RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 PLIN1O60240 522 aa15.97■□□□□ 0.15
TSPAN1-208ENST00000482928 ALDH1L2Q3SY69 923 aa15.97■□□□□ 0.15
TSPAN1-208ENST00000482928 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
TSPAN1-208ENST00000482928 CHMP4AQ9BY43 222 aa15.97■□□□□ 0.15
TSPAN1-208ENST00000482928 EXOC5O00471 708 aa15.96■□□□□ 0.15
TSPAN1-208ENST00000482928 MS4A1P11836 297 aa15.96■□□□□ 0.15
TSPAN1-208ENST00000482928 CABP4P57796 275 aa15.96■□□□□ 0.15
TSPAN1-208ENST00000482928 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.14
TSPAN1-208ENST00000482928 KIF16BQ96L93 1317 aa15.95■□□□□ 0.14
TSPAN1-208ENST00000482928 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
TSPAN1-208ENST00000482928 CYP27B1O15528 508 aa15.95■□□□□ 0.14
TSPAN1-208ENST00000482928 C8orf58Q8NAV2 365 aa15.95■□□□□ 0.14
TSPAN1-208ENST00000482928 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
TSPAN1-208ENST00000482928 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
TSPAN1-208ENST00000482928 VAMP4O75379 141 aa15.94■□□□□ 0.14
TSPAN1-208ENST00000482928 ZKSCAN2Q63HK3 967 aa15.94■□□□□ 0.14
TSPAN1-208ENST00000482928 SSH1Q8WYL5 1049 aa15.94■□□□□ 0.14
TSPAN1-208ENST00000482928 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
TSPAN1-208ENST00000482928 WNK3Q9BYP7 1800 aa15.94■□□□□ 0.14
TSPAN1-208ENST00000482928 COL24A1Q17RW2 1714 aa15.94■□□□□ 0.14
TSPAN1-208ENST00000482928 POLD1P28340 1107 aa15.93■□□□□ 0.14
TSPAN1-208ENST00000482928 FTSJ3Q8IY81 847 aaKnown RBP15.93■□□□□ 0.14
TSPAN1-208ENST00000482928 TTC5Q8N0Z6 440 aa15.93■□□□□ 0.14
TSPAN1-208ENST00000482928 TSPYL6Q8N831 410 aa15.93■□□□□ 0.14
TSPAN1-208ENST00000482928 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
TSPAN1-208ENST00000482928 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
TSPAN1-208ENST00000482928 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
TSPAN1-208ENST00000482928 DDB1Q16531 1140 aa15.92■□□□□ 0.14
TSPAN1-208ENST00000482928 PROM2Q8N271 834 aa15.92■□□□□ 0.14
TSPAN1-208ENST00000482928 KDM3BQ7LBC6 1761 aa15.91■□□□□ 0.14
TSPAN1-208ENST00000482928 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
TSPAN1-208ENST00000482928 PPP4R2Q9NY27 417 aa15.91■□□□□ 0.14
TSPAN1-208ENST00000482928 ERVV-2B6SEH9 535 aa15.9■□□□□ 0.14
TSPAN1-208ENST00000482928 PDE3AQ14432 1141 aa15.9■□□□□ 0.14
TSPAN1-208ENST00000482928 KRT24Q2M2I5 525 aa15.9■□□□□ 0.14
TSPAN1-208ENST00000482928 CCDC30Q5VVM6 783 aa15.9■□□□□ 0.14
TSPAN1-208ENST00000482928 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
TSPAN1-208ENST00000482928 MRC1P22897 1456 aa15.9■□□□□ 0.14
TSPAN1-208ENST00000482928 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
TSPAN1-208ENST00000482928 NKX1-1Q15270 411 aaPredicted RBP15.89■□□□□ 0.13
TSPAN1-208ENST00000482928 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
TSPAN1-208ENST00000482928 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
TSPAN1-208ENST00000482928 SIPA1L3O60292 1781 aaPredicted RBP15.88■□□□□ 0.13
TSPAN1-208ENST00000482928 HOXB7P09629 217 aa15.88■□□□□ 0.13
TSPAN1-208ENST00000482928 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
TSPAN1-208ENST00000482928 HDGFL1Q5TGJ6 251 aa15.88■□□□□ 0.13
TSPAN1-208ENST00000482928 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
TSPAN1-208ENST00000482928 TMOD3Q9NYL9 352 aa15.88■□□□□ 0.13
TSPAN1-208ENST00000482928 TXNRD1Q16881 649 aa15.87■□□□□ 0.13
TSPAN1-208ENST00000482928 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
TSPAN1-208ENST00000482928 ATF7IPQ6VMQ6 1270 aa15.87■□□□□ 0.13
TSPAN1-208ENST00000482928 DZIP1LQ8IYY4 767 aaKnown RBP15.87■□□□□ 0.13
TSPAN1-208ENST00000482928 EXOC6Q8TAG9 804 aa15.87■□□□□ 0.13
TSPAN1-208ENST00000482928 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
TSPAN1-208ENST00000482928 C20orf194Q5TEA3 1177 aa15.86■□□□□ 0.13
TSPAN1-208ENST00000482928 RBM46Q8TBY0 533 aaKnown RBP15.86■□□□□ 0.13
TSPAN1-208ENST00000482928 CLUAP1Q96AJ1 413 aa15.86■□□□□ 0.13
TSPAN1-208ENST00000482928 API5Q9BZZ5 524 aaKnown RBP15.86■□□□□ 0.13
TSPAN1-208ENST00000482928 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
TSPAN1-208ENST00000482928 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
TSPAN1-208ENST00000482928 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
TSPAN1-208ENST00000482928 PANK1Q8TE04 598 aa15.85■□□□□ 0.13
TSPAN1-208ENST00000482928 ARHGAP45Q92619 1136 aa15.85■□□□□ 0.13
TSPAN1-208ENST00000482928 NECTIN2Q92692 538 aa15.85■□□□□ 0.13
TSPAN1-208ENST00000482928 CCDC136Q96JN2 1154 aa15.85■□□□□ 0.13
TSPAN1-208ENST00000482928 FMNL2Q96PY5 1086 aa15.85■□□□□ 0.13
TSPAN1-208ENST00000482928 KCNQ3O43525 872 aa15.84■□□□□ 0.13
TSPAN1-208ENST00000482928 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
TSPAN1-208ENST00000482928 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
TSPAN1-208ENST00000482928 SYTL4Q96C24 671 aaPredicted RBP15.84■□□□□ 0.13
TSPAN1-208ENST00000482928 QSER1Q2KHR3 1735 aa15.83■□□□□ 0.13
TSPAN1-208ENST00000482928 TRIM27P14373 513 aa15.83■□□□□ 0.12
TSPAN1-208ENST00000482928 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.12
TSPAN1-208ENST00000482928 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.12
TSPAN1-208ENST00000482928 CHMP4BQ9H444 224 aaKnown RBP15.83■□□□□ 0.12
TSPAN1-208ENST00000482928 COG6Q9Y2V7 657 aa15.83■□□□□ 0.12
TSPAN1-208ENST00000482928 PTPRCP08575 1304 aa15.83■□□□□ 0.12
TSPAN1-208ENST00000482928 SNRPA1P09661 255 aaKnown RBP15.82■□□□□ 0.12
TSPAN1-208ENST00000482928 ABHD8Q96I13 439 aa15.82■□□□□ 0.12
TSPAN1-208ENST00000482928 FSTL1Q12841 308 aa15.81■□□□□ 0.12
TSPAN1-208ENST00000482928 AAMPQ13685 434 aa15.81■□□□□ 0.12
TSPAN1-208ENST00000482928 DDX19BQ9UMR2 479 aa15.81■□□□□ 0.12
TSPAN1-208ENST00000482928 TOGARAM1Q9Y4F4 1720 aa15.8■□□□□ 0.12
TSPAN1-208ENST00000482928 MVPQ14764 893 aaKnown RBP15.8■□□□□ 0.12
TSPAN1-208ENST00000482928 ZNF496Q96IT1 587 aaPredicted RBP15.8■□□□□ 0.12
TSPAN1-208ENST00000482928 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
TSPAN1-208ENST00000482928 FKBP5Q13451 457 aaPredicted RBP15.79■□□□□ 0.12
TSPAN1-208ENST00000482928 NMRK2Q9NPI5 230 aa15.79■□□□□ 0.12
TSPAN1-208ENST00000482928 DOT1LQ8TEK3 1739 aa15.79■□□□□ 0.12
TSPAN1-208ENST00000482928 RGS19P49795 217 aa15.78■□□□□ 0.12
TSPAN1-208ENST00000482928 B4GALNT3Q6L9W6 998 aa15.78■□□□□ 0.12
TSPAN1-208ENST00000482928 MARCH10Q8NA82 808 aaPredicted RBP15.78■□□□□ 0.12
TSPAN1-208ENST00000482928 PRDM10Q9NQV6 1147 aa15.78■□□□□ 0.12
TSPAN1-208ENST00000482928 CHPF2Q9P2E5 772 aa15.78■□□□□ 0.12
TSPAN1-208ENST00000482928 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
TSPAN1-208ENST00000482928 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
TSPAN1-208ENST00000482928 CACNA1FO60840 1977 aa15.77■□□□□ 0.12
TSPAN1-208ENST00000482928 PTCD1O75127 700 aaKnown RBP15.77■□□□□ 0.12
TSPAN1-208ENST00000482928 RLBP1P12271 317 aa15.77■□□□□ 0.12
TSPAN1-208ENST00000482928 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms