RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 PARP3Q9Y6F1 533 aa20.81■□□□□ 0.92
COL16A1-212ENST00000482478 SCN7AQ01118 1682 aa20.8■□□□□ 0.92
COL16A1-212ENST00000482478 STARD3NLO95772 234 aa20.8■□□□□ 0.92
COL16A1-212ENST00000482478 YBX3P16989 372 aaKnown RBP eCLIP20.8■□□□□ 0.92
COL16A1-212ENST00000482478 CANXP27824 592 aaKnown RBP20.8■□□□□ 0.92
COL16A1-212ENST00000482478 DCTN1Q14203 1278 aa20.8■□□□□ 0.92
COL16A1-212ENST00000482478 PXDNLA1KZ92 1463 aa20.8■□□□□ 0.92
COL16A1-212ENST00000482478 KIF13BQ9NQT8 1826 aa20.79■□□□□ 0.92
COL16A1-212ENST00000482478 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
COL16A1-212ENST00000482478 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
COL16A1-212ENST00000482478 FKBP8Q14318 412 aa20.78■□□□□ 0.92
COL16A1-212ENST00000482478 GRIN3BO60391 1043 aa20.77■□□□□ 0.92
COL16A1-212ENST00000482478 USPL1Q5W0Q7 1092 aa20.77■□□□□ 0.92
COL16A1-212ENST00000482478 PNNQ9H307 717 aaKnown RBP20.77■□□□□ 0.92
COL16A1-212ENST00000482478 KIAA1551Q9HCM1 1747 aa20.77■□□□□ 0.92
COL16A1-212ENST00000482478 HTATSF1O43719 755 aaKnown RBP20.76■□□□□ 0.91
COL16A1-212ENST00000482478 LAMB4A4D0S4 1761 aa20.76■□□□□ 0.91
COL16A1-212ENST00000482478 N4BP2Q86UW6 1770 aaPredicted RBP20.75■□□□□ 0.91
COL16A1-212ENST00000482478 KCNQ3O43525 872 aa20.75■□□□□ 0.91
COL16A1-212ENST00000482478 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
COL16A1-212ENST00000482478 NPM2Q86SE8 214 aaKnown RBP20.75■□□□□ 0.91
COL16A1-212ENST00000482478 TEX13AQ9BXU3 409 aaPredicted RBP20.75■□□□□ 0.91
COL16A1-212ENST00000482478 DDR1Q08345 913 aa20.74■□□□□ 0.91
COL16A1-212ENST00000482478 PLEKHF1Q96S99 279 aa20.74■□□□□ 0.91
COL16A1-212ENST00000482478 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
COL16A1-212ENST00000482478 KDM3BQ7LBC6 1761 aa20.74■□□□□ 0.91
COL16A1-212ENST00000482478 A0A087WZG4 1122 aa20.73■□□□□ 0.91
COL16A1-212ENST00000482478 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL16A1-212ENST00000482478 BCORQ6W2J9 1755 aa20.72■□□□□ 0.91
COL16A1-212ENST00000482478 POLRMTO00411 1230 aaKnown RBP20.7■□□□□ 0.9
COL16A1-212ENST00000482478 ZNF784Q8NCA9 323 aaPredicted RBP20.7■□□□□ 0.9
COL16A1-212ENST00000482478 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
COL16A1-212ENST00000482478 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
COL16A1-212ENST00000482478 IL6STP40189 918 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-212ENST00000482478 EIF5P55010 431 aaKnown RBP20.69■□□□□ 0.9
COL16A1-212ENST00000482478 TGFB2P61812 414 aa20.69■□□□□ 0.9
COL16A1-212ENST00000482478 TAF7Q15545 349 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-212ENST00000482478 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 A1BGP04217 495 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 DPEP1P16444 411 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 PIP4K2AP48426 406 aaPredicted RBP20.68■□□□□ 0.9
COL16A1-212ENST00000482478 NFIXQ14938 502 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 CCDC146Q8IYE0 955 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 PNISRQ8TF01 805 aaKnown RBP20.68■□□□□ 0.9
COL16A1-212ENST00000482478 MIS18AQ9NYP9 233 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
COL16A1-212ENST00000482478 A0A0G2JLW4 131 aa20.67■□□□□ 0.9
COL16A1-212ENST00000482478 LMOD3Q0VAK6 560 aa20.67■□□□□ 0.9
COL16A1-212ENST00000482478 PRKRIP1Q9H875 184 aaPredicted RBP20.67■□□□□ 0.9
COL16A1-212ENST00000482478 BCL2L12Q9HB09 334 aa20.67■□□□□ 0.9
COL16A1-212ENST00000482478 NRXN2Q9P2S2 1712 aa20.67■□□□□ 0.9
COL16A1-212ENST00000482478 AFDNP55196 1824 aaKnown RBP20.67■□□□□ 0.9
COL16A1-212ENST00000482478 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
COL16A1-212ENST00000482478 TBC1D2BQ9UPU7 963 aa20.66■□□□□ 0.9
COL16A1-212ENST00000482478 CARMIL3Q8ND23 1372 aa20.65■□□□□ 0.9
COL16A1-212ENST00000482478 USP16Q9Y5T5 823 aa20.65■□□□□ 0.9
COL16A1-212ENST00000482478 RIPK4P57078 832 aa20.64■□□□□ 0.89
COL16A1-212ENST00000482478 DZIP3Q86Y13 1208 aaKnown RBP20.64■□□□□ 0.89
COL16A1-212ENST00000482478 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
COL16A1-212ENST00000482478 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
COL16A1-212ENST00000482478 NPHP1O15259 732 aa20.63■□□□□ 0.89
COL16A1-212ENST00000482478 TM4SF1P30408 202 aa20.63■□□□□ 0.89
COL16A1-212ENST00000482478 TSPYL4Q9UJ04 414 aa20.63■□□□□ 0.89
COL16A1-212ENST00000482478 SERPINB2P05120 415 aa20.62■□□□□ 0.89
COL16A1-212ENST00000482478 CHRNA5P30532 468 aa20.62■□□□□ 0.89
COL16A1-212ENST00000482478 TBC1D9BQ66K14 1250 aa20.62■□□□□ 0.89
COL16A1-212ENST00000482478 TMPOP42166 694 aaKnown RBP20.61■□□□□ 0.89
COL16A1-212ENST00000482478 NEUROD2Q15784 382 aa20.61■□□□□ 0.89
COL16A1-212ENST00000482478 ZNF652Q9Y2D9 606 aa20.61■□□□□ 0.89
COL16A1-212ENST00000482478 DLEC1Q9Y238 1755 aa20.61■□□□□ 0.89
COL16A1-212ENST00000482478 ARFGEF1Q9Y6D6 1849 aa20.6■□□□□ 0.89
COL16A1-212ENST00000482478 CAMTA2O94983 1202 aa20.6■□□□□ 0.89
COL16A1-212ENST00000482478 RUNDC1Q96C34 613 aa20.6■□□□□ 0.89
COL16A1-212ENST00000482478 PIM2Q9P1W9 311 aa20.6■□□□□ 0.89
COL16A1-212ENST00000482478 ADCY9O60503 1353 aa20.59■□□□□ 0.89
COL16A1-212ENST00000482478 DALRD3Q5D0E6 543 aaKnown RBP20.59■□□□□ 0.89
COL16A1-212ENST00000482478 COL11A2P13942 1736 aaPredicted RBP20.58■□□□□ 0.89
COL16A1-212ENST00000482478 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
COL16A1-212ENST00000482478 CNBD1Q8NA66 436 aa20.58■□□□□ 0.89
COL16A1-212ENST00000482478 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
COL16A1-212ENST00000482478 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
COL16A1-212ENST00000482478 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
COL16A1-212ENST00000482478 SETDB2Q96T68 719 aa20.57■□□□□ 0.88
COL16A1-212ENST00000482478 GIGYF1O75420 1035 aaPredicted RBP20.56■□□□□ 0.88
COL16A1-212ENST00000482478 ST5P78524 1137 aa20.56■□□□□ 0.88
COL16A1-212ENST00000482478 ARHGAP27Q6ZUM4 889 aa20.56■□□□□ 0.88
COL16A1-212ENST00000482478 C2CD5Q86YS7 1000 aa20.56■□□□□ 0.88
COL16A1-212ENST00000482478 ZNF526Q8TF50 670 aaPredicted RBP20.56■□□□□ 0.88
COL16A1-212ENST00000482478 ADAMTS8Q9UP79 889 aa20.56■□□□□ 0.88
COL16A1-212ENST00000482478 ANKRD31Q8N7Z5 1873 aa20.56■□□□□ 0.88
COL16A1-212ENST00000482478 PRR5LQ6MZQ0 368 aa20.55■□□□□ 0.88
COL16A1-212ENST00000482478 KIF6Q6ZMV9 814 aa20.55■□□□□ 0.88
COL16A1-212ENST00000482478 NGEFQ8N5V2 710 aa20.55■□□□□ 0.88
COL16A1-212ENST00000482478 KCNA3P22001 575 aa20.54■□□□□ 0.88
COL16A1-212ENST00000482478 CCDC24Q8N4L8 307 aa20.54■□□□□ 0.88
COL16A1-212ENST00000482478 LAS1LQ9Y4W2 734 aaKnown RBP20.54■□□□□ 0.88
COL16A1-212ENST00000482478 ZNF316A6NFI3 1004 aaPredicted RBP20.53■□□□□ 0.88
COL16A1-212ENST00000482478 MYL6BP14649 208 aa20.53■□□□□ 0.88
COL16A1-212ENST00000482478 NBPF5PQ86XG9 351 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms