RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 KHSRPQ92945 711 aaKnown RBP eCLIP8.35□□□□□ -1.07
CSDE1-207ENST00000483407 CARD10Q9BWT7 1032 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 ADAM33Q9BZ11 813 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 AXIN2Q9Y2T1 843 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 ADGRG1Q9Y653 693 aa8.35□□□□□ -1.07
CSDE1-207ENST00000483407 CPSF1Q10570 1443 aaKnown RBP8.35□□□□□ -1.07
CSDE1-207ENST00000483407 EXOC5O00471 708 aa8.34□□□□□ -1.07
CSDE1-207ENST00000483407 YY1P25490 414 aa8.34□□□□□ -1.07
CSDE1-207ENST00000483407 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-207ENST00000483407 PXYLP1Q8TE99 480 aa8.34□□□□□ -1.07
CSDE1-207ENST00000483407 PARP4Q9UKK3 1724 aaKnown RBP8.34□□□□□ -1.07
CSDE1-207ENST00000483407 NINLQ9Y2I6 1382 aa8.34□□□□□ -1.07
CSDE1-207ENST00000483407 BCL9O00512 1426 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 ZNF687Q8N1G0 1237 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 MARCH10Q8NA82 808 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-207ENST00000483407 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 RREB1Q92766 1687 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 QRICH2Q9H0J4 1663 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 KTN1Q86UP2 1357 aaKnown RBP8.33□□□□□ -1.08
CSDE1-207ENST00000483407 CCDC7Q96M83 1385 aa8.33□□□□□ -1.08
CSDE1-207ENST00000483407 PRSS12P56730 875 aa8.32□□□□□ -1.08
CSDE1-207ENST00000483407 SH3D19Q5HYK7 790 aa8.32□□□□□ -1.08
CSDE1-207ENST00000483407 FAM217BQ9NTX9 383 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-207ENST00000483407 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
CSDE1-207ENST00000483407 NUP188Q5SRE5 1749 aa8.32□□□□□ -1.08
CSDE1-207ENST00000483407 TXNRD1Q16881 649 aa8.31□□□□□ -1.08
CSDE1-207ENST00000483407 PTF1AQ7RTS3 328 aa8.31□□□□□ -1.08
CSDE1-207ENST00000483407 HDGFL2Q7Z4V5 671 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-207ENST00000483407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSDE1-207ENST00000483407 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
CSDE1-207ENST00000483407 PCMTD1Q96MG8 357 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-207ENST00000483407 LRRC37A3O60309 1634 aa8.31□□□□□ -1.08
CSDE1-207ENST00000483407 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
CSDE1-207ENST00000483407 PIK3C2AO00443 1686 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 ZBTB7AO95365 584 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 FLIIQ13045 1269 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 VARS2Q5ST30 1063 aaKnown RBP8.3□□□□□ -1.08
CSDE1-207ENST00000483407 TMC1Q8TDI8 760 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 CARD11Q9BXL7 1154 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 LHX6Q9UPM6 363 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 SBNO2Q9Y2G9 1366 aa8.3□□□□□ -1.08
CSDE1-207ENST00000483407 TNS2Q63HR2 1409 aa8.29□□□□□ -1.08
CSDE1-207ENST00000483407 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
CSDE1-207ENST00000483407 IL2RBP14784 551 aa8.29□□□□□ -1.08
CSDE1-207ENST00000483407 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
CSDE1-207ENST00000483407 SLC15A2Q16348 729 aa8.29□□□□□ -1.08
CSDE1-207ENST00000483407 BEGAINQ9BUH8 593 aa8.29□□□□□ -1.08
CSDE1-207ENST00000483407 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
CSDE1-207ENST00000483407 ABCC6O95255 1503 aa8.29□□□□□ -1.08
CSDE1-207ENST00000483407 RGPD3A6NKT7 1758 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-207ENST00000483407 RGPD4Q7Z3J3 1758 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 PPP4R3BQ5MIZ7 849 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 NME9Q86XW9 330 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 RBM46Q8TBY0 533 aaKnown RBP8.28□□□□□ -1.08
CSDE1-207ENST00000483407 NLRP7Q8WX94 980 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 ACSBG1Q96GR2 724 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 MTFR1LQ9H019 292 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 TERF2IPQ9NYB0 399 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 NFAT5O94916 1531 aa8.28□□□□□ -1.08
CSDE1-207ENST00000483407 COL18A1P39060 1754 aa8.27□□□□□ -1.08
CSDE1-207ENST00000483407 ANKRD24Q8TF21 1146 aa8.27□□□□□ -1.09
CSDE1-207ENST00000483407 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-207ENST00000483407 COL9A1P20849 921 aa8.26□□□□□ -1.09
CSDE1-207ENST00000483407 PUS7Q96PZ0 661 aaKnown RBP8.26□□□□□ -1.09
CSDE1-207ENST00000483407 SLC12A5Q9H2X9 1139 aa8.26□□□□□ -1.09
CSDE1-207ENST00000483407 FAM198AQ9UFP1 575 aa8.26□□□□□ -1.09
CSDE1-207ENST00000483407 EDC4Q6P2E9 1401 aaKnown RBP8.26□□□□□ -1.09
CSDE1-207ENST00000483407 TONSLQ96HA7 1378 aa8.25□□□□□ -1.09
CSDE1-207ENST00000483407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.25□□□□□ -1.09
CSDE1-207ENST00000483407 PPP1R3GB7ZBB8 358 aa8.25□□□□□ -1.09
CSDE1-207ENST00000483407 EYA1Q99502 592 aa8.25□□□□□ -1.09
CSDE1-207ENST00000483407 SYT17Q9BSW7 474 aa8.25□□□□□ -1.09
CSDE1-207ENST00000483407 FHDC1Q9C0D6 1143 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-207ENST00000483407 CEP350Q5VT06 3117 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 SLC27A3Q5K4L6 730 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 HOMEZQ8IX15 550 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 DDX54Q8TDD1 881 aaKnown RBP8.24□□□□□ -1.09
CSDE1-207ENST00000483407 IP6K1Q92551 441 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 COG3Q96JB2 828 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 PLA2G2EQ9NZK7 142 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 AKAP12Q02952 1782 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 CD163L1Q9NR16 1453 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
CSDE1-207ENST00000483407 A0A1W2PP64 1363 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 CASZ1Q86V15 1759 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 PTPREP23469 700 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 AMPHP49418 695 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 MYSM1Q5VVJ2 828 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 SLC16A10Q8TF71 515 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 LTV1Q96GA3 475 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-207ENST00000483407 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
CSDE1-207ENST00000483407 TSKSQ9UJT2 592 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 WNK3Q9BYP7 1800 aa8.23□□□□□ -1.09
CSDE1-207ENST00000483407 RCCD1A6NED2 376 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms