RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-216ENST00000481242 TRIM5Q9C035 493 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 CCDC39Q9UFE4 941 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 SHANK2Q9UPX8 1470 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 SOS1Q07889 1333 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-216ENST00000481242 SETQ01105 290 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-216ENST00000481242 AKAP4Q5JQC9 854 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 DDB1Q16531 1140 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 NOM1Q5C9Z4 860 aaKnown RBP11.11□□□□□ -0.63
GARNL3-216ENST00000481242 RAB34Q9BZG1 259 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 SYCP2Q9BX26 1530 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 ADAMTS12P58397 1594 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 TRIM21P19474 475 aaKnown RBP11.11□□□□□ -0.63
GARNL3-216ENST00000481242 CCDC152Q4G0S7 254 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 RUFY1Q96T51 708 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 BRPF3Q9ULD4 1205 aa11.11□□□□□ -0.63
GARNL3-216ENST00000481242 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 ECHDC1Q9NTX5 307 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 FLT4P35916 1363 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 NASPP49321 788 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-216ENST00000481242 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
GARNL3-216ENST00000481242 PDILTQ8N807 584 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 SMC2O95347 1197 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 TSPY26PQ9H489 355 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 ZGPATQ8N5A5 531 aaKnown RBP11.1□□□□□ -0.63
GARNL3-216ENST00000481242 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 ZMYM3Q14202 1370 aa11.1□□□□□ -0.63
GARNL3-216ENST00000481242 CBFA2T2O43439 604 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 DESP17661 470 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.09□□□□□ -0.63
GARNL3-216ENST00000481242 GSTO1P78417 241 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 STK3Q13188 491 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 KIAA0556O60303 1618 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 IL2RBP14784 551 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 CCDC12Q8WUD4 166 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-216ENST00000481242 ERCC4Q92889 916 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-216ENST00000481242 TRAPPC8Q9Y2L5 1435 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 ZNF213O14771 459 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 PRPF40AO75400 957 aaKnown RBP11.09□□□□□ -0.63
GARNL3-216ENST00000481242 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-216ENST00000481242 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 LRRFIP2Q9Y608 721 aaKnown RBP11.09□□□□□ -0.63
GARNL3-216ENST00000481242 PLEKHH1Q9ULM0 1364 aa11.09□□□□□ -0.63
GARNL3-216ENST00000481242 HSP90AB2PQ58FF8 381 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 TNMDQ9H2S6 317 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 MAP3K2Q9Y2U5 619 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 PPP1R12BO60237 982 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-216ENST00000481242 HLA-DOAP06340 250 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-216ENST00000481242 NYXQ9GZU5 481 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 MINDY4BA8MYZ0 360 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 MYO1BO43795 1136 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 MAP4K4O95819 1239 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-216ENST00000481242 CUL5Q93034 780 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
GARNL3-216ENST00000481242 RBM10P98175 930 aaKnown RBP11.07□□□□□ -0.64
GARNL3-216ENST00000481242 PPFIBP1Q86W92 1011 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 CEP57L1Q8IYX8 460 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 ZHX3Q9H4I2 956 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 CABP5Q9NP86 173 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 PI4KAP2A4QPH2 592 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 KIF20AO95235 890 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 KIF5BP33176 963 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 TEX35Q5T0J7 233 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 CAVIN1Q6NZI2 390 aaKnown RBP11.07□□□□□ -0.64
GARNL3-216ENST00000481242 PI4KAP1Q8N8J0 262 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 GPTP24298 496 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 PDE4BQ07343 736 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 KDM4AO75164 1064 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 PPP4R3AQ6IN85 833 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 MAPKBP1O60336 1514 aa11.07□□□□□ -0.64
GARNL3-216ENST00000481242 CASTP20810 708 aaKnown RBP11.06□□□□□ -0.64
GARNL3-216ENST00000481242 HSP90B2PQ58FF3 399 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 UHRF1BP1Q6BDS2 1440 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 UBE3BQ7Z3V4 1068 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 HOMEZQ8IX15 550 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 SCAND2PQ9GZW5 306 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-216ENST00000481242 NPATQ14207 1427 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 ATP10AO60312 1499 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 TCOF1Q13428 1488 aaKnown RBP11.06□□□□□ -0.64
GARNL3-216ENST00000481242 EIF2AK4Q9P2K8 1649 aaKnown RBP11.06□□□□□ -0.64
GARNL3-216ENST00000481242 SERPINC1P01008 464 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 PAF1Q8N7H5 531 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 DCAF5Q96JK2 942 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 HMG20BQ9P0W2 317 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 ZFYVE9O95405 1425 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms