RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 SKOR2Q2VWA4 1001 aaPredicted RBP21.19■□□□□ 0.98
TNXB-204ENST00000479795 IL25Q9H293 177 aa21.19■□□□□ 0.98
TNXB-204ENST00000479795 DDX49Q9Y6V7 483 aaKnown RBP21.19■□□□□ 0.98
TNXB-204ENST00000479795 DNAAF4Q8WXU2 420 aa21.19■□□□□ 0.98
TNXB-204ENST00000479795 CHD2O14647 1828 aaKnown RBP21.19■□□□□ 0.98
TNXB-204ENST00000479795 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
TNXB-204ENST00000479795 CACNA1FO60840 1977 aa21.17■□□□□ 0.98
TNXB-204ENST00000479795 NUCB2P80303 420 aa21.17■□□□□ 0.98
TNXB-204ENST00000479795 AKAP4Q5JQC9 854 aa21.17■□□□□ 0.98
TNXB-204ENST00000479795 STAP2Q9UGK3 403 aa21.17■□□□□ 0.98
TNXB-204ENST00000479795 PLEKHO1Q53GL0 409 aaPredicted RBP21.17■□□□□ 0.98
TNXB-204ENST00000479795 BEND3Q5T5X7 828 aa21.17■□□□□ 0.98
TNXB-204ENST00000479795 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
TNXB-204ENST00000479795 NCLP19338 710 aaKnown RBP21.16■□□□□ 0.98
TNXB-204ENST00000479795 RHPN1Q8TCX5 695 aa21.16■□□□□ 0.98
TNXB-204ENST00000479795 PDCL3Q9H2J4 239 aa21.16■□□□□ 0.98
TNXB-204ENST00000479795 PROSER3Q2NL68 480 aa21.15■□□□□ 0.98
TNXB-204ENST00000479795 C1orf141Q5JVX7 400 aa21.15■□□□□ 0.98
TNXB-204ENST00000479795 UPF3BQ9BZI7 483 aaKnown RBP21.15■□□□□ 0.98
TNXB-204ENST00000479795 AXIN2Q9Y2T1 843 aa21.15■□□□□ 0.98
TNXB-204ENST00000479795 ADGRL3Q9HAR2 1447 aa21.15■□□□□ 0.98
TNXB-204ENST00000479795 CYP2E1P05181 493 aaPredicted RBP21.15■□□□□ 0.98
TNXB-204ENST00000479795 ANKRD24Q8TF21 1146 aa21.15■□□□□ 0.98
TNXB-204ENST00000479795 TMX3Q96JJ7 454 aa21.15■□□□□ 0.98
TNXB-204ENST00000479795 PXDNLA1KZ92 1463 aa21.14■□□□□ 0.98
TNXB-204ENST00000479795 ARHGEF25Q86VW2 580 aa21.14■□□□□ 0.98
TNXB-204ENST00000479795 ZDHHC9Q9Y397 364 aa21.14■□□□□ 0.98
TNXB-204ENST00000479795 RNMTO43148 476 aaKnown RBP21.14■□□□□ 0.97
TNXB-204ENST00000479795 POLA2Q14181 598 aa21.14■□□□□ 0.97
TNXB-204ENST00000479795 CLEC17AQ6ZS10 378 aa21.14■□□□□ 0.97
TNXB-204ENST00000479795 PXDNQ92626 1479 aa21.14■□□□□ 0.97
TNXB-204ENST00000479795 CWC22Q9HCG8 908 aaKnown RBP21.13■□□□□ 0.97
TNXB-204ENST00000479795 PTMSP20962 102 aa21.13■□□□□ 0.97
TNXB-204ENST00000479795 MCCP23508 829 aa21.13■□□□□ 0.97
TNXB-204ENST00000479795 ADCY9O60503 1353 aa21.12■□□□□ 0.97
TNXB-204ENST00000479795 ZC3H6P61129 1189 aaKnown RBP21.12■□□□□ 0.97
TNXB-204ENST00000479795 OS9Q13438 667 aaPredicted RBP21.12■□□□□ 0.97
TNXB-204ENST00000479795 MAP3K2Q9Y2U5 619 aa21.12■□□□□ 0.97
TNXB-204ENST00000479795 CWF19L2Q2TBE0 894 aaKnown RBP21.11■□□□□ 0.97
TNXB-204ENST00000479795 RAB11FIP3O75154 756 aa21.11■□□□□ 0.97
TNXB-204ENST00000479795 PRPF40AO75400 957 aaKnown RBP21.11■□□□□ 0.97
TNXB-204ENST00000479795 KLHL40Q2TBA0 621 aa21.11■□□□□ 0.97
TNXB-204ENST00000479795 PI4K2BQ8TCG2 481 aa21.11■□□□□ 0.97
TNXB-204ENST00000479795 TUBGCP6Q96RT7 1819 aa21.1■□□□□ 0.97
TNXB-204ENST00000479795 TPM2P07951 284 aa21.1■□□□□ 0.97
TNXB-204ENST00000479795 HOXB7P09629 217 aa21.1■□□□□ 0.97
TNXB-204ENST00000479795 DDX17Q92841 729 aaKnown RBP21.1■□□□□ 0.97
TNXB-204ENST00000479795 KIF1BPQ96EK5 621 aa21.1■□□□□ 0.97
TNXB-204ENST00000479795 LMBRD1Q9NUN5 540 aa21.1■□□□□ 0.97
TNXB-204ENST00000479795 DBF4Q9UBU7 674 aaPredicted RBP21.1■□□□□ 0.97
TNXB-204ENST00000479795 AMOTQ4VCS5 1084 aa21.1■□□□□ 0.97
TNXB-204ENST00000479795 CAVIN1Q6NZI2 390 aaKnown RBP21.1■□□□□ 0.97
TNXB-204ENST00000479795 MED1Q15648 1581 aaPredicted RBP21.09■□□□□ 0.97
TNXB-204ENST00000479795 GIGYF1O75420 1035 aaPredicted RBP21.09■□□□□ 0.97
TNXB-204ENST00000479795 AIMP1Q12904 312 aaKnown RBP21.09■□□□□ 0.97
TNXB-204ENST00000479795 C9orf78Q9NZ63 289 aaPredicted RBP21.09■□□□□ 0.97
TNXB-204ENST00000479795 PRDM4Q9UKN5 801 aa21.09■□□□□ 0.97
TNXB-204ENST00000479795 PA2G4Q9UQ80 394 aaKnown RBP21.09■□□□□ 0.97
TNXB-204ENST00000479795 KRT28Q7Z3Y7 464 aa21.08■□□□□ 0.97
TNXB-204ENST00000479795 A0A0U1RQG5 324 aaPredicted RBP21.07■□□□□ 0.96
TNXB-204ENST00000479795 KDM3BQ7LBC6 1761 aa21.07■□□□□ 0.96
TNXB-204ENST00000479795 N4BP2Q86UW6 1770 aaPredicted RBP21.07■□□□□ 0.96
TNXB-204ENST00000479795 RBM10P98175 930 aaKnown RBP21.07■□□□□ 0.96
TNXB-204ENST00000479795 SLC39A6Q13433 755 aa21.06■□□□□ 0.96
TNXB-204ENST00000479795 FOXD4L6Q3SYB3 417 aaPredicted RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 FOXD4L3Q6VB84 417 aaPredicted RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 PROSER2Q86WR7 435 aaPredicted RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 TRIM44Q96DX7 344 aaPredicted RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 CWC27Q6UX04 472 aaKnown RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 AOX1Q06278 1338 aa21.06■□□□□ 0.96
TNXB-204ENST00000479795 LARP6Q9BRS8 491 aaKnown RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 RBM27Q9P2N5 1060 aaKnown RBP21.06■□□□□ 0.96
TNXB-204ENST00000479795 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
TNXB-204ENST00000479795 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
TNXB-204ENST00000479795 ANAPC15P60006 121 aa21.05■□□□□ 0.96
TNXB-204ENST00000479795 KIAA1211Q6ZU35 1233 aa21.04■□□□□ 0.96
TNXB-204ENST00000479795 KSR2Q6VAB6 950 aa21.04■□□□□ 0.96
TNXB-204ENST00000479795 GPT2Q8TD30 523 aa21.04■□□□□ 0.96
TNXB-204ENST00000479795 LMO7Q8WWI1 1683 aa21.03■□□□□ 0.96
TNXB-204ENST00000479795 CNTROBQ8N137 903 aa21.03■□□□□ 0.96
TNXB-204ENST00000479795 CHMP4AQ9BY43 222 aa21.03■□□□□ 0.96
TNXB-204ENST00000479795 SGSM2O43147 1006 aa21.03■□□□□ 0.96
TNXB-204ENST00000479795 DTNBO60941 627 aa21.03■□□□□ 0.96
TNXB-204ENST00000479795 HSPA4P34932 840 aa21.03■□□□□ 0.96
TNXB-204ENST00000479795 MCM2P49736 904 aa21.03■□□□□ 0.96
TNXB-204ENST00000479795 ZSCAN23Q3MJ62 389 aa21.02■□□□□ 0.96
TNXB-204ENST00000479795 NLRP2Q9NX02 1062 aa21.02■□□□□ 0.96
TNXB-204ENST00000479795 NSFL1CQ9UNZ2 370 aaKnown RBP21.02■□□□□ 0.96
TNXB-204ENST00000479795 CUL4AQ13619 759 aa21.02■□□□□ 0.96
TNXB-204ENST00000479795 CLASRPQ8N2M8 674 aaKnown RBP21.01■□□□□ 0.95
TNXB-204ENST00000479795 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.01■□□□□ 0.95
TNXB-204ENST00000479795 MYL6BP14649 208 aa21.01■□□□□ 0.95
TNXB-204ENST00000479795 HSP90AB4PQ58FF6 505 aa21.01■□□□□ 0.95
TNXB-204ENST00000479795 RASEFQ8IZ41 740 aa21.01■□□□□ 0.95
TNXB-204ENST00000479795 NASPP49321 788 aaPredicted RBP21■□□□□ 0.95
TNXB-204ENST00000479795 CPA1P15085 419 aa21■□□□□ 0.95
TNXB-204ENST00000479795 SUCLG2Q96I99 432 aa21■□□□□ 0.95
TNXB-204ENST00000479795 PIP4K2AP48426 406 aaPredicted RBP20.99■□□□□ 0.95
TNXB-204ENST00000479795 SNX14Q9Y5W7 946 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms