnown RBP17.39■□□□□ 0.37
LRRFIP1-212ENST00000483443 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
LRRFIP1-212ENST00000483443 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
LRRFIP1-212ENST00000483443 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
LRRFIP1-212ENST00000483443 NARFQ9UHQ1 456 aa17.39■□□□□ 0.37
LRRFIP1-212ENST00000483443 FSTL1Q12841 308 aa17.38■□□□□ 0.37
LRRFIP1-212ENST00000483443 POTEHQ6S545 545 aa17.38■□□□□ 0.37
LRRFIP1-212ENST00000483443 ZBTB1Q9Y2K1 713 aa17.38■□□□□ 0.37
LRRFIP1-212ENST00000483443 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
LRRFIP1-212ENST00000483443 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
LRRFIP1-212ENST00000483443 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
LRRFIP1-212ENST00000483443 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
LRRFIP1-212ENST00000483443 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
LRRFIP1-212ENST00000483443 STARD3NLO95772 234 aa17.36■□□□□ 0.37
LRRFIP1-212ENST00000483443 NFIXQ14938 502 aa17.36■□□□□ 0.37
LRRFIP1-212ENST00000483443 A0A087WZG4 1122 aa17.35■□□□□ 0.37
LRRFIP1-212ENST00000483443 SERPINB2P05120 415 aa17.35■□□□□ 0.37
LRRFIP1-212ENST00000483443 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-212ENST00000483443 TEFQ10587 303 aa17.34■□□□□ 0.37
LRRFIP1-212ENST00000483443 CC2D1BQ5T0F9 858 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-212ENST00000483443 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-212ENST00000483443 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
LRRFIP1-212ENST00000483443 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
LRRFIP1-212ENST00000483443 TNRC6CQ9HCJ0 1690 aaKnown RBP17.33■□□□□ 0.37
LRRFIP1-212ENST00000483443 LMNB1P20700 586 aa17.33■□□□□ 0.36
LRRFIP1-212ENST00000483443 RASSF7Q02833 373 aa17.33■□□□□ 0.36
LRRFIP1-212ENST00000483443 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
LRRFIP1-212ENST00000483443 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
LRRFIP1-212ENST00000483443 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
LRRFIP1-212ENST00000483443 H0YIN7 160 aa17.32■□□□□ 0.36
LRRFIP1-212ENST00000483443 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
LRRFIP1-212ENST00000483443 C2CD5Q86YS7 1000 aa17.32■□□□□ 0.36
LRRFIP1-212ENST00000483443 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
LRRFIP1-212ENST00000483443 SMC1BQ8NDV3 1235 aa17.32■□□□□ 0.36
LRRFIP1-212ENST00000483443 WDR90Q96KV7 1748 aa17.31■□□□□ 0.36
LRRFIP1-212ENST00000483443 BICDL1Q6ZP65 573 aa17.31■□□□□ 0.36
LRRFIP1-212ENST00000483443 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
LRRFIP1-212ENST00000483443 NRXN2Q9P2S2 1712 aa17.3■□□□□ 0.36
LRRFIP1-212ENST00000483443 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
LRRFIP1-212ENST00000483443 DSG3P32926 999 aa17.3■□□□□ 0.36
LRRFIP1-212ENST00000483443 BCL2L12Q9HB09 334 aa17.3■□□□□ 0.36
LRRFIP1-212ENST00000483443 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
LRRFIP1-212ENST00000483443 NPHP1O15259 732 aa17.29■□□□□ 0.36
LRRFIP1-212ENST00000483443 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
LRRFIP1-212ENST00000483443 EIF5P55010 431 aaKnown RBP17.29■□□□□ 0.36
LRRFIP1-212ENST00000483443 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
LRRFIP1-212ENST00000483443 KLRG1Q96E93 195 aa17.29■□□□□ 0.36
LRRFIP1-212ENST00000483443 UBR2Q8IWV8 1755 aa17.29■□□□□ 0.36
LRRFIP1-212ENST00000483443 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 GLTPD2A6NH11 291 aa17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 PDE6BP35913 854 aa17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 DLEC1Q9Y238 1755 aa17.28■□□□□ 0.36
LRRFIP1-212ENST00000483443 VEGFAP15692 232 aaPredicted RBP17.27■□□□□ 0.36
LRRFIP1-212ENST00000483443 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.36
LRRFIP1-212ENST00000483443 ZNF622Q969S3 477 aaKnown RBP eCLIP17.27■□□□□ 0.364e-7■■■■□ 23.4
LRRFIP1-212ENST00000483443 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
LRRFIP1-212ENST00000483443 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 CAPN15O75808 1086 aa17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 IL6STP40189 918 aaPredicted RBP17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 HTRA3P83110 453 aa17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 BRIP1Q9BX63 1249 aa17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 SBF1O95248 1867 aa17.26■□□□□ 0.35
LRRFIP1-212ENST00000483443 DPY19L2Q6NUT2 758 aa17.25■□□□□ 0.35
LRRFIP1-212ENST00000483443 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
LRRFIP1-212ENST00000483443 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
LRRFIP1-212ENST00000483443 SCN7AQ01118 1682 aa17.25■□□□□ 0.35
LRRFIP1-212ENST00000483443 NFKBIEO00221 500 aa17.24■□□□□ 0.35
LRRFIP1-212ENST00000483443 ST5P78524 1137 aa17.24■□□□□ 0.35
LRRFIP1-212ENST00000483443 CNBD1Q8NA66 436 aa17.24■□□□□ 0.35
LRRFIP1-212ENST00000483443 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
LRRFIP1-212ENST00000483443 TBC1D2BQ9UPU7 963 aa17.24■□□□□ 0.35
LRRFIP1-212ENST00000483443 BTBD11A6QL63 1104 aa17.23■□□□□ 0.35
LRRFIP1-212ENST00000483443 PRR5LQ6MZQ0 368 aa17.23■□□□□ 0.35
LRRFIP1-212ENST00000483443 TIAM2Q8IVF5 1701 aa17.23■□□□□ 0.35
LRRFIP1-212ENST00000483443 C21orf2O43822 256 aa17.22■□□□□ 0.35
LRRFIP1-212ENST00000483443 SOGA3Q5TF21 947 aa17.22■□□□□ 0.35
LRRFIP1-212ENST00000483443 CNKSR1Q969H4 720 aa17.22■□□□□ 0.35
LRRFIP1-212ENST00000483443 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
LRRFIP1-212ENST00000483443 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
LRRFIP1-212ENST00000483443 PRKAR2BP31323 418 aa17.21■□□□□ 0.35
LRRFIP1-212ENST00000483443 PRELPP51888 382 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms