RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 ARHGAP27Q6ZUM4 889 aa15.5■□□□□ 0.07
EPHB3-203ENST00000482987 CHRNA5P30532 468 aa15.49■□□□□ 0.07
EPHB3-203ENST00000482987 NFIXQ14938 502 aa15.49■□□□□ 0.07
EPHB3-203ENST00000482987 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
EPHB3-203ENST00000482987 NARFQ9UHQ1 456 aa15.49■□□□□ 0.07
EPHB3-203ENST00000482987 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
EPHB3-203ENST00000482987 GAS2L2Q8NHY3 880 aa15.48■□□□□ 0.07
EPHB3-203ENST00000482987 PHACTR3Q96KR7 559 aa15.48■□□□□ 0.07
EPHB3-203ENST00000482987 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
EPHB3-203ENST00000482987 PIM2Q9P1W9 311 aa15.48■□□□□ 0.07
EPHB3-203ENST00000482987 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
EPHB3-203ENST00000482987 ZNF790Q6PG37 636 aa15.47■□□□□ 0.07
EPHB3-203ENST00000482987 CEMIPQ8WUJ3 1361 aa15.47■□□□□ 0.07
EPHB3-203ENST00000482987 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
EPHB3-203ENST00000482987 BRCA1P38398 1863 aaKnown RBP15.46■□□□□ 0.07
EPHB3-203ENST00000482987 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
EPHB3-203ENST00000482987 EIF5P55010 431 aaKnown RBP15.46■□□□□ 0.07
EPHB3-203ENST00000482987 TEFQ10587 303 aa15.46■□□□□ 0.07
EPHB3-203ENST00000482987 DALRD3Q5D0E6 543 aaKnown RBP15.46■□□□□ 0.07
EPHB3-203ENST00000482987 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.07
EPHB3-203ENST00000482987 HEG1Q9ULI3 1381 aa15.46■□□□□ 0.07
EPHB3-203ENST00000482987 C9orf131Q5VYM1 1079 aa15.45■□□□□ 0.06
EPHB3-203ENST00000482987 KCNQ3O43525 872 aa15.44■□□□□ 0.06
EPHB3-203ENST00000482987 STARD3NLO95772 234 aa15.44■□□□□ 0.06
EPHB3-203ENST00000482987 SERPINB2P05120 415 aa15.44■□□□□ 0.06
EPHB3-203ENST00000482987 HSPA6P17066 643 aa15.44■□□□□ 0.06
EPHB3-203ENST00000482987 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
EPHB3-203ENST00000482987 CARMIL3Q8ND23 1372 aa15.44■□□□□ 0.06
EPHB3-203ENST00000482987 CFAP53Q96M91 514 aa15.43■□□□□ 0.06
EPHB3-203ENST00000482987 NMRK2Q9NPI5 230 aa15.43■□□□□ 0.06
EPHB3-203ENST00000482987 VIRMAQ69YN4 1812 aaKnown RBP15.43■□□□□ 0.06
EPHB3-203ENST00000482987 NRXN2Q9P2S2 1712 aa15.42■□□□□ 0.06
EPHB3-203ENST00000482987 A1BGP04217 495 aa15.41■□□□□ 0.06
EPHB3-203ENST00000482987 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
EPHB3-203ENST00000482987 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
EPHB3-203ENST00000482987 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
EPHB3-203ENST00000482987 BICDL1Q6ZP65 573 aa15.41■□□□□ 0.06
EPHB3-203ENST00000482987 FMNL2Q96PY5 1086 aa15.41■□□□□ 0.06
EPHB3-203ENST00000482987 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
EPHB3-203ENST00000482987 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
EPHB3-203ENST00000482987 PRELPP51888 382 aa15.4■□□□□ 0.06
EPHB3-203ENST00000482987 TEX13AQ9BXU3 409 aaPredicted RBP15.4■□□□□ 0.06
EPHB3-203ENST00000482987 RNF181Q9P0P0 153 aa15.4■□□□□ 0.06
EPHB3-203ENST00000482987 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
EPHB3-203ENST00000482987 ARFGEF1Q9Y6D6 1849 aa15.4■□□□□ 0.06
EPHB3-203ENST00000482987 A0A087WZG4 1122 aa15.39■□□□□ 0.05
EPHB3-203ENST00000482987 PRAMEF22A3QJZ6 481 aa15.39■□□□□ 0.05
EPHB3-203ENST00000482987 IL6STP40189 918 aaPredicted RBP15.39■□□□□ 0.05
EPHB3-203ENST00000482987 RASSF7Q02833 373 aa15.39■□□□□ 0.05
EPHB3-203ENST00000482987 MCM10Q7L590 875 aa15.39■□□□□ 0.05
EPHB3-203ENST00000482987 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
EPHB3-203ENST00000482987 ZNF330Q9Y3S2 320 aaPredicted RBP15.39■□□□□ 0.05
EPHB3-203ENST00000482987 TOMM70O94826 608 aa15.38■□□□□ 0.05
EPHB3-203ENST00000482987 CAMTA2O94983 1202 aa15.38■□□□□ 0.05
EPHB3-203ENST00000482987 C2CD5Q86YS7 1000 aa15.38■□□□□ 0.05
EPHB3-203ENST00000482987 USP16Q9Y5T5 823 aa15.38■□□□□ 0.05
EPHB3-203ENST00000482987 AFDNP55196 1824 aaKnown RBP15.38■□□□□ 0.05
EPHB3-203ENST00000482987 PIP4K2AP48426 406 aaPredicted RBP15.37■□□□□ 0.05
EPHB3-203ENST00000482987 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
EPHB3-203ENST00000482987 PRR5LQ6MZQ0 368 aa15.37■□□□□ 0.05
EPHB3-203ENST00000482987 CCDC24Q8N4L8 307 aa15.37■□□□□ 0.05
EPHB3-203ENST00000482987 TTLL6Q8N841 843 aa15.37■□□□□ 0.05
EPHB3-203ENST00000482987 SCN7AQ01118 1682 aa15.37■□□□□ 0.05
EPHB3-203ENST00000482987 H0YIN7 160 aa15.35■□□□□ 0.05
EPHB3-203ENST00000482987 NFKBIEO00221 500 aa15.35■□□□□ 0.05
EPHB3-203ENST00000482987 DNAJC5GQ8N7S2 189 aa15.35■□□□□ 0.05
EPHB3-203ENST00000482987 RTF1Q92541 710 aaKnown RBP15.35■□□□□ 0.05
EPHB3-203ENST00000482987 DZIP3Q86Y13 1208 aaKnown RBP15.34■□□□□ 0.05
EPHB3-203ENST00000482987 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
EPHB3-203ENST00000482987 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
EPHB3-203ENST00000482987 LMNB1P20700 586 aa15.33■□□□□ 0.04
EPHB3-203ENST00000482987 RBM46Q8TBY0 533 aaKnown RBP15.33■□□□□ 0.04
EPHB3-203ENST00000482987 KDM2BQ8NHM5 1336 aa15.33■□□□□ 0.04
EPHB3-203ENST00000482987 DLEC1Q9Y238 1755 aa15.33■□□□□ 0.04
EPHB3-203ENST00000482987 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
EPHB3-203ENST00000482987 HTATSF1O43719 755 aaKnown RBP15.32■□□□□ 0.04
EPHB3-203ENST00000482987 APLP1P51693 650 aa15.32■□□□□ 0.04
EPHB3-203ENST00000482987 NBPF10Q6P3W6 841 aaKnown RBP15.32■□□□□ 0.04
EPHB3-203ENST00000482987 NBPF15Q8N660 670 aa15.32■□□□□ 0.04
EPHB3-203ENST00000482987 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
EPHB3-203ENST00000482987 SETDB2Q96T68 719 aa15.32■□□□□ 0.04
EPHB3-203ENST00000482987 RRAGCQ9HB90 399 aa15.32■□□□□ 0.04
EPHB3-203ENST00000482987 PDE6BP35913 854 aa15.31■□□□□ 0.04
EPHB3-203ENST00000482987 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.04
EPHB3-203ENST00000482987 PLEKHF1Q96S99 279 aa15.31■□□□□ 0.04
EPHB3-203ENST00000482987 MIS18AQ9NYP9 233 aa15.31■□□□□ 0.04
EPHB3-203ENST00000482987 ZC3H4Q9UPT8 1303 aaKnown RBP15.31■□□□□ 0.04
EPHB3-203ENST00000482987 ANKRD31Q8N7Z5 1873 aa15.31■□□□□ 0.04
EPHB3-203ENST00000482987 C21orf2O43822 256 aa15.3■□□□□ 0.04
EPHB3-203ENST00000482987 COL11A2P13942 1736 aaPredicted RBP15.3■□□□□ 0.04
EPHB3-203ENST00000482987 TAF7Q15545 349 aaPredicted RBP15.3■□□□□ 0.04
EPHB3-203ENST00000482987 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
EPHB3-203ENST00000482987 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
EPHB3-203ENST00000482987 SBF1O95248 1867 aa15.29■□□□□ 0.04
EPHB3-203ENST00000482987 GLTPD2A6NH11 291 aa15.29■□□□□ 0.04
EPHB3-203ENST00000482987 SRGNP10124 158 aa15.29■□□□□ 0.04
EPHB3-203ENST00000482987 CLEC4GQ6UXB4 293 aa15.29■□□□□ 0.04
EPHB3-203ENST00000482987 C16orf71Q8IYS4 520 aaPredicted RBP15.29■□□□□ 0.04
EPHB3-203ENST00000482987 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
EPHB3-203ENST00000482987 BCORQ6W2J9 1755 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms