RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 ZBTB1Q9Y2K1 713 aa27.49■■□□□ 1.99
TRA2A-206ENST00000482395 PARP3Q9Y6F1 533 aa27.49■■□□□ 1.99
TRA2A-206ENST00000482395 ZPR1O75312 459 aa27.48■■□□□ 1.99
TRA2A-206ENST00000482395 MCM10Q7L590 875 aa27.48■■□□□ 1.99
TRA2A-206ENST00000482395 C10orf71Q711Q0 1435 aa27.48■■□□□ 1.99
TRA2A-206ENST00000482395 MAPK8IP3Q9UPT6 1336 aa27.47■■□□□ 1.99
TRA2A-206ENST00000482395 KIAA1551Q9HCM1 1747 aa27.47■■□□□ 1.99
TRA2A-206ENST00000482395 SRP68Q9UHB9 627 aaKnown RBP27.46■■□□□ 1.99
TRA2A-206ENST00000482395 NARFQ9UHQ1 456 aa27.45■■□□□ 1.98
TRA2A-206ENST00000482395 TGFB2P61812 414 aa27.44■■□□□ 1.98
TRA2A-206ENST00000482395 NFE2L2Q16236 605 aa27.44■■□□□ 1.98
TRA2A-206ENST00000482395 KDM3BQ7LBC6 1761 aa27.43■■□□□ 1.98
TRA2A-206ENST00000482395 A0A087WZG4 1122 aa27.43■■□□□ 1.98
TRA2A-206ENST00000482395 YBX3P16989 372 aaKnown RBP eCLIP27.43■■□□□ 1.98
TRA2A-206ENST00000482395 N4BP2Q86UW6 1770 aaPredicted RBP27.43■■□□□ 1.98
TRA2A-206ENST00000482395 CANXP27824 592 aaKnown RBP27.42■■□□□ 1.98
TRA2A-206ENST00000482395 EIF5P55010 431 aaKnown RBP27.42■■□□□ 1.98
TRA2A-206ENST00000482395 DCTN1Q14203 1278 aa27.42■■□□□ 1.98
TRA2A-206ENST00000482395 FKBP8Q14318 412 aa27.42■■□□□ 1.98
TRA2A-206ENST00000482395 TAF7Q15545 349 aaPredicted RBP27.42■■□□□ 1.98
TRA2A-206ENST00000482395 SCN7AQ01118 1682 aa27.42■■□□□ 1.98
TRA2A-206ENST00000482395 USPL1Q5W0Q7 1092 aa27.41■■□□□ 1.98
TRA2A-206ENST00000482395 BRCA1P38398 1863 aaKnown RBP27.4■■□□□ 1.98
TRA2A-206ENST00000482395 LAMB4A4D0S4 1761 aa27.4■■□□□ 1.98
TRA2A-206ENST00000482395 PXDNLA1KZ92 1463 aa27.4■■□□□ 1.98
TRA2A-206ENST00000482395 IL6STP40189 918 aaPredicted RBP27.4■■□□□ 1.98
TRA2A-206ENST00000482395 PNISRQ8TF01 805 aaKnown RBP27.4■■□□□ 1.98
TRA2A-206ENST00000482395 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
TRA2A-206ENST00000482395 AFDNP55196 1824 aaKnown RBP27.39■■□□□ 1.98
TRA2A-206ENST00000482395 NRXN2Q9P2S2 1712 aa27.39■■□□□ 1.98
TRA2A-206ENST00000482395 KCNQ3O43525 872 aa27.39■■□□□ 1.98
TRA2A-206ENST00000482395 SNRPA1P09661 255 aaKnown RBP27.38■■□□□ 1.97
TRA2A-206ENST00000482395 TM4SF1P30408 202 aa27.38■■□□□ 1.97
TRA2A-206ENST00000482395 NPM2Q86SE8 214 aaKnown RBP27.38■■□□□ 1.97
TRA2A-206ENST00000482395 PRKRIP1Q9H875 184 aaPredicted RBP27.38■■□□□ 1.97
TRA2A-206ENST00000482395 BCORQ6W2J9 1755 aa27.36■■□□□ 1.97
TRA2A-206ENST00000482395 POLRMTO00411 1230 aaKnown RBP27.36■■□□□ 1.97
TRA2A-206ENST00000482395 DDR1Q08345 913 aa27.36■■□□□ 1.97
TRA2A-206ENST00000482395 ARFGEF1Q9Y6D6 1849 aa27.33■■□□□ 1.97
TRA2A-206ENST00000482395 LMOD3Q0VAK6 560 aa27.33■■□□□ 1.97
TRA2A-206ENST00000482395 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.97
TRA2A-206ENST00000482395 BCL2L12Q9HB09 334 aa27.33■■□□□ 1.97
TRA2A-206ENST00000482395 A1BGP04217 495 aa27.32■■□□□ 1.96
TRA2A-206ENST00000482395 NFIXQ14938 502 aa27.32■■□□□ 1.96
TRA2A-206ENST00000482395 USP16Q9Y5T5 823 aa27.32■■□□□ 1.96
TRA2A-206ENST00000482395 ZNF784Q8NCA9 323 aaPredicted RBP27.31■■□□□ 1.96
TRA2A-206ENST00000482395 ZNF330Q9Y3S2 320 aaPredicted RBP27.31■■□□□ 1.96
TRA2A-206ENST00000482395 RIPK4P57078 832 aa27.29■■□□□ 1.96
TRA2A-206ENST00000482395 A0A0G2JLW4 131 aa27.28■■□□□ 1.96
TRA2A-206ENST00000482395 DPEP1P16444 411 aa27.28■■□□□ 1.96
TRA2A-206ENST00000482395 TMPOP42166 694 aaKnown RBP27.28■■□□□ 1.96
TRA2A-206ENST00000482395 DLEC1Q9Y238 1755 aa27.27■■□□□ 1.96
TRA2A-206ENST00000482395 PRAMEF22A3QJZ6 481 aa27.27■■□□□ 1.96
TRA2A-206ENST00000482395 RUNDC1Q96C34 613 aa27.27■■□□□ 1.96
TRA2A-206ENST00000482395 MIS18AQ9NYP9 233 aa27.27■■□□□ 1.96
TRA2A-206ENST00000482395 SERPINB2P05120 415 aa27.26■■□□□ 1.95
TRA2A-206ENST00000482395 BABAM1Q9NWV8 329 aa27.26■■□□□ 1.95
TRA2A-206ENST00000482395 TBC1D2BQ9UPU7 963 aa27.26■■□□□ 1.95
TRA2A-206ENST00000482395 RGL2O15211 777 aa27.25■■□□□ 1.95
TRA2A-206ENST00000482395 DZIP3Q86Y13 1208 aaKnown RBP27.25■■□□□ 1.95
TRA2A-206ENST00000482395 THUMPD2Q9BTF0 503 aaKnown RBP27.25■■□□□ 1.95
TRA2A-206ENST00000482395 PIM2Q9P1W9 311 aa27.25■■□□□ 1.95
TRA2A-206ENST00000482395 WWC3Q9ULE0 1092 aa27.25■■□□□ 1.95
TRA2A-206ENST00000482395 BCS1LQ9Y276 419 aa27.25■■□□□ 1.95
TRA2A-206ENST00000482395 CARMIL3Q8ND23 1372 aa27.24■■□□□ 1.95
TRA2A-206ENST00000482395 CAMTA2O94983 1202 aa27.24■■□□□ 1.95
TRA2A-206ENST00000482395 EIF4A1P60842 406 aaKnown RBP27.24■■□□□ 1.95
TRA2A-206ENST00000482395 GIGYF1O75420 1035 aaPredicted RBP27.23■■□□□ 1.95
TRA2A-206ENST00000482395 KCNA3P22001 575 aa27.23■■□□□ 1.95
TRA2A-206ENST00000482395 TBC1D9BQ66K14 1250 aa27.22■■□□□ 1.95
TRA2A-206ENST00000482395 CLEC4GQ6UXB4 293 aa27.22■■□□□ 1.95
TRA2A-206ENST00000482395 TSPYL4Q9UJ04 414 aa27.22■■□□□ 1.95
TRA2A-206ENST00000482395 ZNF652Q9Y2D9 606 aa27.22■■□□□ 1.95
TRA2A-206ENST00000482395 BICDL1Q6ZP65 573 aa27.21■■□□□ 1.95
TRA2A-206ENST00000482395 CCDC146Q8IYE0 955 aa27.21■■□□□ 1.95
TRA2A-206ENST00000482395 ADAMTS8Q9UP79 889 aa27.21■■□□□ 1.95
TRA2A-206ENST00000482395 ANKRD31Q8N7Z5 1873 aa27.2■■□□□ 1.94
TRA2A-206ENST00000482395 SETDB2Q96T68 719 aa27.2■■□□□ 1.94
TRA2A-206ENST00000482395 PDZRN3Q9UPQ7 1066 aa27.2■■□□□ 1.94
TRA2A-206ENST00000482395 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
TRA2A-206ENST00000482395 NBPF26B4DH59 902 aa27.19■■□□□ 1.94
TRA2A-206ENST00000482395 PIP4K2AP48426 406 aaPredicted RBP27.19■■□□□ 1.94
TRA2A-206ENST00000482395 DALRD3Q5D0E6 543 aaKnown RBP27.19■■□□□ 1.94
TRA2A-206ENST00000482395 NBPF10Q6P3W6 841 aaKnown RBP27.19■■□□□ 1.94
TRA2A-206ENST00000482395 NBPF15Q8N660 670 aa27.19■■□□□ 1.94
TRA2A-206ENST00000482395 ADCY9O60503 1353 aa27.19■■□□□ 1.94
TRA2A-206ENST00000482395 ERBB4Q15303 1308 aa27.18■■□□□ 1.94
TRA2A-206ENST00000482395 CHRNA5P30532 468 aa27.16■■□□□ 1.94
TRA2A-206ENST00000482395 RRP7AQ9Y3A4 280 aaKnown RBP27.16■■□□□ 1.94
TRA2A-206ENST00000482395 NUP98P52948 1817 aa27.16■■□□□ 1.94
TRA2A-206ENST00000482395 NEUROD2Q15784 382 aa27.15■■□□□ 1.94
TRA2A-206ENST00000482395 ATP10DQ9P241 1426 aa27.15■■□□□ 1.94
TRA2A-206ENST00000482395 PRR5LQ6MZQ0 368 aa27.14■■□□□ 1.94
TRA2A-206ENST00000482395 CNBD1Q8NA66 436 aa27.14■■□□□ 1.94
TRA2A-206ENST00000482395 BRIP1Q9BX63 1249 aa27.14■■□□□ 1.94
TRA2A-206ENST00000482395 H0YIN7 160 aa27.13■■□□□ 1.93
TRA2A-206ENST00000482395 PDE6BP35913 854 aa27.13■■□□□ 1.93
TRA2A-206ENST00000482395 TRIM35Q9UPQ4 493 aa27.13■■□□□ 1.93
TRA2A-206ENST00000482395 NPHP1O15259 732 aa27.12■■□□□ 1.93
TRA2A-206ENST00000482395 ST5P78524 1137 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms