RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 ERBB4Q15303 1308 aa9.35□□□□□ -0.91
CKAP2-206ENST00000480747 GMPRP36959 345 aa9.35□□□□□ -0.91
CKAP2-206ENST00000480747 CTSOP43234 321 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-206ENST00000480747 ARHGAP4P98171 946 aa9.35□□□□□ -0.91
CKAP2-206ENST00000480747 POLMQ9NP87 494 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-206ENST00000480747 FIGNL2A6NMB9 653 aa9.34□□□□□ -0.91
CKAP2-206ENST00000480747 C21orf2O43822 256 aa9.34□□□□□ -0.91
CKAP2-206ENST00000480747 VSIG8P0DPA2 414 aa9.34□□□□□ -0.91
CKAP2-206ENST00000480747 MAPK1P28482 360 aa9.34□□□□□ -0.91
CKAP2-206ENST00000480747 PTGIRP43119 386 aa9.34□□□□□ -0.91
CKAP2-206ENST00000480747 PSME1Q06323 249 aa9.34□□□□□ -0.91
CKAP2-206ENST00000480747 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-206ENST00000480747 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
CKAP2-206ENST00000480747 ZNF395Q9H8N7 513 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-206ENST00000480747 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
CKAP2-206ENST00000480747 WEE1P30291 646 aa9.33□□□□□ -0.92
CKAP2-206ENST00000480747 KDF1Q8NAX2 398 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-206ENST00000480747 HINFPQ9BQA5 517 aa9.33□□□□□ -0.92
CKAP2-206ENST00000480747 RECKO95980 971 aa9.32□□□□□ -0.92
CKAP2-206ENST00000480747 ERVK-9P63128 1117 aa9.32□□□□□ -0.92
CKAP2-206ENST00000480747 PTSQ03393 145 aa9.32□□□□□ -0.92
CKAP2-206ENST00000480747 RNF217Q8TC41 542 aa9.32□□□□□ -0.92
CKAP2-206ENST00000480747 ASB16Q96NS5 453 aa9.32□□□□□ -0.92
CKAP2-206ENST00000480747 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
CKAP2-206ENST00000480747 VAMP1P23763 118 aa9.31□□□□□ -0.92
CKAP2-206ENST00000480747 ZNF326Q5BKZ1 582 aaKnown RBP9.31□□□□□ -0.92
CKAP2-206ENST00000480747 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
CKAP2-206ENST00000480747 DCTN4Q9UJW0 460 aa9.31□□□□□ -0.92
CKAP2-206ENST00000480747 PCDHB11Q9Y5F2 797 aa9.31□□□□□ -0.92
CKAP2-206ENST00000480747 FKBP4Q02790 459 aaKnown RBP eCLIP9.29□□□□□ -0.92
CKAP2-206ENST00000480747 SCTRP47872 440 aa9.28□□□□□ -0.92
CKAP2-206ENST00000480747 USP4Q13107 963 aa9.28□□□□□ -0.92
CKAP2-206ENST00000480747 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
CKAP2-206ENST00000480747 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
CKAP2-206ENST00000480747 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
CKAP2-206ENST00000480747 STK17AQ9UEE5 414 aa9.28□□□□□ -0.92
CKAP2-206ENST00000480747 SLC35F4A4IF30 521 aa9.27□□□□□ -0.93
CKAP2-206ENST00000480747 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
CKAP2-206ENST00000480747 M0R2N6 131 aa9.26□□□□□ -0.93
CKAP2-206ENST00000480747 RNF144AP50876 292 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-206ENST00000480747 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
CKAP2-206ENST00000480747 ZNF358Q9NW07 568 aa9.26□□□□□ -0.93
CKAP2-206ENST00000480747 STAU1O95793 577 aaKnown RBP9.25□□□□□ -0.93
CKAP2-206ENST00000480747 LYSMD3Q7Z3D4 306 aa9.25□□□□□ -0.93
CKAP2-206ENST00000480747 RGL4Q8IZJ4 473 aa9.25□□□□□ -0.93
CKAP2-206ENST00000480747 OSBPL3Q9H4L5 887 aa9.25□□□□□ -0.93
CKAP2-206ENST00000480747 ESF1Q9H501 851 aaKnown RBP9.25□□□□□ -0.93
CKAP2-206ENST00000480747 A0A1W2PRU2 124 aa9.24□□□□□ -0.93
CKAP2-206ENST00000480747 TMEM229AB2RXF0 380 aa9.24□□□□□ -0.93
CKAP2-206ENST00000480747 MEN1O00255 615 aa9.24□□□□□ -0.93
CKAP2-206ENST00000480747 P4HBP07237 508 aaKnown RBP9.24□□□□□ -0.93
CKAP2-206ENST00000480747 GPC1P35052 558 aa9.24□□□□□ -0.93
CKAP2-206ENST00000480747 HELQQ8TDG4 1101 aa9.24□□□□□ -0.93
CKAP2-206ENST00000480747 C8orf37Q96NL8 207 aa9.24□□□□□ -0.93
CKAP2-206ENST00000480747 SENP3-EIF4A1A0A087X0R7 540 aa9.23□□□□□ -0.93
CKAP2-206ENST00000480747 PTCD1O75127 700 aaKnown RBP9.23□□□□□ -0.93
CKAP2-206ENST00000480747 MYCP01106 439 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-206ENST00000480747 ITGA6P23229 1130 aa9.23□□□□□ -0.93
CKAP2-206ENST00000480747 CLN3Q13286 438 aa9.23□□□□□ -0.93
CKAP2-206ENST00000480747 ZSCAN29Q8IWY8 852 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-206ENST00000480747 ZSCAN1Q8NBB4 408 aa9.23□□□□□ -0.93
CKAP2-206ENST00000480747 NANOS1Q8WY41 292 aaKnown RBP9.23□□□□□ -0.93
CKAP2-206ENST00000480747 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
CKAP2-206ENST00000480747 TSNAXIP1Q2TAA8 658 aa9.22□□□□□ -0.93
CKAP2-206ENST00000480747 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-206ENST00000480747 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
CKAP2-206ENST00000480747 NLRP3Q96P20 1036 aa9.22□□□□□ -0.93
CKAP2-206ENST00000480747 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
CKAP2-206ENST00000480747 NPR3P17342 541 aa9.21□□□□□ -0.94
CKAP2-206ENST00000480747 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
CKAP2-206ENST00000480747 SCNN1DP51172 638 aa9.21□□□□□ -0.94
CKAP2-206ENST00000480747 PRICKLE2Q7Z3G6 844 aa9.21□□□□□ -0.94
CKAP2-206ENST00000480747 TMC7Q7Z402 723 aa9.21□□□□□ -0.94
CKAP2-206ENST00000480747 GNRH1P01148 92 aa9.2□□□□□ -0.94
CKAP2-206ENST00000480747 IGFBP4P22692 258 aa9.2□□□□□ -0.94
CKAP2-206ENST00000480747 MPSTP25325 297 aa9.2□□□□□ -0.94
CKAP2-206ENST00000480747 MRPL58Q14197 206 aaKnown RBP9.2□□□□□ -0.94
CKAP2-206ENST00000480747 LDLRAD1Q5T700 205 aa9.2□□□□□ -0.94
CKAP2-206ENST00000480747 TNS4Q8IZW8 715 aa9.2□□□□□ -0.94
CKAP2-206ENST00000480747 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
CKAP2-206ENST00000480747 BACH2Q9BYV9 841 aa9.2□□□□□ -0.94
CKAP2-206ENST00000480747 SAP130Q9H0E3 1048 aa9.2□□□□□ -0.94
CKAP2-206ENST00000480747 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
CKAP2-206ENST00000480747 SLC27A3Q5K4L6 730 aa9.19□□□□□ -0.94
CKAP2-206ENST00000480747 GPR161Q8N6U8 529 aaKnown RBP9.19□□□□□ -0.94
CKAP2-206ENST00000480747 SREK1Q8WXA9 508 aaKnown RBP9.19□□□□□ -0.94
CKAP2-206ENST00000480747 RBCK1Q9BYM8 510 aa9.19□□□□□ -0.94
CKAP2-206ENST00000480747 CDC14CA4D256 554 aa9.18□□□□□ -0.94
CKAP2-206ENST00000480747 FOXO3O43524 673 aa9.18□□□□□ -0.94
CKAP2-206ENST00000480747 RHOQP17081 205 aa9.18□□□□□ -0.94
CKAP2-206ENST00000480747 EPHA4P54764 986 aa9.18□□□□□ -0.94
CKAP2-206ENST00000480747 ZC3H6P61129 1189 aaKnown RBP9.18□□□□□ -0.94
CKAP2-206ENST00000480747 RAB6BQ9NRW1 208 aa9.18□□□□□ -0.94
CKAP2-206ENST00000480747 TREHO43280 583 aa9.17□□□□□ -0.94
CKAP2-206ENST00000480747 FAM13AO94988 1023 aa9.17□□□□□ -0.94
CKAP2-206ENST00000480747 FMR1Q06787 632 aaKnown RBP eCLIP9.17□□□□□ -0.94
CKAP2-206ENST00000480747 SV2AQ7L0J3 742 aa9.17□□□□□ -0.94
CKAP2-206ENST00000480747 FAM177A1Q8N128 213 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-206ENST00000480747 VWA5B2Q8N398 1253 aa9.17□□□□□ -0.94
CKAP2-206ENST00000480747 DRC1Q96MC2 740 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms