RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 MEIS3Q99687 375 aa34.05■■■■□ 3.04
CHKB-208ENST00000479003 EIF5BO60841 1220 aaKnown RBP34.04■■■■□ 3.04
CHKB-208ENST00000479003 DDIT3P35638 169 aa34.04■■■■□ 3.04
CHKB-208ENST00000479003 TTC22Q5TAA0 569 aa34.04■■■■□ 3.04
CHKB-208ENST00000479003 MCM4P33991 863 aa34.04■■■■□ 3.04
CHKB-208ENST00000479003 DISP2A7MBM2 1401 aa34.04■■■■□ 3.04
CHKB-208ENST00000479003 SOS1Q07889 1333 aaPredicted RBP34.04■■■■□ 3.04
CHKB-208ENST00000479003 DDX54Q8TDD1 881 aaKnown RBP34.03■■■■□ 3.04
CHKB-208ENST00000479003 CCDC30Q5VVM6 783 aa34.01■■■■□ 3.03
CHKB-208ENST00000479003 G2E3Q7L622 706 aa34.01■■■■□ 3.03
CHKB-208ENST00000479003 SLIT2O94813 1529 aa34.01■■■■□ 3.03
CHKB-208ENST00000479003 SLC39A6Q13433 755 aa34■■■■□ 3.03
CHKB-208ENST00000479003 BRPF3Q9ULD4 1205 aa34■■■■□ 3.03
CHKB-208ENST00000479003 CCT4P50991 539 aaKnown RBP34■■■■□ 3.03
CHKB-208ENST00000479003 NWD2Q9ULI1 1742 aa33.99■■■■□ 3.03
CHKB-208ENST00000479003 C16orf71Q8IYS4 520 aaPredicted RBP33.99■■■■□ 3.03
CHKB-208ENST00000479003 HDGFL1Q5TGJ6 251 aa33.98■■■■□ 3.03
CHKB-208ENST00000479003 STK31Q9BXU1 1019 aa33.98■■■■□ 3.03
CHKB-208ENST00000479003 ZNF790Q6PG37 636 aa33.98■■■■□ 3.03
CHKB-208ENST00000479003 HEG1Q9ULI3 1381 aa33.98■■■■□ 3.03
CHKB-208ENST00000479003 WNK3Q9BYP7 1800 aa33.97■■■■□ 3.03
CHKB-208ENST00000479003 CACNA1FO60840 1977 aa33.97■■■■□ 3.03
CHKB-208ENST00000479003 HOXB7P09629 217 aa33.97■■■■□ 3.03
CHKB-208ENST00000479003 NKX1-1Q15270 411 aaPredicted RBP33.97■■■■□ 3.03
CHKB-208ENST00000479003 EIF2S2P20042 333 aaKnown RBP33.95■■■■□ 3.03
CHKB-208ENST00000479003 CABP4P57796 275 aa33.95■■■■□ 3.03
CHKB-208ENST00000479003 CIZ1Q9ULV3 898 aaPredicted RBP33.95■■■■□ 3.03
CHKB-208ENST00000479003 SPATA31A1Q5TZJ5 1347 aa33.95■■■■□ 3.03
CHKB-208ENST00000479003 HMMRO75330 724 aa33.94■■■■□ 3.02
CHKB-208ENST00000479003 PRAMEF22A3QJZ6 481 aa33.94■■■■□ 3.02
CHKB-208ENST00000479003 GIGYF1O75420 1035 aaPredicted RBP33.94■■■■□ 3.02
CHKB-208ENST00000479003 F6X3S4 739 aa33.93■■■■□ 3.02
CHKB-208ENST00000479003 HSPA1LP34931 641 aa33.93■■■■□ 3.02
CHKB-208ENST00000479003 OTUD7AQ8TE49 926 aaPredicted RBP33.93■■■■□ 3.02
CHKB-208ENST00000479003 C8orf37Q96NL8 207 aa33.93■■■■□ 3.02
CHKB-208ENST00000479003 LRP6O75581 1613 aa33.93■■■■□ 3.02
CHKB-208ENST00000479003 N4BP2Q86UW6 1770 aaPredicted RBP33.92■■■■□ 3.02
CHKB-208ENST00000479003 SLC4A10Q6U841 1118 aa33.92■■■■□ 3.02
CHKB-208ENST00000479003 TOGARAM1Q9Y4F4 1720 aa33.92■■■■□ 3.02
CHKB-208ENST00000479003 SMARCA5O60264 1052 aaPredicted RBP33.9■■■■□ 3.02
CHKB-208ENST00000479003 CD2BP2O95400 341 aaKnown RBP33.9■■■■□ 3.02
CHKB-208ENST00000479003 K7ELQ4 463 aaPredicted RBP33.89■■■■□ 3.02
CHKB-208ENST00000479003 FLIIQ13045 1269 aa33.89■■■■□ 3.02
CHKB-208ENST00000479003 SPATA31A5Q5VU36 1347 aa33.89■■■■□ 3.02
CHKB-208ENST00000479003 SPATA31A6Q5VVP1 1343 aa33.89■■■■□ 3.02
CHKB-208ENST00000479003 SPATA31A7Q8IWB4 1347 aa33.89■■■■□ 3.02
CHKB-208ENST00000479003 ERVV-2B6SEH9 535 aa33.89■■■■□ 3.02
CHKB-208ENST00000479003 CHPF2Q9P2E5 772 aa33.88■■■■□ 3.01
CHKB-208ENST00000479003 ZNF496Q96IT1 587 aaPredicted RBP33.88■■■■□ 3.01
CHKB-208ENST00000479003 NGLY1Q96IV0 654 aa33.88■■■■□ 3.01
CHKB-208ENST00000479003 C5P01031 1676 aa33.87■■■■□ 3.01
CHKB-208ENST00000479003 RBM42Q9BTD8 480 aaKnown RBP33.87■■■■□ 3.01
CHKB-208ENST00000479003 GNAI2P04899 355 aa33.86■■■■□ 3.01
CHKB-208ENST00000479003 SDSP20132 328 aa33.86■■■■□ 3.01
CHKB-208ENST00000479003 TTC5Q8N0Z6 440 aa33.86■■■■□ 3.01
CHKB-208ENST00000479003 THRAP3Q9Y2W1 955 aaKnown RBP33.86■■■■□ 3.01
CHKB-208ENST00000479003 BCL9LQ86UU0 1499 aa33.86■■■■□ 3.01
CHKB-208ENST00000479003 DDX11L8A8MPP1 907 aa33.86■■■■□ 3.01
CHKB-208ENST00000479003 CCDC9Q9Y3X0 531 aaKnown RBP33.86■■■■□ 3.01
CHKB-208ENST00000479003 TNS2Q63HR2 1409 aa33.85■■■■□ 3.01
CHKB-208ENST00000479003 UNC5CLQ8IV45 518 aa33.85■■■■□ 3.01
CHKB-208ENST00000479003 PHAXQ9H814 394 aaKnown RBP33.85■■■■□ 3.01
CHKB-208ENST00000479003 EXOC5O00471 708 aa33.85■■■■□ 3.01
CHKB-208ENST00000479003 USP26Q9BXU7 913 aa33.85■■■■□ 3.01
CHKB-208ENST00000479003 APBB1O00213 710 aa33.84■■■■□ 3.01
CHKB-208ENST00000479003 L1TD1Q5T7N2 865 aaKnown RBP33.84■■■■□ 3.01
CHKB-208ENST00000479003 OSBPL3Q9H4L5 887 aa33.84■■■■□ 3.01
CHKB-208ENST00000479003 FKBP5Q13451 457 aaPredicted RBP33.83■■■■□ 3.01
CHKB-208ENST00000479003 ANXA1P04083 346 aa33.83■■■■□ 3.01
CHKB-208ENST00000479003 RABEP1Q15276 862 aa33.83■■■■□ 3.01
CHKB-208ENST00000479003 GLI3P10071 1580 aa33.83■■■■□ 3.01
CHKB-208ENST00000479003 TRAK2O60296 914 aa33.82■■■■□ 3
CHKB-208ENST00000479003 RAB3GAP1Q15042 981 aa33.82■■■■□ 3
CHKB-208ENST00000479003 CASC1Q6TDU7 716 aa33.82■■■■□ 3
CHKB-208ENST00000479003 PXDNLA1KZ92 1463 aa33.82■■■■□ 3
CHKB-208ENST00000479003 GNAI3P08754 354 aa33.81■■■■□ 3
CHKB-208ENST00000479003 CDCA7Q9BWT1 371 aaPredicted RBP33.81■■■■□ 3
CHKB-208ENST00000479003 CHMP4AQ9BY43 222 aa33.81■■■■□ 3
CHKB-208ENST00000479003 TNPO1Q92973 898 aaKnown RBP33.8■■■■□ 3
CHKB-208ENST00000479003 PAPPAQ13219 1627 aa33.8■■■■□ 3
CHKB-208ENST00000479003 FNBP4Q8N3X1 1017 aaPredicted RBP33.79■■■■□ 3
CHKB-208ENST00000479003 FMNL2Q96PY5 1086 aa33.79■■■■□ 3
CHKB-208ENST00000479003 HSP90AA1P07900 732 aaKnown RBP33.79■■■■□ 3
CHKB-208ENST00000479003 PROSER3Q2NL68 480 aa33.79■■■■□ 3
CHKB-208ENST00000479003 DBF4Q9UBU7 674 aaPredicted RBP33.79■■■■□ 3
CHKB-208ENST00000479003 UBR2Q8IWV8 1755 aa33.78■■■■□ 3
CHKB-208ENST00000479003 TUBGCP6Q96RT7 1819 aa33.78■■■■□ 3
CHKB-208ENST00000479003 BARGINQ6ZT62 677 aa33.77■■■■□ 3
CHKB-208ENST00000479003 PDE1AP54750 535 aa33.76■■■■□ 3
CHKB-208ENST00000479003 DDB1Q16531 1140 aa33.76■■■■□ 3
CHKB-208ENST00000479003 TMOD3Q9NYL9 352 aa33.76■■■■□ 3
CHKB-208ENST00000479003 SNRPA1P09661 255 aaKnown RBP33.76■■■□□ 2.99
CHKB-208ENST00000479003 RTN4Q9NQC3 1192 aaKnown RBP33.76■■■□□ 2.99
CHKB-208ENST00000479003 KCPQ6ZWJ8 1503 aa33.75■■■□□ 2.99
CHKB-208ENST00000479003 ATP8B2P98198 1209 aa33.75■■■□□ 2.99
CHKB-208ENST00000479003 VPS72Q15906 364 aa33.75■■■□□ 2.99
CHKB-208ENST00000479003 ITGB4P16144 1822 aa33.75■■■□□ 2.99
CHKB-208ENST00000479003 FSD2A1L4K1 749 aa33.74■■■□□ 2.99
CHKB-208ENST00000479003 GBP4Q96PP9 640 aa33.74■■■□□ 2.99
CHKB-208ENST00000479003 ANO8Q9HCE9 1232 aaPredicted RBP33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms