RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 SRCIN1Q9C0H9 1055 aa18.07■□□□□ 0.48
CLDN18-203ENST00000479660 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
CLDN18-203ENST00000479660 CDCA7Q9BWT1 371 aaPredicted RBP18.06■□□□□ 0.48
CLDN18-203ENST00000479660 C5P01031 1676 aa18.06■□□□□ 0.48
CLDN18-203ENST00000479660 ADCY9O60503 1353 aa18.06■□□□□ 0.48
CLDN18-203ENST00000479660 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
CLDN18-203ENST00000479660 KSR2Q6VAB6 950 aa18.06■□□□□ 0.48
CLDN18-203ENST00000479660 NRAPQ86VF7 1730 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 MYL6BP14649 208 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 AIMP1Q12904 312 aaKnown RBP18.05■□□□□ 0.48
CLDN18-203ENST00000479660 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 USP44Q9H0E7 712 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 MAP3K2Q9Y2U5 619 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 SLIT2O94813 1529 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 DDX58O95786 925 aaKnown RBP18.05■□□□□ 0.48
CLDN18-203ENST00000479660 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 CHD1LQ86WJ1 897 aa18.05■□□□□ 0.48
CLDN18-203ENST00000479660 CCDC9Q9Y3X0 531 aaKnown RBP18.05■□□□□ 0.48
CLDN18-203ENST00000479660 LNPKQ9C0E8 428 aa18.04■□□□□ 0.48
CLDN18-203ENST00000479660 DCTPP1Q9H773 170 aa18.04■□□□□ 0.48
CLDN18-203ENST00000479660 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
CLDN18-203ENST00000479660 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
CLDN18-203ENST00000479660 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
CLDN18-203ENST00000479660 N4BP2Q86UW6 1770 aaPredicted RBP18.03■□□□□ 0.48
CLDN18-203ENST00000479660 HMMRO75330 724 aa18.03■□□□□ 0.48
CLDN18-203ENST00000479660 UBTFL1P0CB47 393 aaPredicted RBP18.03■□□□□ 0.48
CLDN18-203ENST00000479660 C8orf34Q49A92 452 aa18.03■□□□□ 0.48
CLDN18-203ENST00000479660 PIGBQ92521 554 aa18.03■□□□□ 0.48
CLDN18-203ENST00000479660 NGLY1Q96IV0 654 aa18.03■□□□□ 0.48
CLDN18-203ENST00000479660 C8orf37Q96NL8 207 aa18.03■□□□□ 0.48
CLDN18-203ENST00000479660 NWD2Q9ULI1 1742 aa18.02■□□□□ 0.48
CLDN18-203ENST00000479660 TOGARAM1Q9Y4F4 1720 aa18.02■□□□□ 0.48
CLDN18-203ENST00000479660 DDB1Q16531 1140 aa18.02■□□□□ 0.48
CLDN18-203ENST00000479660 UNC5CLQ8IV45 518 aa18.02■□□□□ 0.48
CLDN18-203ENST00000479660 TNS2Q63HR2 1409 aa18.02■□□□□ 0.47
CLDN18-203ENST00000479660 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
CLDN18-203ENST00000479660 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
CLDN18-203ENST00000479660 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
CLDN18-203ENST00000479660 RIC3Q7Z5B4 369 aa18.01■□□□□ 0.47
CLDN18-203ENST00000479660 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
CLDN18-203ENST00000479660 KCPQ6ZWJ8 1503 aa18■□□□□ 0.47
CLDN18-203ENST00000479660 GLI3P10071 1580 aa18■□□□□ 0.47
CLDN18-203ENST00000479660 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
CLDN18-203ENST00000479660 UBR2Q8IWV8 1755 aa18■□□□□ 0.47
CLDN18-203ENST00000479660 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
CLDN18-203ENST00000479660 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
CLDN18-203ENST00000479660 BARGINQ6ZT62 677 aa17.99■□□□□ 0.47
CLDN18-203ENST00000479660 ASAP1Q9ULH1 1129 aa17.99■□□□□ 0.47
CLDN18-203ENST00000479660 KAT6BQ8WYB5 2073 aa17.99■□□□□ 0.47
CLDN18-203ENST00000479660 PAPPAQ13219 1627 aa17.99■□□□□ 0.47
CLDN18-203ENST00000479660 NBPF7P0C2Y1 421 aaPredicted RBP17.99■□□□□ 0.47
CLDN18-203ENST00000479660 ERBB4Q15303 1308 aa17.99■□□□□ 0.47
CLDN18-203ENST00000479660 SPATA31A6Q5VVP1 1343 aa17.99■□□□□ 0.47
CLDN18-203ENST00000479660 ATP8B2P98198 1209 aa17.98■□□□□ 0.47
CLDN18-203ENST00000479660 SYTL4Q96C24 671 aaPredicted RBP17.98■□□□□ 0.47
CLDN18-203ENST00000479660 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
CLDN18-203ENST00000479660 CWF19L2Q2TBE0 894 aaKnown RBP17.98■□□□□ 0.47
CLDN18-203ENST00000479660 ANKRD13DQ6ZTN6 518 aa17.98■□□□□ 0.47
CLDN18-203ENST00000479660 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
CLDN18-203ENST00000479660 LAMB4A4D0S4 1761 aa17.97■□□□□ 0.47
CLDN18-203ENST00000479660 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
CLDN18-203ENST00000479660 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
CLDN18-203ENST00000479660 BCL9O00512 1426 aa17.97■□□□□ 0.47
CLDN18-203ENST00000479660 ITGB4P16144 1822 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 PNMA6EA0A0J9YXQ4 647 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 NBPF26B4DH59 902 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 NEXNQ0ZGT2 675 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 NBPF14Q5TI25 921 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 NBPF10Q6P3W6 841 aaKnown RBP17.96■□□□□ 0.47
CLDN18-203ENST00000479660 FNBP4Q8N3X1 1017 aaPredicted RBP17.96■□□□□ 0.47
CLDN18-203ENST00000479660 NBPF15Q8N660 670 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 LRP6O75581 1613 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 BCL9LQ86UU0 1499 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 A1BGP04217 495 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 PRIM1P49642 420 aaKnown RBP17.96■□□□□ 0.47
CLDN18-203ENST00000479660 VPS72Q15906 364 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
CLDN18-203ENST00000479660 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
CLDN18-203ENST00000479660 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
CLDN18-203ENST00000479660 HSPA1LP34931 641 aa17.94■□□□□ 0.46
CLDN18-203ENST00000479660 MARCH10Q8NA82 808 aaPredicted RBP17.94■□□□□ 0.46
CLDN18-203ENST00000479660 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
CLDN18-203ENST00000479660 APBB1O00213 710 aa17.94■□□□□ 0.46
CLDN18-203ENST00000479660 IGKV5-2P06315 115 aa17.94■□□□□ 0.46
CLDN18-203ENST00000479660 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
CLDN18-203ENST00000479660 MYD88Q99836 296 aa17.93■□□□□ 0.46
CLDN18-203ENST00000479660 USP21Q9UK80 565 aa17.93■□□□□ 0.46
CLDN18-203ENST00000479660 HDAC5Q9UQL6 1122 aa17.93■□□□□ 0.46
CLDN18-203ENST00000479660 GRM8O00222 908 aa17.93■□□□□ 0.46
CLDN18-203ENST00000479660 PPP1R42Q7Z4L9 355 aa17.93■□□□□ 0.46
CLDN18-203ENST00000479660 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
CLDN18-203ENST00000479660 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
CLDN18-203ENST00000479660 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
CLDN18-203ENST00000479660 NEURL1BA8MQ27 555 aa17.92■□□□□ 0.46
CLDN18-203ENST00000479660 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
CLDN18-203ENST00000479660 DNAJC10Q8IXB1 793 aa17.92■□□□□ 0.46
CLDN18-203ENST00000479660 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
CLDN18-203ENST00000479660 EXOC6BQ9Y2D4 811 aa17.92■□□□□ 0.46
CLDN18-203ENST00000479660 A0A0G2JS52 829 aa17.91■□□□□ 0.46
CLDN18-203ENST00000479660 STARD3NLO95772 234 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms