RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CEP112Q8N8E3 955 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 HMGXB3Q12766 1538 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 PIK3C2GO75747 1445 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 TOP2BQ02880 1626 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 KRT18P05783 430 aaKnown RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 ZSCAN22P10073 491 aaPredicted RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 OGFRQ9NZT2 677 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 LRRFIP2Q9Y608 721 aaKnown RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 ZNF445P59923 1031 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 AMPD3Q01432 767 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 TBC1D9Q6ZT07 1266 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 RBM33Q96EV2 1170 aaKnown RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 CASTP20810 708 aaKnown RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC91Q7Z6B0 441 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 PRAM1Q96QH2 718 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 CABP1Q9NZU7 370 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 OPA1O60313 960 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC172P0C7W6 258 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 TAF7Q15545 349 aaPredicted RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 HSP90AB3PQ58FF7 597 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC12Q8WUD4 166 aaPredicted RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 ATP2B1P20020 1258 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 DYDC1Q8WWB3 177 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 RMND1Q9NWS8 449 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 BABAM1Q9NWV8 329 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 NSD3Q9BZ95 1437 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 NBPF7P0C2Y1 421 aaPredicted RBP7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 NEFHP12036 1026 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 PIP4K2BP78356 416 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CETN1Q12798 172 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 ERO1AQ96HE7 468 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.11□□□□□ -1.274e-8■■□□□ 14.5
PRPF4B-205ENST00000480058 PRPHP41219 470 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 TMEM132EQ6IEE7 984 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 DCTPP1Q9H773 170 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CTAGE15A4D2H0 777 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CTAGE8P0CG41 777 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CYLC1P35663 651 aaPredicted RBP7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC178Q5BJE1 867 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CTAGE6Q86UF2 777 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CTAGE4Q8IX94 777 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CTCFLQ8NI51 663 aaPredicted RBP7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 IFT140Q96RY7 1462 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 CAMSAP2Q08AD1 1489 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 FAM135AQ9P2D6 1515 aa7.11□□□□□ -1.27
PRPF4B-205ENST00000480058 EVA1CP58658 441 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 PPP4R3BQ5MIZ7 849 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 DNAI2Q9GZS0 605 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 HYPKQ9NX55 129 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 TTC41PQ6P2S7 1318 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 EBAG9O00559 213 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 EPRSP07814 1512 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 SKILP12757 684 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 CEP135Q66GS9 1140 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 KIF6Q6ZMV9 814 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 FSIP1Q8NA03 581 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 TMX3Q96JJ7 454 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 STMN4Q9H169 189 aaPredicted RBP7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 ABCA10Q8WWZ4 1543 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 GNAT3A8MTJ3 354 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 CASQ1P31415 396 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 ZSCAN23Q3MJ62 389 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 FERMT3Q86UX7 667 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 MRPS27Q92552 414 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 TTC14Q96N46 770 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 TSG101Q99816 390 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 CDK19Q9BWU1 502 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 BRPF1P55201 1214 aaPredicted RBP7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 IQCA1Q86XH1 822 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 EXOC6BQ9Y2D4 811 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 HECW1Q76N89 1606 aa7.1□□□□□ -1.27
PRPF4B-205ENST00000480058 GNG11P61952 73 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 CWC27Q6UX04 472 aaKnown RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 RAD54L2Q9Y4B4 1467 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 NF2P35240 595 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 KRT83P78385 493 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 NUTM2DQ5VT03 806 aaPredicted RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 PRPF40BQ6NWY9 871 aaKnown RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 C16orf45Q96MC5 204 aaPredicted RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 TEX13AQ9BXU3 409 aaPredicted RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 TTF1Q15361 905 aaPredicted RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 C8orf34Q49A92 452 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 CNNM3Q8NE01 707 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 IQCDQ96DY2 449 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 AOX1Q06278 1338 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 SPECC1Q5M775 1068 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 PIK3R4Q99570 1358 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 IFIT1P09914 478 aaKnown RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 HCLS1P14317 486 aaPredicted RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 HSPA4P34932 840 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 GNAQP50148 359 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 SH3BGRP55822 239 aaPredicted RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 ZFYVE27Q5T4F4 411 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 STXBP4Q6ZWJ1 553 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 RPGRIP1Q96KN7 1286 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC77Q9BR77 488 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 C14orf93Q9H972 538 aaKnown RBP7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 ABCC5O15440 1437 aa7.09□□□□□ -1.27
PRPF4B-205ENST00000480058 FLIIQ13045 1269 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms