RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 AEBP1Q8IUX7 1158 aa9.14□□□□□ -0.95
VCP-205ENST00000479300 POLR3GLQ9BT43 218 aa9.14□□□□□ -0.95
VCP-205ENST00000479300 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
VCP-205ENST00000479300 KDM2BQ8NHM5 1336 aa9.13□□□□□ -0.95
VCP-205ENST00000479300 AFDNP55196 1824 aaKnown RBP9.13□□□□□ -0.95
VCP-205ENST00000479300 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
VCP-205ENST00000479300 ZNF530Q6P9A1 599 aaPredicted RBP9.13□□□□□ -0.95
VCP-205ENST00000479300 C16orf71Q8IYS4 520 aaPredicted RBP9.13□□□□□ -0.95
VCP-205ENST00000479300 TNS4Q8IZW8 715 aa9.13□□□□□ -0.95
VCP-205ENST00000479300 ZNF219Q9P2Y4 722 aaPredicted RBP9.13□□□□□ -0.95
VCP-205ENST00000479300 DLEC1Q9Y238 1755 aa9.13□□□□□ -0.95
VCP-205ENST00000479300 TIAM2Q8IVF5 1701 aa9.12□□□□□ -0.95
VCP-205ENST00000479300 POTECB2RU33 542 aa9.12□□□□□ -0.95
VCP-205ENST00000479300 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
VCP-205ENST00000479300 CABP4P57796 275 aa9.12□□□□□ -0.95
VCP-205ENST00000479300 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
VCP-205ENST00000479300 SCN11AQ9UI33 1791 aa9.12□□□□□ -0.95
VCP-205ENST00000479300 CARMIL3Q8ND23 1372 aa9.12□□□□□ -0.95
VCP-205ENST00000479300 SOS1Q07889 1333 aaPredicted RBP9.11□□□□□ -0.95
VCP-205ENST00000479300 HSPA1AP0DMV8 641 aaKnown RBP9.11□□□□□ -0.95
VCP-205ENST00000479300 HSPA1BP0DMV9 641 aaKnown RBP9.11□□□□□ -0.95
VCP-205ENST00000479300 EIF4G2P78344 907 aaKnown RBP eCLIP9.11□□□□□ -0.95
VCP-205ENST00000479300 DNAJC10Q8IXB1 793 aa9.11□□□□□ -0.95
VCP-205ENST00000479300 SMC1BQ8NDV3 1235 aa9.11□□□□□ -0.95
VCP-205ENST00000479300 BCL2L12Q9HB09 334 aa9.11□□□□□ -0.95
VCP-205ENST00000479300 NFKBIEO00221 500 aa9.1□□□□□ -0.95
VCP-205ENST00000479300 HSP90AB1P08238 724 aaKnown RBP9.1□□□□□ -0.95
VCP-205ENST00000479300 NFIXQ14938 502 aa9.1□□□□□ -0.95
VCP-205ENST00000479300 PLEKHO1Q53GL0 409 aaPredicted RBP9.1□□□□□ -0.95
VCP-205ENST00000479300 USPL1Q5W0Q7 1092 aa9.1□□□□□ -0.95
VCP-205ENST00000479300 CCDC88AQ3V6T2 1871 aa9.09□□□□□ -0.95
VCP-205ENST00000479300 ANKRD31Q8N7Z5 1873 aa9.09□□□□□ -0.95
VCP-205ENST00000479300 GLTPD2A6NH11 291 aa9.09□□□□□ -0.95
VCP-205ENST00000479300 MTHFSP49914 203 aa9.09□□□□□ -0.95
VCP-205ENST00000479300 MRC1P22897 1456 aa9.08□□□□□ -0.96
VCP-205ENST00000479300 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
VCP-205ENST00000479300 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
VCP-205ENST00000479300 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
VCP-205ENST00000479300 LMNB1P20700 586 aa9.08□□□□□ -0.96
VCP-205ENST00000479300 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
VCP-205ENST00000479300 AMOTQ4VCS5 1084 aa9.08□□□□□ -0.96
VCP-205ENST00000479300 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
VCP-205ENST00000479300 ZBTB1Q9Y2K1 713 aa9.08□□□□□ -0.96
VCP-205ENST00000479300 POTEIP0CG38 1075 aa9.07□□□□□ -0.96
VCP-205ENST00000479300 POTEJP0CG39 1038 aa9.07□□□□□ -0.96
VCP-205ENST00000479300 VEGFAP15692 232 aaPredicted RBP9.07□□□□□ -0.96
VCP-205ENST00000479300 SLC39A6Q13433 755 aa9.07□□□□□ -0.96
VCP-205ENST00000479300 SULT6B1Q6IMI4 303 aa9.07□□□□□ -0.96
VCP-205ENST00000479300 NARFQ9UHQ1 456 aa9.07□□□□□ -0.96
VCP-205ENST00000479300 COL15A1P39059 1388 aa9.07□□□□□ -0.96
VCP-205ENST00000479300 VIRMAQ69YN4 1812 aaKnown RBP9.06□□□□□ -0.96
VCP-205ENST00000479300 SERPINB2P05120 415 aa9.06□□□□□ -0.96
VCP-205ENST00000479300 IL13P35225 146 aa9.06□□□□□ -0.96
VCP-205ENST00000479300 C1orf141Q5JVX7 400 aa9.06□□□□□ -0.96
VCP-205ENST00000479300 SPINK5Q9NQ38 1064 aaPredicted RBP9.06□□□□□ -0.96
VCP-205ENST00000479300 UBR2Q8IWV8 1755 aa9.06□□□□□ -0.96
VCP-205ENST00000479300 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
VCP-205ENST00000479300 ZPR1O75312 459 aa9.05□□□□□ -0.96
VCP-205ENST00000479300 HSPA5P11021 654 aaKnown RBP9.05□□□□□ -0.96
VCP-205ENST00000479300 C2CD5Q86YS7 1000 aa9.05□□□□□ -0.96
VCP-205ENST00000479300 TTLL6Q8N841 843 aa9.05□□□□□ -0.96
VCP-205ENST00000479300 PANK3Q9H999 370 aa9.05□□□□□ -0.96
VCP-205ENST00000479300 SLC52A2Q9HAB3 445 aa9.05□□□□□ -0.96
VCP-205ENST00000479300 DICER1Q9UPY3 1922 aaKnown RBP9.05□□□□□ -0.96
VCP-205ENST00000479300 SCN7AQ01118 1682 aa9.04□□□□□ -0.96
VCP-205ENST00000479300 RNMTO43148 476 aaKnown RBP9.04□□□□□ -0.96
VCP-205ENST00000479300 CCDC24Q8N4L8 307 aa9.04□□□□□ -0.96
VCP-205ENST00000479300 GTF3C3Q9Y5Q9 886 aa9.04□□□□□ -0.96
VCP-205ENST00000479300 FOXN1O15353 648 aa9.03□□□□□ -0.96
VCP-205ENST00000479300 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
VCP-205ENST00000479300 TBC1D9BQ66K14 1250 aa9.03□□□□□ -0.96
VCP-205ENST00000479300 MKRN1Q9UHC7 482 aaKnown RBP9.03□□□□□ -0.96
VCP-205ENST00000479300 SLX4Q8IY92 1834 aa9.03□□□□□ -0.96
VCP-205ENST00000479300 H0YIN7 160 aa9.02□□□□□ -0.97
VCP-205ENST00000479300 C21orf2O43822 256 aa9.02□□□□□ -0.97
VCP-205ENST00000479300 CANXP27824 592 aaKnown RBP9.02□□□□□ -0.97
VCP-205ENST00000479300 EIF5P55010 431 aaKnown RBP9.02□□□□□ -0.97
VCP-205ENST00000479300 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
VCP-205ENST00000479300 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
VCP-205ENST00000479300 CNTNAP1P78357 1384 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 DDNO94850 711 aaPredicted RBP9.01□□□□□ -0.97
VCP-205ENST00000479300 HMOX1P09601 288 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 CACNA1SQ13698 1873 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
VCP-205ENST00000479300 ERFEQ4G0M1 354 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 PRR5LQ6MZQ0 368 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 CHADLQ6NUI6 762 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 MORC1Q86VD1 984 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 PASKQ96RG2 1323 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 LTBP3Q9NS15 1303 aa9.01□□□□□ -0.97
VCP-205ENST00000479300 SIPA1L3O60292 1781 aaPredicted RBP9□□□□□ -0.97
VCP-205ENST00000479300 ADAMTSL1Q8N6G6 1762 aa9□□□□□ -0.97
VCP-205ENST00000479300 ARFGEF2Q9Y6D5 1785 aa9□□□□□ -0.97
VCP-205ENST00000479300 VSIG10Q8N0Z9 540 aa9□□□□□ -0.97
VCP-205ENST00000479300 ZNF622Q969S3 477 aaKnown RBP eCLIP9□□□□□ -0.97
VCP-205ENST00000479300 BRIP1Q9BX63 1249 aa9□□□□□ -0.97
VCP-205ENST00000479300 ITGBL1O95965 494 aaPredicted RBP8.99□□□□□ -0.97
VCP-205ENST00000479300 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
VCP-205ENST00000479300 C7orf43Q8WVR3 580 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms