RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 KDRP35968 1356 aa17.14■□□□□ 0.33
CCDC78-210ENST00000478979 NUCB2P80303 420 aa17.13■□□□□ 0.33
CCDC78-210ENST00000478979 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
CCDC78-210ENST00000478979 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
CCDC78-210ENST00000478979 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
CCDC78-210ENST00000478979 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
CCDC78-210ENST00000478979 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
CCDC78-210ENST00000478979 UTP14CQ5TAP6 766 aaKnown RBP17.13■□□□□ 0.33
CCDC78-210ENST00000478979 NALCNQ8IZF0 1738 aa17.13■□□□□ 0.33
CCDC78-210ENST00000478979 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
CCDC78-210ENST00000478979 RABEP1Q15276 862 aa17.12■□□□□ 0.33
CCDC78-210ENST00000478979 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
CCDC78-210ENST00000478979 GPT2Q8TD30 523 aa17.12■□□□□ 0.33
CCDC78-210ENST00000478979 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-210ENST00000478979 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-210ENST00000478979 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
CCDC78-210ENST00000478979 MX1P20591 662 aa17.12■□□□□ 0.33
CCDC78-210ENST00000478979 ORAI2Q96SN7 254 aa17.12■□□□□ 0.33
CCDC78-210ENST00000478979 ERC2O15083 957 aa17.11■□□□□ 0.33
CCDC78-210ENST00000478979 NEK4P51957 841 aa17.11■□□□□ 0.33
CCDC78-210ENST00000478979 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
CCDC78-210ENST00000478979 DTNBO60941 627 aa17.11■□□□□ 0.33
CCDC78-210ENST00000478979 SURF6O75683 361 aaKnown RBP17.11■□□□□ 0.33
CCDC78-210ENST00000478979 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
CCDC78-210ENST00000478979 SYCE3A1L190 88 aa17.1■□□□□ 0.33
CCDC78-210ENST00000478979 GNAI3P08754 354 aa17.1■□□□□ 0.33
CCDC78-210ENST00000478979 REC8O95072 547 aa17.1■□□□□ 0.33
CCDC78-210ENST00000478979 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-210ENST00000478979 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
CCDC78-210ENST00000478979 NBPF7P0C2Y1 421 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-210ENST00000478979 TEFQ10587 303 aa17.1■□□□□ 0.33
CCDC78-210ENST00000478979 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
CCDC78-210ENST00000478979 TMEM63CQ9P1W3 806 aa17.1■□□□□ 0.33
CCDC78-210ENST00000478979 ST18O60284 1047 aa17.09■□□□□ 0.33
CCDC78-210ENST00000478979 RNF214Q8ND24 703 aa17.09■□□□□ 0.33
CCDC78-210ENST00000478979 PALD1Q9ULE6 856 aa17.09■□□□□ 0.33
CCDC78-210ENST00000478979 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
CCDC78-210ENST00000478979 PI4KAP2A4QPH2 592 aa17.09■□□□□ 0.33
CCDC78-210ENST00000478979 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
CCDC78-210ENST00000478979 PI4KAP1Q8N8J0 262 aa17.09■□□□□ 0.33
CCDC78-210ENST00000478979 ATP8B2P98198 1209 aa17.08■□□□□ 0.33
CCDC78-210ENST00000478979 TSC1Q92574 1164 aa17.08■□□□□ 0.33
CCDC78-210ENST00000478979 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.32
CCDC78-210ENST00000478979 SRGAP3O43295 1099 aa17.08■□□□□ 0.32
CCDC78-210ENST00000478979 FGD1P98174 961 aa17.08■□□□□ 0.32
CCDC78-210ENST00000478979 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
CCDC78-210ENST00000478979 MYRIPQ8NFW9 859 aa17.07■□□□□ 0.32
CCDC78-210ENST00000478979 BTBD11A6QL63 1104 aa17.07■□□□□ 0.32
CCDC78-210ENST00000478979 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
CCDC78-210ENST00000478979 KIAA2012Q0VF49 1180 aa17.07■□□□□ 0.32
CCDC78-210ENST00000478979 DNTTIP2Q5QJE6 756 aaKnown RBP17.07■□□□□ 0.32
CCDC78-210ENST00000478979 IL25Q9H293 177 aa17.07■□□□□ 0.32
CCDC78-210ENST00000478979 OS9Q13438 667 aaPredicted RBP17.07■□□□□ 0.32
CCDC78-210ENST00000478979 ANKLE2Q86XL3 938 aa17.07■□□□□ 0.32
CCDC78-210ENST00000478979 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
CCDC78-210ENST00000478979 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
CCDC78-210ENST00000478979 SRCIN1Q9C0H9 1055 aa17.06■□□□□ 0.32
CCDC78-210ENST00000478979 ARHGAP23Q9P227 1491 aa17.06■□□□□ 0.32
CCDC78-210ENST00000478979 ZC3H6P61129 1189 aaKnown RBP17.06■□□□□ 0.32
CCDC78-210ENST00000478979 SLIT1O75093 1534 aa17.06■□□□□ 0.32
CCDC78-210ENST00000478979 CBX1P83916 185 aa17.05■□□□□ 0.32
CCDC78-210ENST00000478979 ZNF710Q8N1W2 664 aa17.05■□□□□ 0.32
CCDC78-210ENST00000478979 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC78-210ENST00000478979 IP6K1Q92551 441 aa17.05■□□□□ 0.32
CCDC78-210ENST00000478979 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
CCDC78-210ENST00000478979 PROSER3Q2NL68 480 aa17.04■□□□□ 0.32
CCDC78-210ENST00000478979 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
CCDC78-210ENST00000478979 HTATSF1O43719 755 aaKnown RBP17.04■□□□□ 0.32
CCDC78-210ENST00000478979 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
CCDC78-210ENST00000478979 ZDHHC9Q9Y397 364 aa17.04■□□□□ 0.32
CCDC78-210ENST00000478979 CHMLP26374 656 aa17.03■□□□□ 0.32
CCDC78-210ENST00000478979 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-210ENST00000478979 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
CCDC78-210ENST00000478979 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
CCDC78-210ENST00000478979 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
CCDC78-210ENST00000478979 PA2G4Q9UQ80 394 aaKnown RBP17.02■□□□□ 0.32
CCDC78-210ENST00000478979 NWD1Q149M9 1564 aa17.02■□□□□ 0.31
CCDC78-210ENST00000478979 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.31
CCDC78-210ENST00000478979 MPNDQ8N594 471 aa17.02■□□□□ 0.31
CCDC78-210ENST00000478979 GCP02774 474 aa17.01■□□□□ 0.31
CCDC78-210ENST00000478979 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
CCDC78-210ENST00000478979 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
CCDC78-210ENST00000478979 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
CCDC78-210ENST00000478979 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
CCDC78-210ENST00000478979 FAM177BA6PVY3 158 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 SLC39A6Q13433 755 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 RHPN1Q8TCX5 695 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 ATP2B3Q16720 1220 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 PRIMPOLQ96LW4 560 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 GTPBP4Q9BZE4 634 aaKnown RBP17■□□□□ 0.31
CCDC78-210ENST00000478979 OSBPL3Q9H4L5 887 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 C9orf78Q9NZ63 289 aaPredicted RBP17■□□□□ 0.31
CCDC78-210ENST00000478979 PPP4R3BQ5MIZ7 849 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
CCDC78-210ENST00000478979 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 SPG7Q9UQ90 795 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
CCDC78-210ENST00000478979 RGPD2P0DJD1 1756 aa16.99■□□□□ 0.31
CCDC78-210ENST00000478979 LTN1O94822 1766 aa16.99■□□□□ 0.31
CCDC78-210ENST00000478979 SALL3Q9BXA9 1300 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms