RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 CHRNA5P30532 468 aa22.8■■□□□ 1.24
LSG1-208ENST00000480853 PRKAR2BP31323 418 aa22.8■■□□□ 1.24
LSG1-208ENST00000480853 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
LSG1-208ENST00000480853 RSPH6AQ9H0K4 717 aa22.8■■□□□ 1.24
LSG1-208ENST00000480853 BCL2L12Q9HB09 334 aa22.8■■□□□ 1.24
LSG1-208ENST00000480853 GPBP1L1Q9HC44 474 aaPredicted RBP22.8■■□□□ 1.24
LSG1-208ENST00000480853 GAS2L2Q8NHY3 880 aa22.79■■□□□ 1.24
LSG1-208ENST00000480853 NFIXQ14938 502 aa22.78■■□□□ 1.24
LSG1-208ENST00000480853 NARFQ9UHQ1 456 aa22.78■■□□□ 1.24
LSG1-208ENST00000480853 TEFQ10587 303 aa22.77■■□□□ 1.24
LSG1-208ENST00000480853 VSIG10Q8N0Z9 540 aa22.77■■□□□ 1.24
LSG1-208ENST00000480853 ZNF790Q6PG37 636 aa22.76■■□□□ 1.23
LSG1-208ENST00000480853 TTC5Q8N0Z6 440 aa22.76■■□□□ 1.23
LSG1-208ENST00000480853 CFAP53Q96M91 514 aa22.76■■□□□ 1.23
LSG1-208ENST00000480853 BRCA1P38398 1863 aaKnown RBP22.76■■□□□ 1.23
LSG1-208ENST00000480853 COL15A1P39059 1388 aa22.76■■□□□ 1.23
LSG1-208ENST00000480853 PIM2Q9P1W9 311 aa22.75■■□□□ 1.23
LSG1-208ENST00000480853 UBR2Q8IWV8 1755 aa22.75■■□□□ 1.23
LSG1-208ENST00000480853 U2AF1L5P0DN76 240 aaPredicted RBP22.74■■□□□ 1.23
LSG1-208ENST00000480853 U2AF1Q01081 240 aaKnown RBP eCLIP22.74■■□□□ 1.23
LSG1-208ENST00000480853 AFDNP55196 1824 aaKnown RBP22.73■■□□□ 1.23
LSG1-208ENST00000480853 EIF5P55010 431 aaKnown RBP22.73■■□□□ 1.23
LSG1-208ENST00000480853 BICDL1Q6ZP65 573 aa22.73■■□□□ 1.23
LSG1-208ENST00000480853 HEG1Q9ULI3 1381 aa22.73■■□□□ 1.23
LSG1-208ENST00000480853 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
LSG1-208ENST00000480853 STARD3NLO95772 234 aa22.72■■□□□ 1.23
LSG1-208ENST00000480853 A1BGP04217 495 aa22.72■■□□□ 1.23
LSG1-208ENST00000480853 SERPINB2P05120 415 aa22.72■■□□□ 1.23
LSG1-208ENST00000480853 DCTN1Q14203 1278 aa22.71■■□□□ 1.23
LSG1-208ENST00000480853 DALRD3Q5D0E6 543 aaKnown RBP22.71■■□□□ 1.23
LSG1-208ENST00000480853 MCM10Q7L590 875 aa22.71■■□□□ 1.23
LSG1-208ENST00000480853 TBC1D2BQ9UPU7 963 aa22.71■■□□□ 1.23
LSG1-208ENST00000480853 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
LSG1-208ENST00000480853 CEMIPQ8WUJ3 1361 aa22.71■■□□□ 1.23
LSG1-208ENST00000480853 PRAMEF22A3QJZ6 481 aa22.7■■□□□ 1.22
LSG1-208ENST00000480853 BTBD11A6QL63 1104 aa22.7■■□□□ 1.22
LSG1-208ENST00000480853 KIF3CO14782 793 aa22.7■■□□□ 1.22
LSG1-208ENST00000480853 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
LSG1-208ENST00000480853 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
LSG1-208ENST00000480853 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
LSG1-208ENST00000480853 C9orf131Q5VYM1 1079 aa22.68■■□□□ 1.22
LSG1-208ENST00000480853 TBC1D9BQ66K14 1250 aa22.68■■□□□ 1.22
LSG1-208ENST00000480853 CCDC24Q8N4L8 307 aa22.68■■□□□ 1.22
LSG1-208ENST00000480853 FMNL2Q96PY5 1086 aa22.68■■□□□ 1.22
LSG1-208ENST00000480853 ARFGEF1Q9Y6D6 1849 aa22.68■■□□□ 1.22
LSG1-208ENST00000480853 TEX13AQ9BXU3 409 aaPredicted RBP22.67■■□□□ 1.22
LSG1-208ENST00000480853 CEP350Q5VT06 3117 aa22.67■■□□□ 1.22
LSG1-208ENST00000480853 CARMIL3Q8ND23 1372 aa22.65■■□□□ 1.22
LSG1-208ENST00000480853 NMRK2Q9NPI5 230 aa22.65■■□□□ 1.22
LSG1-208ENST00000480853 A0A087WZG4 1122 aa22.64■■□□□ 1.21
LSG1-208ENST00000480853 MIS18AQ9NYP9 233 aa22.64■■□□□ 1.21
LSG1-208ENST00000480853 NRXN2Q9P2S2 1712 aa22.64■■□□□ 1.21
LSG1-208ENST00000480853 IL6STP40189 918 aaPredicted RBP22.63■■□□□ 1.21
LSG1-208ENST00000480853 C2CD5Q86YS7 1000 aa22.63■■□□□ 1.21
LSG1-208ENST00000480853 RASSF7Q02833 373 aa22.62■■□□□ 1.21
LSG1-208ENST00000480853 RTF1Q92541 710 aaKnown RBP22.62■■□□□ 1.21
LSG1-208ENST00000480853 SBF1O95248 1867 aa22.62■■□□□ 1.21
LSG1-208ENST00000480853 CAMTA2O94983 1202 aa22.61■■□□□ 1.21
LSG1-208ENST00000480853 PRELPP51888 382 aa22.61■■□□□ 1.21
LSG1-208ENST00000480853 RNF181Q9P0P0 153 aa22.61■■□□□ 1.21
LSG1-208ENST00000480853 HSPA6P17066 643 aa22.59■■□□□ 1.21
LSG1-208ENST00000480853 NBPF26B4DH59 902 aa22.58■■□□□ 1.21
LSG1-208ENST00000480853 H0YIN7 160 aa22.58■■□□□ 1.21
LSG1-208ENST00000480853 PRR5LQ6MZQ0 368 aa22.58■■□□□ 1.21
LSG1-208ENST00000480853 NBPF10Q6P3W6 841 aaKnown RBP22.58■■□□□ 1.21
LSG1-208ENST00000480853 DZIP3Q86Y13 1208 aaKnown RBP22.58■■□□□ 1.21
LSG1-208ENST00000480853 NBPF15Q8N660 670 aa22.58■■□□□ 1.21
LSG1-208ENST00000480853 TTLL6Q8N841 843 aa22.58■■□□□ 1.21
LSG1-208ENST00000480853 ANKRD31Q8N7Z5 1873 aa22.58■■□□□ 1.2
LSG1-208ENST00000480853 SNRPA1P09661 255 aaKnown RBP22.57■■□□□ 1.2
LSG1-208ENST00000480853 TAF7Q15545 349 aaPredicted RBP22.57■■□□□ 1.2
LSG1-208ENST00000480853 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
LSG1-208ENST00000480853 ZNF219Q9P2Y4 722 aaPredicted RBP22.57■■□□□ 1.2
LSG1-208ENST00000480853 HTATSF1O43719 755 aaKnown RBP22.56■■□□□ 1.2
LSG1-208ENST00000480853 ZNF622Q969S3 477 aaKnown RBP eCLIP22.56■■□□□ 1.2
LSG1-208ENST00000480853 THUMPD2Q9BTF0 503 aaKnown RBP22.56■■□□□ 1.2
LSG1-208ENST00000480853 DLG5Q8TDM6 1919 aa22.55■■□□□ 1.2
LSG1-208ENST00000480853 SETDB2Q96T68 719 aa22.55■■□□□ 1.2
LSG1-208ENST00000480853 CCDC88AQ3V6T2 1871 aa22.54■■□□□ 1.2
LSG1-208ENST00000480853 NPM2Q86SE8 214 aaKnown RBP22.54■■□□□ 1.2
LSG1-208ENST00000480853 BRIP1Q9BX63 1249 aa22.54■■□□□ 1.2
LSG1-208ENST00000480853 RRAGCQ9HB90 399 aa22.54■■□□□ 1.2
LSG1-208ENST00000480853 SCN7AQ01118 1682 aa22.53■■□□□ 1.2
LSG1-208ENST00000480853 TOMM70O94826 608 aa22.53■■□□□ 1.2
LSG1-208ENST00000480853 DLEC1Q9Y238 1755 aa22.53■■□□□ 1.2
LSG1-208ENST00000480853 NFKBIEO00221 500 aa22.51■■□□□ 1.19
LSG1-208ENST00000480853 C21orf2O43822 256 aa22.51■■□□□ 1.19
LSG1-208ENST00000480853 PDE6BP35913 854 aa22.5■■□□□ 1.19
LSG1-208ENST00000480853 HLFQ16534 295 aa22.5■■□□□ 1.19
LSG1-208ENST00000480853 NGEFQ8N5V2 710 aa22.5■■□□□ 1.19
LSG1-208ENST00000480853 LMNB1P20700 586 aa22.49■■□□□ 1.19
LSG1-208ENST00000480853 NFE2L2Q16236 605 aa22.49■■□□□ 1.19
LSG1-208ENST00000480853 CNBD1Q8NA66 436 aa22.49■■□□□ 1.19
LSG1-208ENST00000480853 FAM177BA6PVY3 158 aa22.48■■□□□ 1.19
LSG1-208ENST00000480853 DDX10Q13206 875 aaKnown RBP22.48■■□□□ 1.19
LSG1-208ENST00000480853 COL11A2P13942 1736 aaPredicted RBP22.48■■□□□ 1.19
LSG1-208ENST00000480853 BCORQ6W2J9 1755 aa22.48■■□□□ 1.19
LSG1-208ENST00000480853 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
LSG1-208ENST00000480853 NPHP1O15259 732 aa22.47■■□□□ 1.19
LSG1-208ENST00000480853 EIF4A1P60842 406 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms