RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 PTPRKQ15262 1439 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 GOLGA2Q08379 1002 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 TRDNQ13061 729 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 ZKSCAN8Q15776 578 aaPredicted RBP5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 TSR1Q2NL82 804 aaKnown RBP5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 NBPF20Q3BBV1 942 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 KLHL10Q6JEL2 608 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 CEP128Q6ZU80 1094 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 CDC42BPAQ5VT25 1732 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 TET3O43151 1660 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 ERLIN2O94905 339 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 ERCC3P19447 782 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 DAAM2Q86T65 1068 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 EXOC8Q8IYI6 725 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 SPC24Q8NBT2 197 aa5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 PNISRQ8TF01 805 aaKnown RBP5.31□□□□□ -1.56
GPCPD1-205ENST00000481038 NCAPGQ9BPX3 1015 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 ATP6V1DQ9Y5K8 247 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 KIF7Q2M1P5 1343 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 WASLO00401 505 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 CASQ1P31415 396 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 NLRP6P59044 892 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 CTNNBL1Q8WYA6 563 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 RMDN2Q96LZ7 410 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 CCDC114Q96M63 670 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 KIF2CQ99661 725 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 SH3GL3Q99963 347 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 SATB2Q9UPW6 733 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 PZPP20742 1482 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 MAP7D1Q3KQU3 841 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 SH2D4BQ5SQS7 431 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 GBP3Q9H0R5 595 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 XRCC6P12956 609 aaKnown RBP eCLIP5.3□□□□□ -1.562e-6■■■■□ 25.1
GPCPD1-205ENST00000481038 IRX5P78411 483 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 FBXO31Q5XUX0 539 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 TMEM132EQ6IEE7 984 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 NPHP3Q7Z494 1330 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 DHX16O60231 1041 aaKnown RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 MBD3O95983 291 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 HSPA4P34932 840 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 FLIIQ13045 1269 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 TRIM29Q14134 588 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 PLEKHO1Q53GL0 409 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 FAM43BQ6ZT52 329 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 USP6NLQ92738 828 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 NUDT16Q96DE0 195 aaKnown RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 DDX27Q96GQ7 796 aaKnown RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 CRACR2AQ9BSW2 395 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 PRKRIP1Q9H875 184 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 VEZTQ9HBM0 779 aa5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 SEPT11Q9NVA2 429 aaKnown RBP5.3□□□□□ -1.56
GPCPD1-205ENST00000481038 TMEM2Q9UHN6 1383 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 KIF5CO60282 957 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 PEX19P40855 299 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 PSMD2Q13200 908 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 V9GYY5 206 aaPredicted RBP5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 EFCAB6Q5THR3 1501 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 LMTK2Q8IWU2 1503 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 PRAG1Q86YV5 1406 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 DYTNA2CJ06 578 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 KCNA6P17658 529 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 IRX1P78414 480 aaPredicted RBP5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 TEFQ10587 303 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 WHAMMP3Q1A5X7 153 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 ABTB2Q8N961 1025 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 FAM210AQ96ND0 272 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 SCLT1Q96NL6 688 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 PHF8Q9UPP1 1060 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 JRKLQ9Y4A0 524 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 PLIN1O60240 522 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 RUNDC1Q96C34 613 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 ZC3H13Q5T200 1668 aaKnown RBP5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 ZNF397Q8NF99 534 aaPredicted RBP5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 TRIM5Q9C035 493 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 MYOM2P54296 1465 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 RANBP1P43487 201 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 FOSBP53539 338 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 BACH2Q9BYV9 841 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 NAT10Q9H0A0 1025 aaKnown RBP5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 C19orf44Q9H6X5 657 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 RAI14Q9P0K7 980 aa5.29□□□□□ -1.56
GPCPD1-205ENST00000481038 PFDN1O60925 122 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 VIMP08670 466 aaKnown RBP5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 CAPN2P17655 700 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 ZFYVE9O95405 1425 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 PLEKHG1Q9ULL1 1385 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 ANKRD18BA2A2Z9 1011 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 ZFYP08048 801 aaPredicted RBP5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 DHX8Q14562 1220 aaKnown RBP5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 CCDC50Q8IVM0 306 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 TTC5Q8N0Z6 440 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 EXOC6Q8TAG9 804 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 CABP2Q9NPB3 220 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 ZMYM4Q5VZL5 1548 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 GNAI1P63096 354 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 DNAJC21Q5F1R6 531 aaKnown RBP5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 POTEDQ86YR6 584 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 IQGAP3Q86VI3 1631 aa5.28□□□□□ -1.56
GPCPD1-205ENST00000481038 ANKRD36BQ8N2N9 1353 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms