RNA–Protein interactions for RNA: ENST00000479901.5

AGAP3-216, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 5 BASIC

Gene AGAP3, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-216	ENST00000479901	USP44	Q9H0E7	712 aa		32.85	■■■□□ 2.85
AGAP3-216	ENST00000479901	CASC1	Q6TDU7	716 aa		32.84	■■■□□ 2.85
AGAP3-216	ENST00000479901	PHAX	Q9H814	394 aa	Known RBP	32.84	■■■□□ 2.85
AGAP3-216	ENST00000479901	AXIN2	Q9Y2T1	843 aa		32.84	■■■□□ 2.85
AGAP3-216	ENST00000479901	SDS	P20132	328 aa		32.84	■■■□□ 2.85
AGAP3-216	ENST00000479901	MPRIP	Q6WCQ1	1025 aa		32.84	■■■□□ 2.85
AGAP3-216	ENST00000479901	COL14A1	Q05707	1796 aa	Known RBP	32.83	■■■□□ 2.85
AGAP3-216	ENST00000479901	ABCC6	O95255	1503 aa		32.83	■■■□□ 2.85
AGAP3-216	ENST00000479901	UNC5CL	Q8IV45	518 aa		32.83	■■■□□ 2.85
AGAP3-216	ENST00000479901	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.83	■■■□□ 2.85
AGAP3-216	ENST00000479901	APBB1	O00213	710 aa		32.82	■■■□□ 2.85
AGAP3-216	ENST00000479901	UBTFL1	P0CB47	393 aa	Predicted RBP	32.82	■■■□□ 2.85
AGAP3-216	ENST00000479901	HEG1	Q9ULI3	1381 aa		32.82	■■■□□ 2.84
AGAP3-216	ENST00000479901	LRRCC1	Q9C099	1032 aa		32.82	■■■□□ 2.84
AGAP3-216	ENST00000479901	SRCIN1	Q9C0H9	1055 aa		32.82	■■■□□ 2.84
AGAP3-216	ENST00000479901	ERBB3	P21860	1342 aa		32.82	■■■□□ 2.84
AGAP3-216	ENST00000479901	EIF2S2	P20042	333 aa	Known RBP	32.81	■■■□□ 2.84
AGAP3-216	ENST00000479901	PDE1A	P54750	535 aa		32.81	■■■□□ 2.84
AGAP3-216	ENST00000479901	LRRFIP2	Q9Y608	721 aa	Known RBP	32.81	■■■□□ 2.84
AGAP3-216	ENST00000479901	SALL3	Q9BXA9	1300 aa		32.81	■■■□□ 2.84
AGAP3-216	ENST00000479901	KCNQ3	O43525	872 aa		32.8	■■■□□ 2.84
AGAP3-216	ENST00000479901	PLEKHG2	Q9H7P9	1386 aa		32.8	■■■□□ 2.84
AGAP3-216	ENST00000479901	PNMA6E	A0A0J9YXQ4	647 aa		32.8	■■■□□ 2.84
AGAP3-216	ENST00000479901	CHPF2	Q9P2E5	772 aa		32.8	■■■□□ 2.84
AGAP3-216	ENST00000479901	EXOC6B	Q9Y2D4	811 aa		32.78	■■■□□ 2.84
AGAP3-216	ENST00000479901	TUBGCP6	Q96RT7	1819 aa		32.78	■■■□□ 2.84
AGAP3-216	ENST00000479901	DDIT3	P35638	169 aa		32.78	■■■□□ 2.84
AGAP3-216	ENST00000479901	SSH3	Q8TE77	659 aa		32.78	■■■□□ 2.84
AGAP3-216	ENST00000479901	ATRN	O75882	1429 aa		32.78	■■■□□ 2.84
AGAP3-216	ENST00000479901	COL18A1	P39060	1754 aa		32.77	■■■□□ 2.84
AGAP3-216	ENST00000479901	NRAP	Q86VF7	1730 aa		32.77	■■■□□ 2.84
AGAP3-216	ENST00000479901	NWD2	Q9ULI1	1742 aa		32.77	■■■□□ 2.84
AGAP3-216	ENST00000479901	DNAAF4	Q8WXU2	420 aa		32.77	■■■□□ 2.84
AGAP3-216	ENST00000479901	USP26	Q9BXU7	913 aa		32.77	■■■□□ 2.84
AGAP3-216	ENST00000479901	DBF4	Q9UBU7	674 aa	Predicted RBP	32.77	■■■□□ 2.84
AGAP3-216	ENST00000479901	TRPC5	Q9UL62	973 aa	Predicted RBP	32.77	■■■□□ 2.84
AGAP3-216	ENST00000479901	SPRYD3	Q8NCJ5	442 aa		32.76	■■■□□ 2.83
AGAP3-216	ENST00000479901	STRN4	Q9NRL3	753 aa		32.76	■■■□□ 2.83
AGAP3-216	ENST00000479901	CIZ1	Q9ULV3	898 aa	Predicted RBP	32.76	■■■□□ 2.83
AGAP3-216	ENST00000479901	BEND3	Q5T5X7	828 aa		32.75	■■■□□ 2.83
AGAP3-216	ENST00000479901	GIGYF1	O75420	1035 aa	Predicted RBP	32.74	■■■□□ 2.83
AGAP3-216	ENST00000479901	HSP90AB1	P08238	724 aa	Known RBP	32.74	■■■□□ 2.83
AGAP3-216	ENST00000479901	POLA2	Q14181	598 aa		32.74	■■■□□ 2.83
AGAP3-216	ENST00000479901	RABEP1	Q15276	862 aa		32.74	■■■□□ 2.83
AGAP3-216	ENST00000479901	STAP2	Q9UGK3	403 aa		32.74	■■■□□ 2.83
AGAP3-216	ENST00000479901	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.73	■■■□□ 2.83
AGAP3-216	ENST00000479901	AOX1	Q06278	1338 aa		32.73	■■■□□ 2.83
AGAP3-216	ENST00000479901	RAB11FIP3	O75154	756 aa		32.73	■■■□□ 2.83
AGAP3-216	ENST00000479901	REC8	O95072	547 aa		32.72	■■■□□ 2.83
AGAP3-216	ENST00000479901	RXRB	P28702	533 aa		32.71	■■■□□ 2.83
AGAP3-216	ENST00000479901	ADCY9	O60503	1353 aa		32.71	■■■□□ 2.83
AGAP3-216	ENST00000479901	SCN11A	Q9UI33	1791 aa		32.71	■■■□□ 2.83
AGAP3-216	ENST00000479901		K7ELQ4	463 aa	Predicted RBP	32.71	■■■□□ 2.83
AGAP3-216	ENST00000479901	BCL11A	Q9H165	835 aa		32.71	■■■□□ 2.83
AGAP3-216	ENST00000479901	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
AGAP3-216	ENST00000479901	PI4KAP2	A4QPH2	592 aa		32.7	■■■□□ 2.83
AGAP3-216	ENST00000479901	MX1	P20591	662 aa		32.7	■■■□□ 2.83
AGAP3-216	ENST00000479901	VPS72	Q15906	364 aa		32.7	■■■□□ 2.83
AGAP3-216	ENST00000479901	PI4KAP1	Q8N8J0	262 aa		32.7	■■■□□ 2.83
AGAP3-216	ENST00000479901	RAPGEF4	Q8WZA2	1011 aa		32.7	■■■□□ 2.83
AGAP3-216	ENST00000479901	GJD4	Q96KN9	370 aa	Predicted RBP	32.7	■■■□□ 2.83
AGAP3-216	ENST00000479901	CCDC9	Q9Y3X0	531 aa	Known RBP	32.69	■■■□□ 2.82
AGAP3-216	ENST00000479901	ERC2	O15083	957 aa		32.69	■■■□□ 2.82
AGAP3-216	ENST00000479901	RBM6	P78332	1123 aa	Known RBP	32.69	■■■□□ 2.82
AGAP3-216	ENST00000479901	LARP1	Q6PKG0	1096 aa	Known RBP	32.69	■■■□□ 2.82
AGAP3-216	ENST00000479901	COL5A2	P05997	1499 aa	Predicted RBP	32.68	■■■□□ 2.82
AGAP3-216	ENST00000479901	GLI3	P10071	1580 aa		32.68	■■■□□ 2.82
AGAP3-216	ENST00000479901	ALDH1L1	O75891	902 aa		32.67	■■■□□ 2.82
AGAP3-216	ENST00000479901	TAT	P17735	454 aa	Predicted RBP	32.67	■■■□□ 2.82
AGAP3-216	ENST00000479901	MCM4	P33991	863 aa		32.67	■■■□□ 2.82
AGAP3-216	ENST00000479901	EVA1C	P58658	441 aa		32.67	■■■□□ 2.82
AGAP3-216	ENST00000479901	PPP1R42	Q7Z4L9	355 aa		32.66	■■■□□ 2.82
AGAP3-216	ENST00000479901	HYPK	Q9NX55	129 aa		32.66	■■■□□ 2.82
AGAP3-216	ENST00000479901	SPG7	Q9UQ90	795 aa		32.66	■■■□□ 2.82
AGAP3-216	ENST00000479901	NLRP2	Q9NX02	1062 aa		32.65	■■■□□ 2.82
AGAP3-216	ENST00000479901	HDAC5	Q9UQL6	1122 aa		32.65	■■■□□ 2.82
AGAP3-216	ENST00000479901	CD2BP2	O95400	341 aa	Known RBP	32.64	■■■□□ 2.82
AGAP3-216	ENST00000479901	KSR2	Q6VAB6	950 aa		32.64	■■■□□ 2.82
AGAP3-216	ENST00000479901	RBM42	Q9BTD8	480 aa	Known RBP	32.64	■■■□□ 2.82
AGAP3-216	ENST00000479901	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.62	■■■□□ 2.81
AGAP3-216	ENST00000479901	HSP90AB4P	Q58FF6	505 aa		32.62	■■■□□ 2.81
AGAP3-216	ENST00000479901	SPATA31A5	Q5VU36	1347 aa		32.62	■■■□□ 2.81
AGAP3-216	ENST00000479901	SPATA31A7	Q8IWB4	1347 aa		32.62	■■■□□ 2.81
AGAP3-216	ENST00000479901	KDM6A	O15550	1401 aa	Predicted RBP	32.62	■■■□□ 2.81
AGAP3-216	ENST00000479901	MTX1	Q13505	466 aa		32.61	■■■□□ 2.81
AGAP3-216	ENST00000479901	EP400	Q96L91	3159 aa		32.61	■■■□□ 2.81
AGAP3-216	ENST00000479901	ANXA1	P04083	346 aa		32.61	■■■□□ 2.81
AGAP3-216	ENST00000479901	PHKG2	P15735	406 aa		32.61	■■■□□ 2.81
AGAP3-216	ENST00000479901	SLC52A2	Q9HAB3	445 aa		32.61	■■■□□ 2.81
AGAP3-216	ENST00000479901	PKD1L3	Q7Z443	1732 aa		32.6	■■■□□ 2.81
AGAP3-216	ENST00000479901	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.6	■■■□□ 2.81
AGAP3-216	ENST00000479901	MEGF6	O75095	1541 aa		32.59	■■■□□ 2.81
AGAP3-216	ENST00000479901	MRC1	P22897	1456 aa		32.59	■■■□□ 2.81
AGAP3-216	ENST00000479901	SRGAP3	O43295	1099 aa		32.59	■■■□□ 2.81
AGAP3-216	ENST00000479901	SURF6	O75683	361 aa	Known RBP	32.59	■■■□□ 2.81
AGAP3-216	ENST00000479901	KIF1BP	Q96EK5	621 aa		32.59	■■■□□ 2.81
AGAP3-216	ENST00000479901	MAP3K2	Q9Y2U5	619 aa		32.59	■■■□□ 2.81
AGAP3-216	ENST00000479901	SPATA31A1	Q5TZJ5	1347 aa		32.59	■■■□□ 2.81
AGAP3-216	ENST00000479901	IFNL2	Q8IZJ0	200 aa		32.58	■■■□□ 2.81
AGAP3-216	ENST00000479901	DDX58	O95786	925 aa	Known RBP	32.57	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms