RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
ITSN1-228ENST00000479424 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
ITSN1-228ENST00000479424 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
ITSN1-228ENST00000479424 PIM2Q9P1W9 311 aa11.69□□□□□ -0.54
ITSN1-228ENST00000479424 ANKRD31Q8N7Z5 1873 aa11.69□□□□□ -0.54
ITSN1-228ENST00000479424 COL3A1P02461 1466 aaPredicted RBP11.69□□□□□ -0.54
ITSN1-228ENST00000479424 WDR90Q96KV7 1748 aa11.69□□□□□ -0.54
ITSN1-228ENST00000479424 TOMM70O94826 608 aa11.68□□□□□ -0.54
ITSN1-228ENST00000479424 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
ITSN1-228ENST00000479424 DNAJC5GQ8N7S2 189 aa11.68□□□□□ -0.54
ITSN1-228ENST00000479424 ZBTB1Q9Y2K1 713 aa11.68□□□□□ -0.54
ITSN1-228ENST00000479424 NFIXQ14938 502 aa11.67□□□□□ -0.54
ITSN1-228ENST00000479424 DALRD3Q5D0E6 543 aaKnown RBP11.67□□□□□ -0.54
ITSN1-228ENST00000479424 CCER1Q8TC90 406 aaPredicted RBP11.67□□□□□ -0.54
ITSN1-228ENST00000479424 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
ITSN1-228ENST00000479424 TNRC6CQ9HCJ0 1690 aaKnown RBP11.67□□□□□ -0.54
ITSN1-228ENST00000479424 COL15A1P39059 1388 aa11.67□□□□□ -0.54
ITSN1-228ENST00000479424 PRELPP51888 382 aa11.66□□□□□ -0.54
ITSN1-228ENST00000479424 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
ITSN1-228ENST00000479424 DICER1Q9UPY3 1922 aaKnown RBP11.66□□□□□ -0.54
ITSN1-228ENST00000479424 DIAPH1O60610 1272 aaKnown RBP11.65□□□□□ -0.54
ITSN1-228ENST00000479424 ZPR1O75312 459 aa11.65□□□□□ -0.54
ITSN1-228ENST00000479424 APLP1P51693 650 aa11.65□□□□□ -0.54
ITSN1-228ENST00000479424 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
ITSN1-228ENST00000479424 CARMIL3Q8ND23 1372 aa11.65□□□□□ -0.55
ITSN1-228ENST00000479424 SCN7AQ01118 1682 aa11.65□□□□□ -0.55
ITSN1-228ENST00000479424 CACNA1SQ13698 1873 aa11.64□□□□□ -0.55
ITSN1-228ENST00000479424 FER1L6Q2WGJ9 1857 aa11.64□□□□□ -0.55
ITSN1-228ENST00000479424 COL11A2P13942 1736 aaPredicted RBP11.64□□□□□ -0.55
ITSN1-228ENST00000479424 EIF5P55010 431 aaKnown RBP11.64□□□□□ -0.55
ITSN1-228ENST00000479424 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
ITSN1-228ENST00000479424 RNF181Q9P0P0 153 aa11.64□□□□□ -0.55
ITSN1-228ENST00000479424 TIAM2Q8IVF5 1701 aa11.63□□□□□ -0.55
ITSN1-228ENST00000479424 SERPINB2P05120 415 aa11.63□□□□□ -0.55
ITSN1-228ENST00000479424 RASSF7Q02833 373 aa11.63□□□□□ -0.55
ITSN1-228ENST00000479424 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
ITSN1-228ENST00000479424 NPC1L1Q9UHC9 1359 aa11.63□□□□□ -0.55
ITSN1-228ENST00000479424 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
ITSN1-228ENST00000479424 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
ITSN1-228ENST00000479424 HTRA3P83110 453 aa11.62□□□□□ -0.55
ITSN1-228ENST00000479424 RRAGCQ9HB90 399 aa11.62□□□□□ -0.55
ITSN1-228ENST00000479424 SLX4Q8IY92 1834 aa11.61□□□□□ -0.55
ITSN1-228ENST00000479424 ZNF496Q96IT1 587 aaPredicted RBP11.61□□□□□ -0.55
ITSN1-228ENST00000479424 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
ITSN1-228ENST00000479424 ARFGEF2Q9Y6D5 1785 aa11.6□□□□□ -0.55
ITSN1-228ENST00000479424 CEMIPQ8WUJ3 1361 aa11.6□□□□□ -0.55
ITSN1-228ENST00000479424 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
ITSN1-228ENST00000479424 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
ITSN1-228ENST00000479424 ZNF790Q6PG37 636 aa11.6□□□□□ -0.55
ITSN1-228ENST00000479424 GNAT3A8MTJ3 354 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 NFKBIEO00221 500 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 KCNQ3O43525 872 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 STARD3NLO95772 234 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 FSTL1Q12841 308 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 BICDL1Q6ZP65 573 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 C2CD5Q86YS7 1000 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 TTLL6Q8N841 843 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
ITSN1-228ENST00000479424 ZC3H4Q9UPT8 1303 aaKnown RBP11.59□□□□□ -0.55
ITSN1-228ENST00000479424 POTECB2RU33 542 aa11.58□□□□□ -0.56
ITSN1-228ENST00000479424 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
ITSN1-228ENST00000479424 A1BGP04217 495 aa11.58□□□□□ -0.56
ITSN1-228ENST00000479424 LMNB1P20700 586 aa11.58□□□□□ -0.56
ITSN1-228ENST00000479424 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
ITSN1-228ENST00000479424 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
ITSN1-228ENST00000479424 TBC1D2BQ9UPU7 963 aa11.58□□□□□ -0.56
ITSN1-228ENST00000479424 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.56
ITSN1-228ENST00000479424 GLTPD2A6NH11 291 aa11.57□□□□□ -0.56
ITSN1-228ENST00000479424 H0YIN7 160 aa11.57□□□□□ -0.56
ITSN1-228ENST00000479424 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
ITSN1-228ENST00000479424 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
ITSN1-228ENST00000479424 PRR5LQ6MZQ0 368 aa11.57□□□□□ -0.56
ITSN1-228ENST00000479424 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
ITSN1-228ENST00000479424 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
ITSN1-228ENST00000479424 JMYQ8N9B5 988 aa11.57□□□□□ -0.56
ITSN1-228ENST00000479424 KLRG1Q96E93 195 aa11.57□□□□□ -0.56
ITSN1-228ENST00000479424 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
ITSN1-228ENST00000479424 A0A087WZG4 1122 aa11.56□□□□□ -0.56
ITSN1-228ENST00000479424 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
ITSN1-228ENST00000479424 CAMTA2O94983 1202 aa11.56□□□□□ -0.56
ITSN1-228ENST00000479424 TEFQ10587 303 aa11.56□□□□□ -0.56
ITSN1-228ENST00000479424 TEX13AQ9BXU3 409 aaPredicted RBP11.56□□□□□ -0.56
ITSN1-228ENST00000479424 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
ITSN1-228ENST00000479424 PRKAR2BP31323 418 aa11.55□□□□□ -0.56
ITSN1-228ENST00000479424 FMNL2Q96PY5 1086 aa11.55□□□□□ -0.56
ITSN1-228ENST00000479424 BRIP1Q9BX63 1249 aa11.55□□□□□ -0.56
ITSN1-228ENST00000479424 BTBD11A6QL63 1104 aa11.54□□□□□ -0.56
ITSN1-228ENST00000479424 VEGFAP15692 232 aaPredicted RBP11.54□□□□□ -0.56
ITSN1-228ENST00000479424 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
ITSN1-228ENST00000479424 SMC1BQ8NDV3 1235 aa11.54□□□□□ -0.56
ITSN1-228ENST00000479424 ZNF622Q969S3 477 aaKnown RBP eCLIP11.54□□□□□ -0.56
ITSN1-228ENST00000479424 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
ITSN1-228ENST00000479424 NUP98P52948 1817 aa11.53□□□□□ -0.56
ITSN1-228ENST00000479424 C21orf2O43822 256 aa11.53□□□□□ -0.56
ITSN1-228ENST00000479424 PDE6BP35913 854 aa11.53□□□□□ -0.56
ITSN1-228ENST00000479424 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
ITSN1-228ENST00000479424 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.57
ITSN1-228ENST00000479424 SRGNP10124 158 aa11.52□□□□□ -0.57
ITSN1-228ENST00000479424 MCM10Q7L590 875 aa11.52□□□□□ -0.57
ITSN1-228ENST00000479424 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms