RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 CACNA1FO60840 1977 aa6□□□□□ -1.45
HDAC9-224ENST00000483142 C4AP0C0L4 1744 aa6□□□□□ -1.45
HDAC9-224ENST00000483142 C4BP0C0L5 1744 aa6□□□□□ -1.45
HDAC9-224ENST00000483142 CHL1O00533 1208 aa6□□□□□ -1.45
HDAC9-224ENST00000483142 HNRNPUQ00839 825 aaKnown RBP eCLIP6□□□□□ -1.45
HDAC9-224ENST00000483142 ZNF467Q7Z7K2 595 aaPredicted RBP6□□□□□ -1.45
HDAC9-224ENST00000483142 ZNF579Q8NAF0 562 aaKnown RBP6□□□□□ -1.45
HDAC9-224ENST00000483142 RRP7AQ9Y3A4 280 aaKnown RBP6□□□□□ -1.45
HDAC9-224ENST00000483142 UBR3Q6ZT12 1888 aa6□□□□□ -1.45
HDAC9-224ENST00000483142 COL24A1Q17RW2 1714 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 PALLDQ8WX93 1383 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 E9PSI1 815 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 HOXB7P09629 217 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 GNAI1P63096 354 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 PDAP1Q13442 181 aaKnown RBP5.99□□□□□ -1.45
HDAC9-224ENST00000483142 DUSP27Q5VZP5 1158 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 CHRDL2Q6WN34 429 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 FAM196AQ6ZSG2 479 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 MCM10Q7L590 875 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 RTF1Q92541 710 aaKnown RBP5.99□□□□□ -1.45
HDAC9-224ENST00000483142 KIF12Q96FN5 646 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 MFRPQ9BY79 579 aa5.99□□□□□ -1.45
HDAC9-224ENST00000483142 PXDNLA1KZ92 1463 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 CT47B1P0C2W7 299 aaPredicted RBP5.98□□□□□ -1.45
HDAC9-224ENST00000483142 GOLGA2Q08379 1002 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 SLFN5Q08AF3 891 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 TEFQ10587 303 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 DCTN1Q14203 1278 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 MPRIPQ6WCQ1 1025 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 THUMPD2Q9BTF0 503 aaKnown RBP5.98□□□□□ -1.45
HDAC9-224ENST00000483142 LGR6Q9HBX8 967 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 MBIPQ9NS73 344 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 ERBB4Q15303 1308 aa5.98□□□□□ -1.45
HDAC9-224ENST00000483142 MYH14Q7Z406 1995 aaKnown RBP5.97□□□□□ -1.45
HDAC9-224ENST00000483142 TPRNQ4KMQ1 711 aa5.97□□□□□ -1.45
HDAC9-224ENST00000483142 IFNL1Q8IU54 200 aa5.97□□□□□ -1.45
HDAC9-224ENST00000483142 DDX54Q8TDD1 881 aaKnown RBP5.97□□□□□ -1.45
HDAC9-224ENST00000483142 PIGBQ92521 554 aa5.97□□□□□ -1.45
HDAC9-224ENST00000483142 MYH16Q9H6N6 1097 aa5.97□□□□□ -1.45
HDAC9-224ENST00000483142 TMOD3Q9NYL9 352 aa5.97□□□□□ -1.45
HDAC9-224ENST00000483142 ANKRD36CQ5JPF3 1778 aa5.97□□□□□ -1.45
HDAC9-224ENST00000483142 CASZ1Q86V15 1759 aa5.97□□□□□ -1.45
HDAC9-224ENST00000483142 IBTKQ9P2D0 1353 aaPredicted RBP5.96□□□□□ -1.45
HDAC9-224ENST00000483142 ARFGEF2Q9Y6D5 1785 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 A0A0G2JS52 829 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 PSEN1P49768 467 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 CABP4P57796 275 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 EIF4A1P60842 406 aaKnown RBP5.96□□□□□ -1.46
HDAC9-224ENST00000483142 MYT1Q01538 1121 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 TAF7Q15545 349 aaPredicted RBP5.96□□□□□ -1.46
HDAC9-224ENST00000483142 ZNF790Q6PG37 636 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 FBXO22Q8NEZ5 403 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 SMARCC1Q92922 1105 aaPredicted RBP5.96□□□□□ -1.46
HDAC9-224ENST00000483142 ZNF428Q96B54 188 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 ATG3Q9NT62 314 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 CNTNAP4Q9C0A0 1308 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 EP400Q96L91 3159 aa5.96□□□□□ -1.46
HDAC9-224ENST00000483142 LAMB2P55268 1798 aa5.95□□□□□ -1.46
HDAC9-224ENST00000483142 PLSCR1O15162 318 aa5.95□□□□□ -1.46
HDAC9-224ENST00000483142 MAP3K13O43283 966 aa5.95□□□□□ -1.46
HDAC9-224ENST00000483142 BRPF1P55201 1214 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-224ENST00000483142 NEUROD2Q15784 382 aa5.95□□□□□ -1.46
HDAC9-224ENST00000483142 ZNF496Q96IT1 587 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-224ENST00000483142 SLC4A9Q96Q91 983 aa5.95□□□□□ -1.46
HDAC9-224ENST00000483142 TSPYL4Q9UJ04 414 aa5.95□□□□□ -1.46
HDAC9-224ENST00000483142 BTBD11A6QL63 1104 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 KCNQ2O43526 872 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 GIGYF1O75420 1035 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-224ENST00000483142 PPP1R37O75864 691 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 PRIM1P49642 420 aaKnown RBP5.94□□□□□ -1.46
HDAC9-224ENST00000483142 SLC27A3Q5K4L6 730 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 PTF1AQ7RTS3 328 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 LRP10Q7Z4F1 713 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 CCDC125Q86Z20 511 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 NFATC2IPQ8NCF5 419 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 TSR2Q969E8 191 aaKnown RBP5.94□□□□□ -1.46
HDAC9-224ENST00000483142 CDCA7LQ96GN5 454 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 FMNL2Q96PY5 1086 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 RYDENQ9NUL5 291 aaKnown RBP5.94□□□□□ -1.46
HDAC9-224ENST00000483142 ASAP1Q9ULH1 1129 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 NRXN2Q9P2S2 1712 aa5.94□□□□□ -1.46
HDAC9-224ENST00000483142 LOC102724428A0A0B4J2F2 783 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 KCNQ3O43525 872 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 HMGB2P26583 209 aaKnown RBP5.93□□□□□ -1.46
HDAC9-224ENST00000483142 SIK1P57059 783 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 ALDH1L2Q3SY69 923 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 FAM182BQ5T319 152 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 TTC5Q8N0Z6 440 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 ACSBG1Q96GR2 724 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 RNF123Q5XPI4 1314 aa5.93□□□□□ -1.46
HDAC9-224ENST00000483142 ATP10DQ9P241 1426 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 VAMP4O75379 141 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 TRIM37O94972 964 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 SNRPA1P09661 255 aaKnown RBP5.92□□□□□ -1.46
HDAC9-224ENST00000483142 EXOSC9Q06265 439 aaKnown RBP5.92□□□□□ -1.46
HDAC9-224ENST00000483142 SLC39A6Q13433 755 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 ITPK1Q13572 414 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 KRT24Q2M2I5 525 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 TWISTNBQ3B726 338 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-224ENST00000483142 TSPYL6Q8N831 410 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms